BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0312.p (264 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGc2580 [E] COG1126 ABC-type polar amino acid transport system, ... 298 1e-80 AGl381 [E] COG1126 ABC-type polar amino acid transport system, A... 296 4e-80 SMa0508 [E] COG1126 ABC-type polar amino acid transport system, ... 286 4e-77 AGpA331 [E] COG1126 ABC-type polar amino acid transport system, ... 281 8e-76 YPO3254 [E] COG1126 ABC-type polar amino acid transport system, ... 270 3e-72 AGc2571 [E] COG1126 ABC-type polar amino acid transport system, ... 266 2e-71 AGl402 [E] COG1126 ABC-type polar amino acid transport system, A... 265 1e-70 lin0841 [E] COG1126 ABC-type polar amino acid transport system, ... 264 1e-70 NMA0900 [E] COG1126 ABC-type polar amino acid transport system, ... 262 7e-70 SMb20266 [E] COG1126 ABC-type polar amino acid transport system,... 261 8e-70 >AGc2580 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 243 Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 149/237 (62%), Positives = 184/237 (77%), Gaps = 1/237 (0%) Query: 26 IVKLDQVYKSFGDNQVLKGVSFEVARGEMIAIIGASGSGKSTALRCIDRLETIDSGSIEV 85 +V +DQV+K +G +VLKGVS V G+++AIIG SGSGKST LRCI+ LE SG+I Sbjct: 3 VVTIDQVHKRYGALEVLKGVSLNVEAGQVVAIIGRSGSGKSTMLRCINGLEEFQSGNITA 62 Query: 86 AGIRVDDPQVDLHKLRREVGIVFQSYNLFPHLNVLENVMLALRHVKQQDKAEARRVALAA 145 AG RV+ Q L +LR++VGIVFQSYNLFPHL V EN+ML+ + + +A+A +A Sbjct: 63 AGHRVEQDQTKLRQLRKDVGIVFQSYNLFPHLTVGENIMLSPKITQDVARADADVLARKV 122 Query: 146 LAQVGLDEKANAYPEQLSGGQQQRVAIARSLAMAPKVMLFDEVTSALDPQLTGEVLRVME 205 LAQVGL EK +AYP+ LSGGQQQRVAIARSLAM PKVMLFDEVTSALDP+LTGEVL VME Sbjct: 123 LAQVGLAEKFDAYPDMLSGGQQQRVAIARSLAMRPKVMLFDEVTSALDPELTGEVLLVME 182 Query: 206 DLAANGMTMLLVTHEMNFAKRVADRIIYMHQGRVWEVGPG-EMLDHPHTPELQAFLA 261 LA GMTMLLVTHEM+FA+ VA ++MHQG++WE+G ++ + P TPELQAFL+ Sbjct: 183 QLAREGMTMLLVTHEMSFARSVAHVTVFMHQGKIWEMGASKQLFEKPQTPELQAFLS 239 >AGl381 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 243 Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 150/239 (62%), Positives = 182/239 (76%), Gaps = 1/239 (0%) Query: 27 VKLDQVYKSFGDNQVLKGVSFEVARGEMIAIIGASGSGKSTALRCIDRLETIDSGSIEVA 86 V ++ V+KSFG +VLKGVS V RGE+ A+IG SGSGKST LRC++ LE I+SG IE+A Sbjct: 4 VIVENVHKSFGALEVLKGVSLTVGRGEVFALIGRSGSGKSTLLRCMNGLEKINSGRIEIA 63 Query: 87 GIRVDDPQVDLHKLRREVGIVFQSYNLFPHLNVLENVMLALRHVKQQDKAEARRVALAAL 146 G + L KLR +VGIVFQSYNLFPHL V EN+MLA R VK K+E + +A L Sbjct: 64 GHALGGDATALRKLRTDVGIVFQSYNLFPHLTVGENIMLAPRIVKDVAKSETKDIAREVL 123 Query: 147 AQVGLDEKANAYPEQLSGGQQQRVAIARSLAMAPKVMLFDEVTSALDPQLTGEVLRVMED 206 VGL EK ++YP+QLSGGQQQRVAIARSLAM PKVMLFDEVTSALDP+LT EVL VME+ Sbjct: 124 QLVGLSEKFDSYPDQLSGGQQQRVAIARSLAMRPKVMLFDEVTSALDPELTEEVLTVMEN 183 Query: 207 LAANGMTMLLVTHEMNFAKRVADRIIYMHQGRVWEVG-PGEMLDHPHTPELQAFLAADL 264 LA GMTM+LVTHEM FA+RVA I+MH+G++WE G E+ +P TPEL+ F+ AD+ Sbjct: 184 LAKGGMTMILVTHEMAFARRVATETIFMHKGKIWEQGRSAELFANPQTPELRQFVKADV 242 >SMa0508 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Sme Sinorhizobium meliloti Length = 243 Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 148/240 (61%), Positives = 178/240 (74%), Gaps = 1/240 (0%) Query: 26 IVKLDQVYKSFGDNQVLKGVSFEVARGEMIAIIGASGSGKSTALRCIDRLETIDSGSIEV 85 +V + KSFG QVLKGVS V GE++A+IG SGSGKST LRC++ LE++DSG IEV Sbjct: 3 VVVAKNIRKSFGGLQVLKGVSLTVEGGEVVALIGGSGSGKSTFLRCLNGLESVDSGEIEV 62 Query: 86 AGIRVDDPQVDLHKLRREVGIVFQSYNLFPHLNVLENVMLALRHVKQQDKAEARRVALAA 145 AG R+ +L +LRR+VGIVFQSYNLFPHL EN+MLA VK K AR A Sbjct: 63 AGHRMSRKPAELRRLRRDVGIVFQSYNLFPHLTAGENIMLAPVQVKGIGKDAARSEAKRC 122 Query: 146 LAQVGLDEKANAYPEQLSGGQQQRVAIARSLAMAPKVMLFDEVTSALDPQLTGEVLRVME 205 L+ VGL ++ AYP+ LSGGQQQRVAIARSLAM PKV+LFDEVTSALDP+LTGEVL V+E Sbjct: 123 LSLVGLGDRFEAYPDMLSGGQQQRVAIARSLAMQPKVLLFDEVTSALDPELTGEVLAVIE 182 Query: 206 DLAANGMTMLLVTHEMNFAKRVADRIIYMHQGRVWEVGP-GEMLDHPHTPELQAFLAADL 264 LA +GMTM+LVTHEM FA+RVA+R I+M G + E GP E P TPEL+AFL A++ Sbjct: 183 KLARDGMTMILVTHEMGFARRVANRTIFMRDGIIHEEGPSAEFFSSPKTPELRAFLHAEV 242 >AGpA331 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 243 Score = 281 bits (720), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 138/237 (58%), Positives = 182/237 (76%), Gaps = 1/237 (0%) Query: 26 IVKLDQVYKSFGDNQVLKGVSFEVARGEMIAIIGASGSGKSTALRCIDRLETIDSGSIEV 85 +V++ V K++G +VLKGVS +V +GE++ IIG SGSGKST LRCI+ LETI+SG I + Sbjct: 3 LVEIKNVRKNYGPLEVLKGVSLDVEKGEIVTIIGRSGSGKSTLLRCINALETINSGEILL 62 Query: 86 AGIRVDDPQVDLHKLRREVGIVFQSYNLFPHLNVLENVMLALRHVKQQDKAEARRVALAA 145 G V L ++R++VGIVFQ++NLFPH+ + +NV LA + DK AR +AL+ Sbjct: 63 EGQPVSANMDGLRQMRQKVGIVFQAFNLFPHMTIEKNVTLAPVLTGRTDKRGARELALSV 122 Query: 146 LAQVGLDEKANAYPEQLSGGQQQRVAIARSLAMAPKVMLFDEVTSALDPQLTGEVLRVME 205 L +VGL +K AYPEQLSGGQQQRVAIAR LAM+P +MLFDEVTSALDP+L GEVL+VME Sbjct: 123 LERVGLADKLKAYPEQLSGGQQQRVAIARCLAMSPHLMLFDEVTSALDPELVGEVLKVME 182 Query: 206 DLAANGMTMLLVTHEMNFAKRVADRIIYMHQGRVWEVG-PGEMLDHPHTPELQAFLA 261 ++AA GMTM+LVTHEM+FA+ VA ++++MHQGRVWE G P + P TPEL++F+ Sbjct: 183 EMAAQGMTMVLVTHEMSFARNVATKLVFMHQGRVWEQGDPKRLFADPQTPELKSFIG 239 >YPO3254 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Ype Yersinia pestis Length = 248 Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 129/238 (54%), Positives = 174/238 (73%), Gaps = 1/238 (0%) Query: 26 IVKLDQVYKSFGDNQVLKGVSFEVARGEMIAIIGASGSGKSTALRCIDRLETIDSGSIEV 85 ++ ++QV K +G N VLKGV ++ GE+I+IIG SGSGKST LRC++ LE GSI++ Sbjct: 3 LITINQVQKYYGKNHVLKGVDLDIEIGEVISIIGRSGSGKSTLLRCMNGLEDYQDGSIKL 62 Query: 86 AGIRVDDPQVDLHKLRREVGIVFQSYNLFPHLNVLENVMLALRHVKQQDKAEARRVALAA 145 G+ V + ++ R VG+VFQ++NLFPH+ LENVMLA R V ++ E R +A Sbjct: 63 GGMTVTNRDSQAREISRSVGMVFQNFNLFPHMTALENVMLAPRRVLKKGAIECRELAAQM 122 Query: 146 LAQVGLDEKANAYPEQLSGGQQQRVAIARSLAMAPKVMLFDEVTSALDPQLTGEVLRVME 205 L +VGL ++ + YP LSGGQQQRVAIAR+LAM PKV+L DE+TSALDP+L GEVL+V+E Sbjct: 123 LEKVGLADRVDYYPANLSGGQQQRVAIARALAMEPKVLLCDEITSALDPELVGEVLKVLE 182 Query: 206 DLAANGMTMLLVTHEMNFAKRVADRIIYMHQGRVWEVGPGE-MLDHPHTPELQAFLAA 262 LAA GMT++LVTHEMNFA+ V DR+++MHQGRVWE G + P T EL+ F+++ Sbjct: 183 QLAAEGMTLILVTHEMNFAREVGDRVVFMHQGRVWEQGESRALFADPQTRELKQFISS 240 >AGc2571 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 244 Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 133/237 (56%), Positives = 176/237 (74%), Gaps = 1/237 (0%) Query: 26 IVKLDQVYKSFGDNQVLKGVSFEVARGEMIAIIGASGSGKSTALRCIDRLETIDSGSIEV 85 ++++ +V KS+G N+VLKG++ +V GE+IAIIG SGSGKST LRCI+ LETI +GSI V Sbjct: 3 LIEITEVRKSYGSNEVLKGINLDVEPGEVIAIIGKSGSGKSTLLRCINGLETISAGSISV 62 Query: 86 AGIRVDDPQVDLHKLRREVGIVFQSYNLFPHLNVLENVMLALRHVKQQDKAEARRVALAA 145 AG ++ D + L LR +VG++FQ +NLFPH V NVML+ VK+ K EA VA Sbjct: 63 AGAQLLDDDLHLKALRLKVGMIFQQFNLFPHQTVGGNVMLSQTVVKKTPKPEAEAVARTM 122 Query: 146 LAQVGLDEKANAYPEQLSGGQQQRVAIARSLAMAPKVMLFDEVTSALDPQLTGEVLRVME 205 L +VGL K +AYP++LSGGQQQRVAIAR+LAM P +L DE+TSALDP+L EVL V+ Sbjct: 123 LERVGLAHKFDAYPDELSGGQQQRVAIARALAMQPIALLCDEITSALDPELVSEVLAVVR 182 Query: 206 DLAANGMTMLLVTHEMNFAKRVADRIIYMHQGRVWEVG-PGEMLDHPHTPELQAFLA 261 +LA GMT+L+VTHEM FA+ V R+++MH+GRV E+G P E+ +P TPEL+ FL Sbjct: 183 ELAGEGMTLLMVTHEMKFARDVCSRVVFMHEGRVHEIGPPEEVFSNPATPELKQFLG 239 >AGl402 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 240 Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 132/238 (55%), Positives = 170/238 (71%), Gaps = 1/238 (0%) Query: 26 IVKLDQVYKSFGDNQVLKGVSFEVARGEMIAIIGASGSGKSTALRCIDRLETIDSGSIEV 85 +++++ V KSFG +VLKG++ V +GE++ IIG SGSGKST L CI+ LE IDSG I + Sbjct: 1 MIEIENVRKSFGPLEVLKGINLTVNKGEVVTIIGGSGSGKSTLLTCINGLEPIDSGKIAI 60 Query: 86 AGIRVDDPQVDLHKLRREVGIVFQSYNLFPHLNVLENVMLALRHVKQQDKAEARRVALAA 145 G V DL+KLRR+VGIVFQ +N FPHL VLENVMLA R V K +A +A+ Sbjct: 61 DGTEVHAKSTDLNKLRRKVGIVFQQWNAFPHLTVLENVMLAPRKVLGISKEKAEEIAVKQ 120 Query: 146 LAQVGLDEKANAYPEQLSGGQQQRVAIARSLAMAPKVMLFDEVTSALDPQLTGEVLRVME 205 L VGL EK YP ++SGGQQQR+AIAR+LAM+P+ MLFDEVTSALDP L GEVL ++ Sbjct: 121 LTHVGLAEKLKVYPNRMSGGQQQRMAIARALAMSPEYMLFDEVTSALDPMLVGEVLDTLK 180 Query: 206 DLAANGMTMLLVTHEMNFAKRVADRIIYMHQGRVWEVG-PGEMLDHPHTPELQAFLAA 262 LA GMTM+ VTHEM FA+ V++R+ + HQG + E+G P ++ P PE Q FLA+ Sbjct: 181 MLADEGMTMICVTHEMAFARDVSNRVAFFHQGVMAEIGTPDQLFGAPQHPETQKFLAS 238 >lin0841 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Lin Listeria innocua Length = 242 Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 127/235 (54%), Positives = 172/235 (73%), Gaps = 1/235 (0%) Query: 27 VKLDQVYKSFGDNQVLKGVSFEVARGEMIAIIGASGSGKSTALRCIDRLETIDSGSIEVA 86 +K+ + KSFG N+VLKG+ EV GE++ +IG SGSGKST LRC++ LE I +G + V Sbjct: 4 LKVTGLKKSFGANEVLKGIDIEVKEGEVVCVIGPSGSGKSTFLRCMNNLEEITAGEVVVD 63 Query: 87 GIRVDDPQVDLHKLRREVGIVFQSYNLFPHLNVLENVMLALRHVKQQDKAEARRVALAAL 146 + D +VD++K+R +G+VFQ +NLFPHL+VLEN+ LA +K+ DK A+ AL L Sbjct: 64 DFNITDKKVDINKVRENIGMVFQHFNLFPHLSVLENITLAPVELKKMDKEAAKSNALRLL 123 Query: 147 AQVGLDEKANAYPEQLSGGQQQRVAIARSLAMAPKVMLFDEVTSALDPQLTGEVLRVMED 206 QVGL EKA+ +P QLSGGQ+QRVAIAR+LAM P +MLFDE TSALDP++ GEVL VM++ Sbjct: 124 EQVGLKEKADEFPNQLSGGQKQRVAIARALAMDPDIMLFDEPTSALDPEMVGEVLGVMKE 183 Query: 207 LAANGMTMLLVTHEMNFAKRVADRIIYMHQGRVWEVG-PGEMLDHPHTPELQAFL 260 LA +GMTM++VTHEM FA+ V DR+I+M G + E G P ++ D+P +FL Sbjct: 184 LAKDGMTMMIVTHEMGFAREVGDRVIFMDGGYIVEEGKPADIFDNPTNERTISFL 238 >NMA0900 [E] COG1126 ABC-type polar amino acid transport system, ATPase component NmA Neisseria meningitidis Z2491 Length = 242 Score = 262 bits (669), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 126/236 (53%), Positives = 172/236 (72%), Gaps = 1/236 (0%) Query: 26 IVKLDQVYKSFGDNQVLKGVSFEVARGEMIAIIGASGSGKSTALRCIDRLETIDSGSIEV 85 ++K V+K F D V+ GV+ E+ +GE++ + G SGSGKST +R +++LE+I+SG I V Sbjct: 1 MIKFKNVHKHFKDLHVINGVNLEIKKGEVVVVCGPSGSGKSTLIRTVNQLESIESGEIWV 60 Query: 86 AGIRVDDPQVDLHKLRREVGIVFQSYNLFPHLNVLENVMLALRHVKQQDKAEARRVALAA 145 G+ V DP+ DL+K+R EVG VFQS+NL+PHL VLEN+ LA VK Q+ +A + A+ Sbjct: 61 DGVNVADPKTDLNKIREEVGFVFQSFNLYPHLTVLENITLAPMKVKGQNAEQAEKKAMEL 120 Query: 146 LAQVGLDEKANAYPEQLSGGQQQRVAIARSLAMAPKVMLFDEVTSALDPQLTGEVLRVME 205 L +VGL K +A+P QLSGGQQQRVAIAR LAM P+VMLFDE TSALDP++ GEVL+VM+ Sbjct: 121 LERVGLAHKKDAFPSQLSGGQQQRVAIARGLAMEPRVMLFDEPTSALDPEMVGEVLKVMK 180 Query: 206 DLAANGMTMLLVTHEMNFAKRVADRIIYMHQGRVWE-VGPGEMLDHPHTPELQAFL 260 DLA +GMTM+ VTHEM FA+ VADR+I++ +G++ E P +P + FL Sbjct: 181 DLAESGMTMMCVTHEMGFAREVADRVIFVDKGQILEDETPEAFFTNPKHERAKQFL 236 >SMb20266 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Sme Sinorhizobium meliloti Length = 240 Score = 261 bits (668), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 131/238 (55%), Positives = 168/238 (70%), Gaps = 1/238 (0%) Query: 26 IVKLDQVYKSFGDNQVLKGVSFEVARGEMIAIIGASGSGKSTALRCIDRLETIDSGSIEV 85 +++++ V KSF +VLKG+ V +GE++ IIG SGSGKST L CI+ LE IDSG I + Sbjct: 1 MIEIENVRKSFSSLEVLKGIDLTVEKGEVVTIIGGSGSGKSTLLTCINGLEPIDSGRIVI 60 Query: 86 AGIRVDDPQVDLHKLRREVGIVFQSYNLFPHLNVLENVMLALRHVKQQDKAEARRVALAA 145 G V DL++LRR+VGIVFQ +N FPHL VLENVMLA R V K +A +A+ Sbjct: 61 DGTDVHAKGTDLNRLRRKVGIVFQQWNAFPHLTVLENVMLAPRKVLGLPKDKAEEIAVKQ 120 Query: 146 LAQVGLDEKANAYPEQLSGGQQQRVAIARSLAMAPKVMLFDEVTSALDPQLTGEVLRVME 205 L VGL EK YP ++SGGQQQR+AIAR+LAM+P+ MLFDEVTSALDP L GEVL ++ Sbjct: 121 LTHVGLGEKLKVYPNRMSGGQQQRMAIARALAMSPEYMLFDEVTSALDPMLVGEVLDTLK 180 Query: 206 DLAANGMTMLLVTHEMNFAKRVADRIIYMHQGRVWEVG-PGEMLDHPHTPELQAFLAA 262 LA GMTM+ VTHEM FA+ V+DR+ + HQG + E+G P ++ P PE Q FLA+ Sbjct: 181 MLAEEGMTMICVTHEMTFARDVSDRVAFFHQGIMAEIGSPDQIFASPQNPETQKFLAS 238