BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0265.p (590 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2265 [E] COG2303 Choline dehydrogenase and related flavoprotei... 581 e-165 Cj0415 [E] COG2303 Choline dehydrogenase and related flavoprotei... 360 7e-99 RSp0904 [E] COG2303 Choline dehydrogenase and related flavoprote... 117 6e-26 VNG1035C [E] COG2303 Choline dehydrogenase and related flavoprot... 114 7e-25 AGl980 [E] COG2303 Choline dehydrogenase and related flavoprotei... 105 3e-22 AGl1138 [E] COG2303 Choline dehydrogenase and related flavoprote... 99 3e-20 CC1634 Non COG 82 4e-15 BMEI0025 [E] COG2303 Choline dehydrogenase and related flavoprot... 81 7e-15 >PA2265 [E] COG2303 Choline dehydrogenase and related flavoproteins Pae Pseudomonas aeruginosa Length = 591 Score = 581 bits (1497), Expect = e-165, Method: Compositional matrix adjust. Identities = 284/584 (48%), Positives = 388/584 (66%), Gaps = 4/584 (0%) Query: 9 VDVVIVGLGWAGSLMAIELAQAGLKVRALERGPDRPP-EDFAYPKPADQYGYATRNKVFA 67 VD V+VG GW G+++A EL +AGL V ALERG +R D AYP D+ Y TR K+F Sbjct: 8 VDAVVVGFGWTGAILAKELTEAGLNVVALERGENRDTYPDGAYPNTLDELTYNTRGKLFQ 67 Query: 68 TPRDAALTVRYNTAQQALPTRKWGAFAPGTGVGGSGLHWTAVLIRATPTDLKLKTYADQA 127 + +++R+ ALP R+ AF PG GVGG+GLHW+ V R P +L+L+++ ++ Sbjct: 68 NLSKSTVSIRHGINDTALPYRQLSAFLPGDGVGGAGLHWSGVHFRIMPEELRLRSHYEER 127 Query: 128 YKHSNLDPEMRIKDFPFTWNEIEPHYDFFDKVCGLSGTTGNLRGQIQPGGDPFEGPRSNP 187 Y + M I+D+ ++ E+EPH+DF +KV G SGT ++GQ+ G+PF RS+ Sbjct: 128 YGKKFIPEGMTIQDYGVSYEELEPHFDFAEKVFGTSGTAHTVKGQVVGKGNPFAADRSDD 187 Query: 188 YPLPALHDTYNNTLFADVARKLGYHPFPNPSANVSQAWTNPYGAQIAPCNYCGFCSKYPC 247 +PLPAL Y+ LF A +LG HP+ P+AN S WTNPYG Q+ PCN+CGFCS Y C Sbjct: 188 FPLPALRQVYSAQLFRKAAEELGLHPYDLPAANASGPWTNPYGVQMGPCNFCGFCSGYAC 247 Query: 248 LNYSKASPQTTILDVVKRLPNFDYKVNANVIRVDLHADKKTARGVTYVDENMKEVFQPAK 307 YSKASP IL +++ P F+ + N NV++V+L +D + A GVTYVD +E+ QPAK Sbjct: 248 YMYSKASPNLNILPALRQTPLFELRANCNVLKVNLDSDGRQATGVTYVDAQGREIVQPAK 307 Query: 308 IVILSSFQFANVRLMLLSGIGKPYDPITETGVIGRNYAFLSNGGATLFF-KDKHFNFFAT 366 +VI+S+FQF NVRL+LLSGIGKPYDP T GV+G+N+A+ + FF KD H N F Sbjct: 308 LVIISAFQFHNVRLLLLSGIGKPYDPRTGEGVVGKNFAYQNMATIKAFFDKDVHTNPFVG 367 Query: 367 AGATGEMFNDISPGNFDDGVKLGFIGGAKIHSSQASGAPI-GTALPPGTPSWGRGWKEGM 425 G G +D + NFD G LGF+GG+ + +QA PI G A+PPGTPSWG GWK+ + Sbjct: 368 TGGGGVAVDDFNADNFDHG-PLGFVGGSPMWVNQAGSKPIGGLAVPPGTPSWGSGWKQAV 426 Query: 426 IDWYDHSMKISITTTCMSYRGHFLDLDPNYKDPWGQPLLRMTFDWRQNELKLQRYLRDIV 485 D Y H++ + + M+YR ++LDLDP YKD +GQPLLRMTFDW+ NE+++ RY+ + + Sbjct: 427 KDAYTHTVSMDAHGSNMTYRDNYLDLDPTYKDAYGQPLLRMTFDWKDNEIRMSRYVTEHM 486 Query: 486 LKISKELNPDHMSESFLALDSHWDITKYVSTHNVGGAIMGDSPRDSALNKYLQSWDVHNV 545 KI++ +NP +S S H++ Y +TH +GGAIMG P+ S LN+YLQSWDVHNV Sbjct: 487 RKIAEAMNPKAISVSVKNFGDHFNTRVYQTTHLLGGAIMGSDPKTSVLNRYLQSWDVHNV 546 Query: 546 FVPGGNAFPQNFQANPTATIGAITLMAAHAIKTQYLKNPGPLVK 589 FV G +AFPQ NPT + A+ +A AI+ QYLKNPGPLV+ Sbjct: 547 FVMGASAFPQGTGYNPTGLVAALAYWSAKAIREQYLKNPGPLVQ 590 >Cj0415 [E] COG2303 Choline dehydrogenase and related flavoproteins Cje Campylobacter jejuni Length = 573 Score = 360 bits (923), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 203/570 (35%), Positives = 306/570 (53%), Gaps = 17/570 (2%) Query: 9 VDVVIVGLGWAGSLMAIELAQAGLKVRALERGPDRPPEDFAYPKPADQYGYATRNKVFAT 68 VDVV VG GW G ++A EL +AGL V +LERG + E+F Y D++ Y + Sbjct: 8 VDVVTVGAGWTGGIVAAELTKAGLNVLSLERGHMQSTENFNYIH--DEWRYGINYGLMQD 65 Query: 69 PRDAALTVRYNTAQQALPTRKWGAFAPGTGVGGSGLHWTAVLIRATPTDLKLKTYADQAY 128 +T R++ + ALP RK G+F G VGG+G+HW R P D +++T + Q Y Sbjct: 66 CSKDTVTFRHDPSGLALPYRKMGSFLLGNNVGGAGVHWNGWTFRFMPYDFEIQTLSKQRY 125 Query: 129 KHSNLDPEMRIKDFPFTWNEIEPHYDFFDKVCGLSGTTGNLRGQIQPGGDPFEGPRSNPY 188 + L + ++D+ T+ ++EP+YD F+K CG+SG + P + RS+PY Sbjct: 126 GNK-LGNDYTLQDWGVTYKDMEPYYDRFEKTCGVSG-------EPNPLAEKMGAFRSSPY 177 Query: 189 PLPALHDTYNNTLFADVARKLGYHPFPNPSANVSQAWTNPYGAQIAPCNYCGFCSKYPCL 248 P L +T F A+ H + P++N +TNP G +APC YC +C ++ C Sbjct: 178 PQEPLENTKMLKRFESAAKSSNLHTYRLPASNSKGGYTNPDGQDLAPCQYCAYCERFGCE 237 Query: 249 NYSKASPQTTILDVVKRLPNFDYKVNANVIRVDLHADKKTARGVTYVD-ENMKEVFQPAK 307 +KASP T++ + + +NV ++ L D K GV +VD MKE QPA Sbjct: 238 YGAKASPLNTVIPKAMSTGKYTIRTYSNVTQI-LKKDGKVT-GVKFVDTRTMKEYIQPAD 295 Query: 308 IVILSSFQFANVRLMLLSGIGKPYDPITETGVIGRNYAFLSNGGATLFFKDKHFNFFATA 367 IV+L+S+ F N +L+++S IG+ YDP T G +GRNY + N G T FF D+ FN F + Sbjct: 296 IVVLTSYMFNNAKLLMVSNIGEQYDPKTGKGTLGRNYCYQMNMGTTAFF-DEQFNTFMGS 354 Query: 368 GATGEMFNDISPGNFDDGVKLGFIGGAKIHSSQASGAPIGTA-LPPGTPSWGRGWKEGMI 426 GA G +D + NFD K F+ GA I+S Q PI +A LP G P+WG +K+ + Sbjct: 355 GALGTTSDDFNGDNFDHS-KEKFLHGAMIYSVQLGTRPIQSAPLPAGAPTWGAEFKKALN 413 Query: 427 DWYDHSMKISITTTCMSYRGHFLDLDPNYKDPWGQPLLRMTFDWRQNELKLQRYLRDIVL 486 + ++ + + ++ ++L LDP YKD +G PLLR+T+++ + L +++ D Sbjct: 414 YNFTRAITVGGQGASLPHKNNYLSLDPTYKDAFGMPLLRLTYNFTDQDRALHKFITDKTA 473 Query: 487 KISKELNPDHMSESFLALDSHWDITKYVSTHNVGGAIMGDSPRDSALNKYLQSWDVHNVF 546 +++K + + L + + Y STHN GG MG S +N YLQ WD N+F Sbjct: 474 EVAKRMQGVKSIKKGAYLKD-YSVVPYQSTHNTGGTTMGADRETSVVNTYLQHWDADNLF 532 Query: 547 VPGGNAFPQNFQANPTATIGAITLMAAHAI 576 V G F N NPT T+GA+ A I Sbjct: 533 VVGAGNFQHNSGYNPTDTVGALAYRCAEGI 562 >RSp0904 [E] COG2303 Choline dehydrogenase and related flavoproteins Rso Ralstonia solanacearum Length = 647 Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 143/574 (24%), Positives = 225/574 (39%), Gaps = 87/574 (15%) Query: 86 PTRKWGAFAPGTGVGGSGLHWTAVLIRATPTDLKLKTYADQAYKHSNLDPE-MRIKDFPF 144 P R + G+ +GG + W R P D +LKTY ++ + L E + D+P Sbjct: 86 PARAFDGGWTGSVLGGGSVLWGTWSFRPLPIDFRLKTYYERTGELGQLQKEGYNVADWPL 145 Query: 145 TWNEIEPHYDFFDKVCGLSGTTGNLRGQIQP-----------GGDPFEGPRSN-----PY 188 + E+ P++ + + G+SG + I+ GG+ + G + + Sbjct: 146 AYQEMMPYFHVAETLLGVSGDRAGMNRSIRESAWYQDLRTRFGGEAWFGTDAQWLPDAAF 205 Query: 189 PLPALHDTYNNTLFADVARKLGYHPFPNPSANV--------SQA---------------- 224 PL A T + +D G HPFP P+A V +QA Sbjct: 206 PLGAYPTTPVGRIVSDGMDHKGMHPFPTPTAIVQPGSAGFGTQAAIANALNQHRDELDGV 265 Query: 225 -WTNP----YGAQI-APCNYCGFCSKYPCLNYSKASPQ-----TTILDVVKRLPNFDYKV 273 W P + +QI CN CG+C +Y C + + SP+ TT+ ++ +R N + + Sbjct: 266 LWNRPAEQLWSSQIRQACNMCGYCGEYLC--WGRTSPKWGTADTTLRELGQR-DNAEIRC 322 Query: 274 NANVIRVDLHADKKTARGVTYVD----ENMKEVFQPAKIVILSSFQFANVRLMLLSGIGK 329 NA + V A + A GV Y+D ++ + V Q A+ VI+S RL+LLS G Sbjct: 323 NAKTLEVLYDAASRRATGVAYLDLTDPDHPRRVEQFAETVIISCGAVQTSRLLLLS--GP 380 Query: 330 PYDPITETGVIGRNYAF--LSNGGATLFFKDKHFNFFATAGATGEMFNDISPGNFD---- 383 P +G +GRN F G T+ + G TG + FD Sbjct: 381 PEGLGNSSGQLGRNAMFHLFGLGMRTVLGEAFQGRLHGELGPTG------NTSTFDTYFV 434 Query: 384 -DGVKLGFIGGAKIHSSQASGAPIGTALPPGTPSWGRGWKEGMIDWYDHSMKISITTTCM 442 DG GG +S A P+ A+ S G + + + +I +T + Sbjct: 435 RDGDGRWIKGGHL--TSAAKKNPLEDAVNAVNGSSKAGAFLDQLLVNNRTFEIRLTGDDL 492 Query: 443 SYRGHFLDLDPNYKDPWGQPLLRMTFDWRQ----------NELKLQRYLRDIVLKISKEL 492 + + LDP + D +G P+ R++ NE +L + +K EL Sbjct: 493 PCPENRVSLDPTHVDEYGVPVARISRRSISDAAGNKFVGPNEQRLDAAAQG-AMKAVFEL 551 Query: 493 NPDHMSESFLALDSHWDITKYVSTHNVGGAIMGDSPRDSALNKYLQSWDVHNVFVPGGNA 552 A I V H +G MG+ P S +N+Y + DV NVFV + Sbjct: 552 YAARRGALAAAPKPTQAILSLVGDHQMGTCRMGEDPATSVVNRYGRLHDVENVFVVDSSF 611 Query: 553 FPQNFQANPTATIGAITLMAAHAIKTQYLKNPGP 586 P NP T+ A L I T+ + P Sbjct: 612 MPTGLGLNPMVTVVANALRVGTHIVTRLQQGSMP 645 >VNG1035C [E] COG2303 Choline dehydrogenase and related flavoproteins Hbs Halobacterium sp. NRC-1 Length = 529 Score = 114 bits (285), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 148/599 (24%), Positives = 236/599 (39%), Gaps = 105/599 (17%) Query: 8 DVDVVIVGLGWAGSLMAIELAQAGLKVRALERGP-----DRPPEDFAYPKPADQYGYATR 62 + DV ++G G AG L+A LA G V LE GP DR +PA +G A+ Sbjct: 8 NADVCVIGAGPAGGLIADRLASDGHSVVVLEAGPRFDAADRERRMERSIRPA--HGPASV 65 Query: 63 NKVFATPRDAALTVRYNTAQQALPTRKWGAFAPGTGVGGSGLHWTAVLIRATPTDLKLKT 122 ++ PRDA + T + P A GVGGS LHW +++R D +L + Sbjct: 66 WEM-GGPRDAYAS----TGDRYYPLNA----ARVKGVGGSTLHWQGMVMRLHEQDFRLAS 116 Query: 123 YADQAYKHSNLDPEMRIKDFPFTWNEIEPHYDFFDKVCGLSGTTGNLRGQIQPGGDPFEG 182 D+PF ++ ++P+Y + G+SG + N PF Sbjct: 117 ATGVG------------ADWPFDYDTLKPYYAAAESALGVSGASDN----------PFAP 154 Query: 183 PRSNPYPLPALHDTYNNTLFADVARKLGYHPFPNPSANVSQAWTNPYGAQIAPCNYCGFC 242 PR P+P PA +Y+++LFAD LG P+A +S G Sbjct: 155 PREQPHPQPAFPPSYSDSLFADACESLGIATHSVPNARLS----------------AGRE 198 Query: 243 SKYPCLNYSKASP--------QTTILDVVKRLPNFDYKV--NANVIRVDLHADKKTARGV 292 ++ C+ Y P T+ V R + +V A V R++ A G Sbjct: 199 TRRACVGYGTCQPVCPSGAKYDATVH--VDRATDAGARVIDEAPVQRLEHDAAGDRVTGA 256 Query: 293 TYVDENMKEVFQPAKIVILSSFQFANVRLMLLSGIGKPYDPIT-ETGVIGRNYA--FLSN 349 Y + Q A +L++ RL+LLS + D + +G++GR + + Sbjct: 257 VYATPDGTTHRQSATEFVLAAGGIETPRLLLLSDSDRYPDGLANSSGLVGRYFMDHLFAG 316 Query: 350 GGATLF--FKDKHFNFFATAGATGEMFNDISPGNFDDGVKLGFIGGAKIHSSQASGAPIG 407 G TL + H F T + D P +KL F+ + A +P Sbjct: 317 AGGTLDEPTRQNHVGFNTT---ESHQYYD-RPDGSRGAIKLEFL-------NYAGPSPAE 365 Query: 408 TALPPGTPSWGRGWKEGMIDWYDHSMKISITTTCMSYRG----HFLDLDPNYKDPWGQPL 463 AL G W + M D + I + + + + L P D G P+ Sbjct: 366 MALS------GDDWGDAMCDRIRDASGTHIAVGGLVEQQPRPENRVRLHPERTDVHGNPV 419 Query: 464 LRMTFDWRQNELKLQRYLRDIVLKISKELNPDHMSESFLALDSHWDITKYVST---HNVG 520 + + L Y R + + + E+ + ++E L D W + + H++G Sbjct: 420 PDVVW-------SLSAYERRTIER-ANEIQREILTE--LGADIEWTVGPEDTGPAFHHMG 469 Query: 521 GAIMGDSPRDSALNKYLQSWDVHNVFVPGGNAFPQNFQANPTATIGAITLMAAHAIKTQ 579 MG P +S ++ L++ D+ N+ V + FP NPT TI A+ L AA I + Sbjct: 470 TTRMGTDPAESVVDPRLRTHDLSNLSVASSSVFPTAGAMNPTLTIAALALKAADHIAAR 528 >AGl980 [E] COG2303 Choline dehydrogenase and related flavoproteins Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 561 Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 147/621 (23%), Positives = 231/621 (37%), Gaps = 121/621 (19%) Query: 4 ITNDDVDVVIVGLGWAGSLMAIELAQAGLKVRALERGPDRPPEDFAYPKPADQ--YGYAT 61 + ++ D ++VG G +G A EL Q GLKV LERG R E + AD+ + Y Sbjct: 1 MADNHYDAIVVGSGISGGWAAKELTQKGLKVLMLERG--RNIEHVTDYQNADKEAWDYPH 58 Query: 62 RNKVFATPR-------------DAALTVRYNTAQQALPTRKWGAFAPGTGVGGSGLHWTA 108 RN+ + +A L + + + K + G VGG L W Sbjct: 59 RNRATQEMKAKYPVLSRDYLLEEATLGMWADEQETPYVEEKRFDWFRGYHVGGRSLLWGR 118 Query: 109 VLIRATPTDLKLKTYADQAYKHSNLDPEMRIKDFPFTWNEIEPHYDFFDKVCGLSGTTGN 168 R + TD + A D+P + ++ P YD+ ++ G+SG+ Sbjct: 119 QTYRWSQTDFEANAKDGIAV------------DWPIRYEDVSPWYDYVERFAGISGSREG 166 Query: 169 LRGQIQPGGDPFEGPRSNPYPLPALHDTYNNTLFADVARKLG------YHPFPNPSANVS 222 L I P G+ P PL N + DVA +L H + AN++ Sbjct: 167 L--DILPDGEFLP-----PIPL--------NFVEQDVASRLKKAFKGTRHLINSRCANIT 211 Query: 223 QAWTNPYGAQIAPCNYCGFCSKYPCLNYSKASPQTTILDVVKRLPNFDYKVNANVIRVDL 282 Q + + PC + C + C S Q + L N + + V + Sbjct: 212 QELPD---QERTPCQFRNKC-RLGCPFGGYFSTQASTLPAAVATGNLTLRPFSIVKEILY 267 Query: 283 HADKKTARGVTYVDENMKEVFQPAKIVILSSFQFANVRLMLLSGIGKPYDPI--TETGVI 340 DKK ARGV +D ++ +I + N +L++ ++ + +G + Sbjct: 268 DKDKKKARGVEIIDAETNLTYEYTADIIFLNASTLNSTWVLMNSATDVWEGGLGSSSGEL 327 Query: 341 GRNYAFLSNGGATLFFKDKHFNFFATAGATGEM-------FNDISPGNF---------DD 384 G N D HF GATG++ F P F DD Sbjct: 328 GHN------------VMDHHFRM----GATGQVDGFEDFYFKGRRPAGFYIPRFRNTGDD 371 Query: 385 GVK----LGFIGGAKIHSSQASGAPIG-------TALPPGTPSWGRGWKEGMIDWYDHSM 433 K G+ G A + A + T PG GW GM + + Sbjct: 372 KRKYLRGFGYQGSASRSRWEREIAELNIGADYKDTLTEPG------GWTIGMTAFGE--- 422 Query: 434 KISITTTCMSYRGHFLDLDPNYKDPWGQPLLRMTFDWRQNELKLQRYLRDIVLKISKELN 493 + Y + + LD + KD WG P+L M + +QNEL ++ + + +++ + + Sbjct: 423 -------MLPYHDNRVKLDHDKKDKWGLPVLSMNVEMKQNELDMREDMVNDAVEMFEAVG 475 Query: 494 PDHMSESFLALDSHWDITKYVSTHNVGGAIMGDSPRDSALNKYLQSWDVHNVFVPGGNAF 553 ++ S + H +G A MG P+ S LN Q WD NVFV G Sbjct: 476 IKNVKPS------RGTYAPGMGIHEMGTARMGRDPKTSVLNGNNQVWDAPNVFVTDGACM 529 Query: 554 PQNFQANPTATIGAITLMAAH 574 NP+ T A+T AA Sbjct: 530 TSASCVNPSLTYMALTARAAE 550 >AGl1138 [E] COG2303 Choline dehydrogenase and related flavoproteins Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 527 Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 142/579 (24%), Positives = 215/579 (37%), Gaps = 97/579 (16%) Query: 10 DVVIVGLGWAGSLMAIELAQAGLKVRALERGPDRPPEDFAYPKPADQYGYATRNKVFATP 69 D+VI+G G GS +A++LA G K+ +ERG P E P+ AD +N+ T Sbjct: 14 DIVIIGSGVGGSAVALKLAATGAKILIIERGEKLPNE----PENADAEAVFVQNRYRTTD 69 Query: 70 RDAALTVRYNTAQQALPTRKWGAFAPGTGVGGSGLHWTAVLIRATPTDLKLKTYADQAYK 129 R T + P + + VGG + + R D + + D Sbjct: 70 -----LYRDETGRTYRPGQYY-------YVGGHTKFYGTAMFRFRDRDFREVEHED---- 113 Query: 130 HSNLDPEMRIKDFPFTWNEIEPHYDFFDKVCGLSGTTGNLRGQIQPGGDPFEGPRSNPY- 188 + P +P ++ E+EP Y +++ G+ G G+ DP E PRS PY Sbjct: 114 --GVSPA-----WPVSYAELEPFYAEAERLFGVRGRAGD---------DPTEPPRSAPYM 157 Query: 189 --PLPALHDTYNNTLFADVAR---KLGYHPFPNPSANVSQAWTNPYGAQIAPCNYCGFCS 243 P+P + + VA+ +LG PF PSA P G C CG C Sbjct: 158 HAPIP------HEPVIGRVAKGFERLGLRPFHMPSA----IDYGPGGL----CRRCGTCD 203 Query: 244 KYPCLNYSKASPQTTILDVVKRLPNFDYKVNANVIRVDLHADKKTARGVTYVDENMKEVF 303 + C +K +T +L R PN A V R+ D K V E E+ Sbjct: 204 AFVCRFDAKGDAETRLLRPALRHPNVSLLTGARVRRLIADGDGKHIVAVEI--ERAGEIT 261 Query: 304 Q-PAKIVILSSFQFANVRLMLLSG-IGKPYDPITETGVIGRNYAFLSNGGATLFFKDKHF 361 A + +LS+ + ++L S KP +GV+GR +L N + F Sbjct: 262 TIEAPLFVLSAGAINSALILLRSADEKKPNGLANSSGVVGR---YLMNHHLSGLMGLLPF 318 Query: 362 NFFATAGATGEMFNDISPGNFDDGVKLGFIGGAKIHSSQASGAPIGTALPPGTPSWGRGW 421 T ND G D G + Q G G + P R Sbjct: 319 TINDTRFPKTMSLNDFFDGTPGDEAARGNV--------QMLGNIQGPMIRAAYPWMPRPL 370 Query: 422 KEGMIDWYDHSMKISITTTCMSYRGHFLDLDPNYKD---PWGQPLLRMTFDWRQNELKLQ 478 + + S+ MS + P Y PWG+ + + E Q Sbjct: 371 ANLL-------ARHSVDFLVMS------EDTPKYDSRVKPWGKNGAELIYRPGDREAH-Q 416 Query: 479 RYLRDIVLKISKELNPDHMSESFLALDSHWDITKYVSTHNVGGAIMGDSPRDSALNKYLQ 538 R++R + + K P + SF +H G MGD P+++ALN Q Sbjct: 417 RFVRHMRSLLRKNGFPVVLGHSF---------GIEAPSHQCGTVRMGDDPKEAALNALCQ 467 Query: 539 SWDVHNVFVPGGNAFPQNFQANPTATIGAITLMAAHAIK 577 ++D N++V FP + NP T+ A L I+ Sbjct: 468 TYDHPNLYVVDAGFFPSSAALNPALTVAAQALRVGDHIR 506 >CC1634 Non COG Length = 579 Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 143/618 (23%), Positives = 226/618 (36%), Gaps = 106/618 (17%) Query: 10 DVVIVGLGWAGSLMAIELAQAGLKVRALERGPD-RPPEDF--------AYPKPADQYGYA 60 D ++VG G G + A EL + GLKV LERGP R ED+ P + A Sbjct: 15 DAIVVGSGITGGIAAKELTEKGLKVLVLERGPMVRHLEDYPTAMLDPWQSKYPQGKLPEA 74 Query: 61 TRNKVFATPRDAALTVRYNTAQ-----QALPTRKWGAF--APGTGVGGSGLHWTAVLIRA 113 N + R T+ T P + F G VGG L W Sbjct: 75 ELNAHYKVQRRTGYTMTEQTQHFFVRDDEHPYTEENRFDWIRGYHVGGRSLTW------- 127 Query: 114 TPTDLKLKTYADQAYKHSNLDPEMRIK-----DFPFTWNEIEPHYDFFDKVCGLSGTTGN 168 Q+Y+HS +D E + D+P + ++ P Y+ ++ G+SG Sbjct: 128 ----------GRQSYRHSPIDFEANAREGIAVDWPIRYEDLAPWYEHVERFIGVSGQAEG 177 Query: 169 L----RGQIQPGGDPFEGPRSNPYPLPALHDTYNNTLFADVARKLGYHPFPNPSANVSQA 224 L G QP P L + + AR P + + Sbjct: 178 LPHFPDGHYQP-----------PMELNCVEKAFK-------ARSEARFPERRVTIGRTAH 219 Query: 225 WTNPYGAQIA----PCNYCGFCSKYPCLNYSKASPQTTILDVVKRLPNFDYKVNANVIRV 280 T+P Q+A C Y C + C + S + L +R N + N+ V + Sbjct: 220 LTDPTEEQLALGRTKCQYRNLCIR-GCPFGAYYSSNSGGLIAAERTGNLVIRPNSIVTEL 278 Query: 281 DLHADKKTARGVTYVD-ENMKEVFQPAKIVILSSFQFANVRLMLLSGIGK-PYDPITETG 338 A GV +D E K+ A ++ L + + +M+ S + P + Sbjct: 279 IYDERAGRASGVRILDAETRKDEEFHADVIFLCASALNSAWIMMNSTSSRFPNGFGNASD 338 Query: 339 VIGRNYA--FLSNG--GATLFFKDKHFNFFATAGATGEMFN---DISPGNFDDGVKLGFI 391 +GRN L G G F D +F+ G F D + D G+ Sbjct: 339 QLGRNVMDHHLGAGATGQAPEFADMYFSGRRPNGIYVPRFRNLGDAASKRSDYLRGFGYQ 398 Query: 392 GGA--------KIHSSQASGAPIGTALPPGTPSWGRGWKEGMIDWYDHSMKISITTTCMS 443 GGA + + GA AL P W +M +S + Sbjct: 399 GGAGRATWERDRGQGGRGFGAARKAALSQPGP------------W---TMGLSGFGEMLP 443 Query: 444 YRGHFLDLDPNYKDPWGQPLLRMTFDWRQNELKLQRYLRDIVLKISKELNPDHMSESFLA 503 Y + + L+ + +D +G P L M R NE+ ++R ++ ++ + + F Sbjct: 444 YADNRVTLNRDVEDKFGLPTLTMNVTMRDNEMAMRRDMQAAAAEMLE-------AAGFQN 496 Query: 504 LDSHWD-ITKYVSTHNVGGAIMGDSPRDSALNKYLQSWDVHNVFVPGGNAFPQNFQANPT 562 + +H + + H +G A MG P+ S LN + Q + NV+V G A NP+ Sbjct: 497 VRAHDNGFAPGLGIHEMGTARMGRDPKTSVLNAHNQVHECKNVYVTDGAAMASASCVNPS 556 Query: 563 ATIGAITLMAA-HAIKTQ 579 T A+T AA HA++ + Sbjct: 557 LTYMALTARAADHAVRAR 574 >BMEI0025 [E] COG2303 Choline dehydrogenase and related flavoproteins Bme Brucella melitensis Length = 494 Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 139/570 (24%), Positives = 215/570 (37%), Gaps = 110/570 (19%) Query: 23 MAIELAQAGLKVRALERG---PDRPPEDFAYPKPADQYGYATRNKVFATPRDAALTVRYN 79 MA LA +G + LE G DRP + P+ Q G F P++ + Y Sbjct: 19 MAAGLAASGADILILEAGARLADRP--ENRDPRAIFQRG-------FFRPKE----LWYE 65 Query: 80 TAQQALPTRKWGAFAPGT--GVGGSGLHWTAVLIRATPTDLKLKTYADQAYKHSNLDPEM 137 T+ F PG VGG+ + AVLIR D + + + + P Sbjct: 66 TSG--------APFNPGNYYNVGGNSKFYGAVLIRYRREDFEELAHLE------GVSPA- 110 Query: 138 RIKDFPFTWNEIEPHYDFFDKVCGLSGTTGNLRGQIQPGGDPFEGPRSNPYPLPALHDTY 197 +PF+++E+EP Y +++ + G G+ DP E S PYP A+ D Sbjct: 111 ----WPFSYDELEPWYCKAEELFQVRGELGD---------DPTEPHHSKPYPYAAIRDER 157 Query: 198 NNTLFADVARKLGYHPFPNPSANVSQAW----TNPYGAQIAPCNYCGFCSKYPCLNYSKA 253 +K G HP P + W P+ A +P + K Sbjct: 158 PIADMRARLKKAGLHPASLPLGVDIERWLAKARTPWDA-------------HPNCDDGKM 204 Query: 254 SPQTTILDVVKRLPNFDYKVNANVIRVDLHADKKTARGVTYVDENMKEVFQPAKIVILSS 313 +T L + N + +A V R++ D K V YV V +P K+VILS+ Sbjct: 205 DAETCPLAQALQYANVRLETSAQVRRLEAGPDGKAITAVHYVKNGEALVLRP-KLVILSA 263 Query: 314 FQFANVRLMLLSGIGKPYDPITETGVIGRNYAFLSNGGATLFFKDKHFNFFATAGATGEM 373 + L+L SG+ D +GRN+ N A + F ++ N G Sbjct: 264 GAVQSAALLLRSGLANRSDQ------VGRNF-MNHNASAVIAFDPRYRNDSVYQKTFG-- 314 Query: 374 FNDISPGNFDDGVKLGFIGGAKIHSSQASGAPIGTALPPG---TPSWGRGWKEG-MIDWY 429 FND DG GG + + Q G G L P W G ID+Y Sbjct: 315 FNDYY---LSDGA-----GGPPLGNVQLLGRVSGAILKSNMRHVPEWLLNRIAGHTIDFY 366 Query: 430 DHSMKISITTTCMSYRGHFLDLDPNYKDPWGQPLLRMTFDWRQNELKLQRYLRDIVLKIS 489 S + + +S G + L + W + L+ + KL+ LR + Sbjct: 367 AMSEDLPSPESRVSVDGDRIILH-WVRSNWKEHLMLVE--------KLKSALRAVGF--- 414 Query: 490 KELNPDHMSESFLALDSHWDITKYVSTHNVGGAIMGDSPRDSALNKYLQSWDVHNVFVPG 549 P +S +F + +H G A +G+ P + L+ Y +++D N++V Sbjct: 415 ----PVVLSRAF---------DRRTPSHQCGTARIGNDPATAPLDPYCRAYDHPNLYVVD 461 Query: 550 GNAFPQNFQANPTATIGAITLMAAHAIKTQ 579 + P + NP TI A L A IK + Sbjct: 462 ASFLPTSAAVNPALTIAAQALRVADRIKRE 491