BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0044.p (153 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3313 [R] COG1832 Predicted CoA-binding protein Rso Ralstonia ... 130 1e-30 Z1317 [R] COG1832 Predicted CoA-binding protein EcZ Escherichia ... 103 1e-22 ECs1049 [R] COG1832 Predicted CoA-binding protein Ecs Escherichi... 103 1e-22 yccU [R] COG1832 Predicted CoA-binding protein Eco Escherichia c... 103 2e-22 STM1078 [R] COG1832 Predicted CoA-binding protein Sty Salmonella... 100 1e-21 SPy0186 [R] COG1832 Predicted CoA-binding protein Spy Streptococ... 100 1e-21 L158834 [R] COG1832 Predicted CoA-binding protein Lla Lactococcu... 97 2e-20 YPO1443 [R] COG1832 Predicted CoA-binding protein Ype Yersinia p... 95 4e-20 BH2141 [R] COG1832 Predicted CoA-binding protein Bha Bacillus ha... 92 6e-19 lin1324 [R] COG1832 Predicted CoA-binding protein Lin Listeria i... 90 2e-18 >RSc3313 [R] COG1832 Predicted CoA-binding protein Rso Ralstonia solanacearum Length = 153 Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 69/122 (56%), Positives = 89/122 (72%) Query: 23 IAVVGLSNRPERASFDVAAYMQAAGYRIIAVNPMYAGQTILGEHCHASLVQASAALAGEG 82 IAVVGLS RP R S+DVA Y+Q AGYRI+ VNP +AG+ +LGE C A+L +A+ LA G Sbjct: 23 IAVVGLSPRPTRPSYDVARYLQQAGYRIVPVNPQHAGEDVLGEPCFATLAEAATTLAAAG 82 Query: 83 LRIAIVDCFRKSADIPPVVEEAIAIGADCVWMQLDIVHEEAAARARAAGLKVVMDKCIKI 142 RI +VD FR++ + PVV EA A+G +W+QL IV++EA A ARAAG+ V D+C KI Sbjct: 83 RRIDLVDIFRRAEHVLPVVREAAALGVGGIWVQLGIVNDEAMAVARAAGIPAVQDRCTKI 142 Query: 143 EH 144 EH Sbjct: 143 EH 144 >Z1317 [R] COG1832 Predicted CoA-binding protein EcZ Escherichia coli O157:H7 EDL933 Length = 137 Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 53/121 (43%), Positives = 76/121 (62%), Gaps = 7/121 (5%) Query: 23 IAVVGLSNRPERASFDVAAYMQAAGYRIIAVNPMYAGQTILGEHCHASLVQASAALAGEG 82 IA+VG S++P+R S+ V Y+ GY +I V+P AG+T+LG+ + +L Sbjct: 16 IALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQGYGTLADVPE------ 69 Query: 83 LRIAIVDCFRKSADIPPVVEEAIAIGADCVWMQLDIVHEEAAARARAAGLKVVMDKCIKI 142 ++ +VD FR S V +EAIAIGA +WMQL +++E+AA AR AGL VVMD+C I Sbjct: 70 -KVDMVDVFRNSEAAWGVAQEAIAIGAKTLWMQLGVINEQAAVLARDAGLNVVMDRCPAI 128 Query: 143 E 143 E Sbjct: 129 E 129 >ECs1049 [R] COG1832 Predicted CoA-binding protein Ecs Escherichia coli O157:H7 Length = 137 Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 53/121 (43%), Positives = 76/121 (62%), Gaps = 7/121 (5%) Query: 23 IAVVGLSNRPERASFDVAAYMQAAGYRIIAVNPMYAGQTILGEHCHASLVQASAALAGEG 82 IA+VG S++P+R S+ V Y+ GY +I V+P AG+T+LG+ + +L Sbjct: 16 IALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQGYGTLADVPE------ 69 Query: 83 LRIAIVDCFRKSADIPPVVEEAIAIGADCVWMQLDIVHEEAAARARAAGLKVVMDKCIKI 142 ++ +VD FR S V +EAIAIGA +WMQL +++E+AA AR AGL VVMD+C I Sbjct: 70 -KVDMVDVFRNSEAAWGVAQEAIAIGAKTLWMQLGVINEQAAVLARDAGLNVVMDRCPAI 128 Query: 143 E 143 E Sbjct: 129 E 129 >yccU [R] COG1832 Predicted CoA-binding protein Eco Escherichia coli K12 Length = 164 Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 53/121 (43%), Positives = 76/121 (62%), Gaps = 7/121 (5%) Query: 23 IAVVGLSNRPERASFDVAAYMQAAGYRIIAVNPMYAGQTILGEHCHASLVQASAALAGEG 82 IA+VG S++P+R S+ V Y+ GY +I V+P AG+T+LG+ + +L Sbjct: 43 IALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQKGYGTLADVPE------ 96 Query: 83 LRIAIVDCFRKSADIPPVVEEAIAIGADCVWMQLDIVHEEAAARARAAGLKVVMDKCIKI 142 ++ +VD FR S V +EAIAIGA +WMQL +++E+AA AR AGL VVMD+C I Sbjct: 97 -KVDMVDVFRNSEAAWGVAQEAIAIGAKTLWMQLGVINEQAAVLARDAGLNVVMDRCPAI 155 Query: 143 E 143 E Sbjct: 156 E 156 >STM1078 [R] COG1832 Predicted CoA-binding protein Sty Salmonella typhimurium LT2 Length = 138 Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 52/121 (42%), Positives = 76/121 (62%), Gaps = 7/121 (5%) Query: 23 IAVVGLSNRPERASFDVAAYMQAAGYRIIAVNPMYAGQTILGEHCHASLVQASAALAGEG 82 IA+VG S++P+R S+ V Y+ GY +I V P AG+T+LG+ +A+L Sbjct: 17 IALVGASDKPDRPSYRVMKYLLEQGYHVIPVAPKVAGKTLLGQQGYATLADIPE------ 70 Query: 83 LRIAIVDCFRKSADIPPVVEEAIAIGADCVWMQLDIVHEEAAARARAAGLKVVMDKCIKI 142 ++ +VD FR S V +EAIAIGA +W+QL +++E+AA AR AG+ VVMD+C I Sbjct: 71 -KVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQLGVINEQAAVLARDAGMTVVMDRCPAI 129 Query: 143 E 143 E Sbjct: 130 E 130 >SPy0186 [R] COG1832 Predicted CoA-binding protein Spy Streptococcus pyogenes M1 GAS Length = 151 Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 57/137 (41%), Positives = 84/137 (61%), Gaps = 8/137 (5%) Query: 9 STSSLPSHVHGKPIIAVVGLSNRPERASFDVAAYMQAAGYRIIAVNPMYAGQTILGEHCH 68 S L +++ IAVVGLS+R + A++ VA +MQA YRII VNP AGQ ILGE + Sbjct: 9 SEDVLKAYLESAKTIAVVGLSDRKDTAAYGVAKFMQAMDYRIIPVNPKLAGQLILGEKVY 68 Query: 69 ASLVQASAALAGEGLRIAIVDCFRKSADIPPVVEEAIAIGADCVWMQLDIVHEEAAARAR 128 AS+ A+ E + IVD FR+S +P V + +A A W QL + ++EA R Sbjct: 69 ASI----KAIPFE---VDIVDVFRRSEFLPEVARDFLAGQAKVFWAQLGLENQEAQTILR 121 Query: 129 AAGLK-VVMDKCIKIEH 144 +AG + +VM++C+KI++ Sbjct: 122 SAGKEAIVMNRCLKIDY 138 >L158834 [R] COG1832 Predicted CoA-binding protein Lla Lactococcus lactis Length = 145 Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 53/132 (40%), Positives = 77/132 (58%), Gaps = 8/132 (6%) Query: 15 SHVHGKPIIAVVGLSNRPERASFDVAAYMQAAGYRIIAVNPMYAGQTILGEHCHASLVQA 74 ++ IIAVVG+S++ +R+SF +A +Q GY +I VNP AG+ +LGE +AS+ + Sbjct: 14 DYLKNAKIIAVVGISDKTDRSSFLIAQGLQQNGYHVIPVNPRLAGRELLGEKVYASIKEV 73 Query: 75 SAALAGEGLRIAIVDCFRKSADIPPVVEEAIAIGADCVWMQLDIVHEEAAARARAAGL-K 133 I IVD FR+S + V + I AD W QL + +EA R AG K Sbjct: 74 P-------FHIDIVDIFRRSEFLADVARDFIETDADIFWAQLGLQSQEAEQILREAGRNK 126 Query: 134 VVMDKCIKIEHA 145 +VM++CIKIE+A Sbjct: 127 IVMNRCIKIEYA 138 >YPO1443 [R] COG1832 Predicted CoA-binding protein Ype Yersinia pestis Length = 138 Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 52/121 (42%), Positives = 75/121 (61%), Gaps = 7/121 (5%) Query: 23 IAVVGLSNRPERASFDVAAYMQAAGYRIIAVNPMYAGQTILGEHCHASLVQASAALAGEG 82 IA+VG S+ P R S+ V AY+ GY++ VNP AG+ +LG+ +A L A Sbjct: 16 IALVGASDIPSRPSYRVMAYLLQQGYQVTPVNPKLAGELLLGQLVYAELADIPHA----- 70 Query: 83 LRIAIVDCFRKSADIPPVVEEAIAIGADCVWMQLDIVHEEAAARARAAGLKVVMDKCIKI 142 I +VD FR S + ++AIAIGA +W+Q+ +++E+AA A AGL+VVMD+C KI Sbjct: 71 --IDMVDVFRNSDAAYCIAQDAIAIGAKVLWLQIGVINEQAAILATDAGLQVVMDRCPKI 128 Query: 143 E 143 E Sbjct: 129 E 129 >BH2141 [R] COG1832 Predicted CoA-binding protein Bha Bacillus halodurans Length = 137 Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 52/123 (42%), Positives = 70/123 (56%), Gaps = 9/123 (7%) Query: 23 IAVVGLSNRPERASFDVAAYMQAAGYRIIAVNPMYAGQTILGEHCHASLVQASAALAGEG 82 IAVVGLS P+R S+ V+A MQ AGY II VNP +LGE SL A Sbjct: 20 IAVVGLSGNPDRTSYMVSAAMQHAGYEIIPVNPTV--DEVLGEKAVPSLQDIEGA----- 72 Query: 83 LRIAIVDCFRKSADIPPVVEEAIAIGADCVWMQLDIVHEEAAARARAAGLKVVMDKCIKI 142 + IV+ FR+S +P V E + IGA W QL + ++EA + G+ +M++CIK+ Sbjct: 73 --VDIVNVFRRSEHLPDVARETVEIGAPVFWAQLGLENKEAYDYLQQHGVTSIMNRCIKV 130 Query: 143 EHA 145 EHA Sbjct: 131 EHA 133 >lin1324 [R] COG1832 Predicted CoA-binding protein Lin Listeria innocua Length = 136 Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 51/121 (42%), Positives = 67/121 (55%), Gaps = 9/121 (7%) Query: 22 IIAVVGLSNRPERASFDVAAYMQAAGYRIIAVNPMYAGQTILGEHCHASLVQASAALAGE 81 +IAVVGLS++P+R S+ V+ MQ AGY+II VNP ILGE +A L Sbjct: 18 VIAVVGLSDKPDRTSYRVSQIMQQAGYKIIPVNP--NANEILGE-------KAVKRLTDI 68 Query: 82 GLRIAIVDCFRKSADIPPVVEEAIAIGADCVWMQLDIVHEEAAARARAAGLKVVMDKCIK 141 + IV+ FR+S +P + E I AD W QL IV++EA G VMD CIK Sbjct: 69 KEHVDIVNVFRRSEFLPDIAREFDQIDADVFWAQLGIVNQEAFDFLTEKGYSTVMDYCIK 128 Query: 142 I 142 + Sbjct: 129 V 129