BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0221.p (211 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA4182 [K] COG2808 Transcriptional regulator Pae Pseudomonas aer... 283 2e-76 RSp0689 [K] COG2808 Transcriptional regulator Rso Ralstonia sola... 263 2e-70 mll0013 [K] COG2808 Transcriptional regulator Mlo Mesorhizobium ... 163 3e-40 mlr6176 [K] COG2808 Transcriptional regulator Mlo Mesorhizobium ... 150 1e-36 BH0412 [K] COG2808 Transcriptional regulator Bha Bacillus halodu... 120 3e-27 XF2038 [K] COG2808 Transcriptional regulator Xfa Xylella fastidi... 119 6e-27 DR1683 [K] COG2808 Transcriptional regulator Dra Deinococcus rad... 110 3e-24 CC2566 Non COG 82 1e-15 YKL070w [K] COG2808 Transcriptional regulator Sce Saccharomyces ... 77 4e-14 BS_paiB [K] COG2808 Transcriptional regulator Bsu Bacillus subtilis 75 1e-13 >PA4182 [K] COG2808 Transcriptional regulator Pae Pseudomonas aeruginosa Length = 212 Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 138/210 (65%), Positives = 161/210 (76%), Gaps = 1/210 (0%) Query: 1 MYIPAHFADNDTASLHQLITAHPFGVLVSHTASGLDANHLPCHLDTAQGPLGTLHLHVAR 60 MY+P+HF ++D +LH LI +P G+LVSH +GLDANHLP L A+G GTL HVAR Sbjct: 1 MYLPSHFEESDPQALHALIRDYPLGLLVSHGEAGLDANHLPFELSPAKGAQGTLEAHVAR 60 Query: 61 A-ALWRELADGDPVLVVFSAGDAYVSPSWYPSKHEAHRQVPTWNYSVAHAHGRVTIRDDE 119 +W EL DGD VLVVF AGDAY+SP WYPSK E HRQVPTWNY V HAHGRV IRDDE Sbjct: 61 NNPVWSELRDGDEVLVVFRAGDAYISPQWYPSKQEHHRQVPTWNYRVVHAHGRVRIRDDE 120 Query: 120 RYLRGVVARLTRTHEAGEQKPWKMSDAPADFTDTLLKAIVGIEIEITRLEGKRKLSQNKE 179 RY+RG+VARLTRTHEA ++ PWKM+D PAD+ D +L+ IVGIEIEITRL GK KLSQNKE Sbjct: 121 RYVRGLVARLTRTHEATQETPWKMTDGPADYIDEMLRLIVGIEIEITRLVGKFKLSQNKE 180 Query: 180 VRDIEGAGHTLVARGHEALGQAMLAEAQRK 209 RDI GA L+ARG +A+G AM A R+ Sbjct: 181 ARDIRGASAALLARGEQAIGAAMDDCAARR 210 >RSp0689 [K] COG2808 Transcriptional regulator Rso Ralstonia solanacearum Length = 212 Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 128/211 (60%), Positives = 154/211 (72%), Gaps = 1/211 (0%) Query: 1 MYIPAHFADNDTASLHQLITAHPFGVLVSHTASGLDANHLPCHLDTAQGPLGTLHLHVAR 60 MY+P F + T LH L+ +PFG LV+H SGLDANH+P L+ +G LG LH HVAR Sbjct: 1 MYVPTDFDEPHTEVLHALMAQYPFGTLVTHGKSGLDANHIPFLLNADEGRLGVLHAHVAR 60 Query: 61 A-ALWRELADGDPVLVVFSAGDAYVSPSWYPSKHEAHRQVPTWNYSVAHAHGRVTIRDDE 119 A +W+++ADGD VLV+F AGDAY+SP+WYPSK E HR VPTWNY V HAHGR+ IRDDE Sbjct: 61 ANPVWQDVADGDEVLVIFHAGDAYISPNWYPSKPEHHRHVPTWNYRVVHAHGRIAIRDDE 120 Query: 120 RYLRGVVARLTRTHEAGEQKPWKMSDAPADFTDTLLKAIVGIEIEITRLEGKRKLSQNKE 179 R++RGV+ RLTR HEA + PWKM+DAPAD+ LLK IVGIEIEITRL GK KL QN+E Sbjct: 121 RFVRGVLGRLTRAHEASQPVPWKMADAPADYVSALLKEIVGIEIEITRLVGKAKLGQNRE 180 Query: 180 VRDIEGAGHTLVARGHEALGQAMLAEAQRKQ 210 RD GA L A G + +G AMLA K+ Sbjct: 181 ARDARGAATALKASGKDIIGDAMLACLAEKR 211 >mll0013 [K] COG2808 Transcriptional regulator Mlo Mesorhizobium loti Length = 216 Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 86/209 (41%), Positives = 118/209 (56%), Gaps = 3/209 (1%) Query: 1 MYIPAHFADNDTASLHQLITAHPFGVLVSHTASGLDANHLPCHLDTAQGPLGTLHLHVAR 60 MY P HF + LH LI AHP G+L+S+ G AN +P LD G L H+A+ Sbjct: 1 MYEPPHFQETRPDVLHGLIRAHPLGMLISNGPDGPVANAIPFLLDAEGLSNGRLRAHLAK 60 Query: 61 AAL-WRELADG--DPVLVVFSAGDAYVSPSWYPSKHEAHRQVPTWNYSVAHAHGRVTIRD 117 A WR +AD PVL+VF DAYV+PSWY +K E + VPTWNY++ G + D Sbjct: 61 ANPHWRLIADNPASPVLIVFQGADAYVTPSWYETKRETGKVVPTWNYAIVQVRGTAKVID 120 Query: 118 DERYLRGVVARLTRTHEAGEQKPWKMSDAPADFTDTLLKAIVGIEIEITRLEGKRKLSQN 177 D+ +L +A LT + E Q PW ++DAP F + +K I+G+EIEI+ + GK K+SQN Sbjct: 121 DQEWLAQQIADLTGSQEGARQAPWAVTDAPPPFIQSQIKGIIGLEIEISEIHGKWKVSQN 180 Query: 178 KEVRDIEGAGHTLVARGHEALGQAMLAEA 206 + V D G L + +A A L + Sbjct: 181 RPVADRAGVAQGLESEVADASDMARLVRS 209 >mlr6176 [K] COG2808 Transcriptional regulator Mlo Mesorhizobium loti Length = 207 Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 85/195 (43%), Positives = 106/195 (54%), Gaps = 6/195 (3%) Query: 1 MYIPAHFADNDTASLHQLITAHPFGVLVSHTASGLDANHLPCHLDTAQGPLGTLHLHVAR 60 MYIP F D+D L I A V+ TA G A LP LD ++G G ++ H+A+ Sbjct: 1 MYIPPAFRDDDKECLRATIRAALLANFVTVTAEGPLATPLPLFLDESEGEHGVIYGHLAK 60 Query: 61 A---ALWRELADGDPVLVVFSAGDAYVSPSWYPSKHEAHRQVPTWNYSVAHAHGRVTIRD 117 A L DG L +F DAYV+P+WY +K E + VPTWNY HA+G V + Sbjct: 61 ANPQCRVPPLGDG---LAIFMGPDAYVTPAWYATKRETGKVVPTWNYVAVHAYGPVEFFE 117 Query: 118 DERYLRGVVARLTRTHEAGEQKPWKMSDAPADFTDTLLKAIVGIEIEITRLEGKRKLSQN 177 D L VV RLT HE PW +SDAP DF L+ IVG+ + ITRLEGKRK+SQN Sbjct: 118 DAGRLLDVVNRLTDHHEGERASPWAVSDAPPDFIQAQLRGIVGLRMPITRLEGKRKMSQN 177 Query: 178 KEVRDIEGAGHTLVA 192 + D G L A Sbjct: 178 RNAADRAGVAAGLAA 192 >BH0412 [K] COG2808 Transcriptional regulator Bha Bacillus halodurans Length = 209 Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 71/179 (39%), Positives = 93/179 (51%), Gaps = 9/179 (5%) Query: 1 MYIPAHFADNDTASLHQLITAHPFGVLVSHTASGLDANHLPCHLDTAQGPLGTLHLHVAR 60 MYIP F +D L I H FG++VS T A HLP LD +G G L H+AR Sbjct: 1 MYIPKAFHVDDVNELITFIRNHSFGIMVSQTEEEPFATHLPFLLDEQKGENGVLISHLAR 60 Query: 61 AAL-WRELADGDPVLVVFSAGDAYVSPSWYPSKHEAHRQVPTWNYSVAHAHGRVTIRDDE 119 A W+ L D VLVVF AY+SP+WY + R VPTWNY H +G D+ Sbjct: 61 ANPHWQGLQDQK-VLVVFQGPHAYISPTWY----DEPRTVPTWNYVAVHVYGTFRQIQDK 115 Query: 120 RYLRGVVARLTRTHEAGEQKPWK-MSDAPADFTDTLLKAIVGIEIEITRLEGKRKLSQN 177 ++ + + +E PW+ + D P F + LL IV EIE+ R+EG KL+QN Sbjct: 116 HKVKEWIEKTVNVYEQTMNPPWEAVFDEP--FMEGLLNGIVAFEIEVERMEGNWKLNQN 172 >XF2038 [K] COG2808 Transcriptional regulator Xfa Xylella fastidiosa 9a5c Length = 216 Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 75/192 (39%), Positives = 98/192 (51%), Gaps = 5/192 (2%) Query: 2 YIPAHFADNDTASLHQLITAHPFGVLVSHTASGLDANHLPCHLDTAQGPLGTLHLHVARA 61 Y P+ F +N SL LI PF LV A H+P L+ + P G + L + Sbjct: 3 YPPSVFVENHPTSLQALIHEQPFATLVIAVGMLPVACHVPLLLNEVE-PGGEIWLEGHIS 61 Query: 62 ALWRELADGD---PVLVVFSAGDAYVSPSWYPSKHEAHRQVPTWNYSVAHAHGRVTIRDD 118 A+ +A GD PVL +F Y+SPSWYPSK VPTWNY HAHG + D Sbjct: 62 AV-NPIATGDECCPVLAIFHGPQHYISPSWYPSKATHPAVVPTWNYVAVHAHGELMRTRD 120 Query: 119 ERYLRGVVARLTRTHEAGEQKPWKMSDAPADFTDTLLKAIVGIEIEITRLEGKRKLSQNK 178 +LR +A L+ E Q+PW++ D P D + A+VG+ + IT+L G KLSQNK Sbjct: 121 PHWLRTHLAALSDIMERDRQEPWRLDDLPTDALRQAVDALVGLRLRITQLYGIHKLSQNK 180 Query: 179 EVRDIEGAGHTL 190 D G H L Sbjct: 181 PPTDRLGVRHGL 192 >DR1683 [K] COG2808 Transcriptional regulator Dra Deinococcus radiodurans Length = 221 Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 81/213 (38%), Positives = 104/213 (48%), Gaps = 21/213 (9%) Query: 1 MYIPAHFADNDTASLHQLITAHPFGVLVSHTASGLDANHLPCHLDTAQGPLGTLHL--HV 58 MY+PAHF D L + H F LV+ A HLP Q GTL+L H+ Sbjct: 23 MYLPAHFRAEDHDQLLAFMHEHAFATLVTAPGGVPFATHLPV---LVQQEGGTLYLRSHL 79 Query: 59 ARA-ALWRELADGDPVLVVFSAGDAYVSPSWYPSKHEAHRQVPTWNYSVAHAHGRVTIRD 117 ARA W+ D VLV+F A + P+WY S VPTWNYSV HA+G+ + + Sbjct: 80 ARANKQWQHFGPQD-VLVIFQGPHALIDPAWYASAP----NVPTWNYSVVHAYGQARVVE 134 Query: 118 DERYLRGVVARLTRTHEAGEQKPWKMSDAPADFTDTLLKAIVGIEIEITRLEGKRKLSQN 177 E+ R + + L G M+ PADF +L +V EI +TRLEGK KLSQN Sbjct: 135 GEQ-TRAIASGLVERFTPG------MAAIPADFERRMLAGVVTFEIAVTRLEGKDKLSQN 187 Query: 178 KEVRDIEGAGHTLV--ARGHE-ALGQAMLAEAQ 207 K +D L+ R E A G+ M A Q Sbjct: 188 KSSQDRHNVAQALLDSERAEERATGERMAAREQ 220 >CC2566 Non COG Length = 203 Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 68/191 (35%), Positives = 88/191 (46%), Gaps = 17/191 (8%) Query: 7 FADNDTASLHQLITAHPFGVLVSHTASGLDANHLPCHLDTAQGPLGTLHLHVARA-ALWR 65 F D A L + AHPF + + P + G + L H++R L Sbjct: 7 FRVEDRAVLLDFLRAHPFVTIAASVGGRPFVAQSPIMIRELSGEI-ALDFHLSRGNVLTP 65 Query: 66 ELADGDPVLVVFSAGDAYVSPSWYPSKHEAHRQVPTWNYSVAHAHGRVT-IRDDERYLRG 124 L G P + + + DAYVSP WY E+ QVPTWNY A G V + DDE L Sbjct: 66 YLTQGFPAIALATGPDAYVSPDWY----ESPDQVPTWNYLSVEAEGAVAPLNDDE--LIA 119 Query: 125 VVARLTRTHEAG--EQKPW---KMSDAPADFTDTLLKAIVGIEIEITRLEGKRKLSQNKE 179 ++ L+ EA +KPW KM P F D LL+ I G + + RL+G KLSQNK Sbjct: 120 LLDDLSAQEEARLLPKKPWTRHKMK--PGKF-DGLLRGIQGGRLFVERLQGTFKLSQNKA 176 Query: 180 VRDIEGAGHTL 190 D GA L Sbjct: 177 DSDRLGAAKGL 187 >YKL070w [K] COG2808 Transcriptional regulator Sce Saccharomyces cerevisiae Length = 169 Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 25/161 (15%) Query: 1 MYIPAHFADNDTASLHQLITAHPFGVLVSHTAS------------------GLDANHLPC 42 MYIP HF + S ++L P G L S AS G+ A+H+P Sbjct: 1 MYIPKHFESMEL-SRYKLSKKPPLGTLFSSKASRQGFFGWRTSSNKDDPDFGMCASHIPF 59 Query: 43 HLDTAQGPLGTLHLHVARAALWRELADG-DPVLVVFSAGDAYVSPSWYPSKHEAHRQVPT 101 L H+AR E+ + LVVF + D+Y+SP+W+P K + H+ VPT Sbjct: 60 VFVEFDNGEHKLIAHLARKNKHVEMLERVQKCLVVFQSVDSYISPAWFPMKKKTHKFVPT 119 Query: 102 WNYSVAHAHG--RVTIRDDERYLRGVVARLTRTHEAGEQKP 140 W+++ H +G R+ IRDD+ +L +++ LT E E++P Sbjct: 120 WDFAAVHVYGTPRI-IRDDKDWLINMLSTLTDQEE--EKRP 157 >BS_paiB [K] COG2808 Transcriptional regulator Bsu Bacillus subtilis Length = 207 Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 10/184 (5%) Query: 1 MYIPAHFADNDTASLHQLITAHPFGVLVSHTASGLDANHLPCHLDTAQGPLGTLHLHVAR 60 MYIP +F + + + + FG +V+ A HLP + Sbjct: 1 MYIPKYFKVTNAEEIWNFVQENSFGTVVTTEQGKPIATHLPLGFNKKDDHYYITGHFAYG 60 Query: 61 AALWRELADGDPVLVVFSAGDAYVSPSWYPSKHEAHRQVPTWNYSVAHAHGRVTIRDDER 120 WR + VLV+F AY+S SWY + VPTWNY H +G+ ++ + + Sbjct: 61 NPQWRTFEACEDVLVMFQGPHAYISSSWY-----SRENVPTWNYQAVHMYGKASMLEKDE 115 Query: 121 YLRGVVARL-TRTHEAGEQKPW-KMSDAPADFTDTLLKAIVGIEIEITRLEGKRKLSQNK 178 + L +T W K+S ++ LK IVG +I++ ++ KLSQN+ Sbjct: 116 LAEELTIMLEQKTPTQAFSVLWDKLS---PKLLESELKGIVGFKIKVEDIQAAYKLSQNR 172 Query: 179 EVRD 182 D Sbjct: 173 NETD 176