BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0022.0203.p         (411 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DR1743 [GEPR] COG0477 Permeases of the major facilitator superfa...    61   5e-09

>DR1743 [GEPR] COG0477 Permeases of the major facilitator superfamily Dra
           Deinococcus radiodurans
          Length = 409

 Score = 60.8 bits (146), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 18/263 (6%)

Query: 27  AACSAHAVHDGLTDVVYVLLPLWQSQFALSYAMVGMLRGAYSGVMAGCQLLAGRLARRWG 86
           A  + H ++D    ++  L P  QS++ ++ A V +L   +S   +  Q L G +  R  
Sbjct: 39  AVTAGHFINDAYGAMLTPLTPALQSKYGVTIAAVTLLSSVFSLTSSVLQPLLGIVGERID 98

Query: 87  RKALLVGGTALAGSAYLLASQAGHVGWLLLALVLGGLGASTQHPLASSLVAESYEDSGKV 146
           R+     G  + G    L       G L+L + + G G+   HP  S+ VA   ++S   
Sbjct: 99  RRYAAALGPLMTGVGLTLMGFVPWFGALILLVAVAGFGSGFFHPAGSAYVA---QNSPAD 155

Query: 147 KQAL--SNYNFAGDIGKTLIPGLLGLLLVVASWEVGTALVGLLGLAAALLLWRLIPADTG 204
           K+ L  S ++  G  G  L P   G+ L    W        L+G   A + + + P+   
Sbjct: 156 KRGLWASIFSAGGTAGMALGPVFAGVGLTHLPW------FALIGAVIAAVTFVVTPSGAQ 209

Query: 205 QAAAGKKSG-PQRSGSGKG--LWALLGTGTIDSAVRMGFLTFLPFLLQGKGAGTAATGVA 261
           +A   K+ G  + +G  +G  +W L G   + S   MG+   LPF+L  +G G    G  
Sbjct: 210 KA---KRVGLAEYAGIFRGPLVW-LWGMAVLRSLASMGYNAMLPFMLMARGFGAREVGTT 265

Query: 262 LSLLFVGGAFGKLLCGYLGARIG 284
           L++  V  AFG +L G L  + G
Sbjct: 266 LAIYAVASAFGGILGGRLSDKYG 288