BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0022.0038.p         (102 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0286 Non COG                                                        59   3e-09

>RSc0286 Non COG
          Length = 238

 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 42/53 (79%), Gaps = 1/53 (1%)

Query: 5  NAKYHKQAGGTLLGLILGLIVGLGIAVGVALMITKSPIPFVNKV-ARPERADP 56
          +++   Q GGT LGL+LGLIVGL IAV VA+ ITK+P+PFV++  A+P+ ++P
Sbjct: 7  SSRARSQRGGTFLGLVLGLIVGLAIAVVVAVYITKAPVPFVSRNGAQPKPSEP 59