BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0037.p (213 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0287 [J] COG0018 Arginyl-tRNA synthetase Rso Ralstonia solana... 285 5e-77 XF0147 [J] COG0018 Arginyl-tRNA synthetase Xfa Xylella fastidios... 197 1e-50 BH3808 [J] COG0018 Arginyl-tRNA synthetase Bha Bacillus halodurans 177 2e-44 BS_argS [J] COG0018 Arginyl-tRNA synthetase Bsu Bacillus subtilis 169 4e-42 SA0564 [J] COG0018 Arginyl-tRNA synthetase Sau Staphylococcus au... 163 3e-40 lin2706 [J] COG0018 Arginyl-tRNA synthetase Lin Listeria innocua 155 6e-38 aq_923 [J] COG0018 Arginyl-tRNA synthetase Aae Aquifex aeolicus 150 3e-36 Rv1292 [J] COG0018 Arginyl-tRNA synthetase Mtu Mycobacterium tub... 149 3e-36 MT1331 [J] COG0018 Arginyl-tRNA synthetase MtC Mycobacterium tub... 149 3e-36 ML1127 [J] COG0018 Arginyl-tRNA synthetase Mle Mycobacterium leprae 144 2e-34 >RSc0287 [J] COG0018 Arginyl-tRNA synthetase Rso Ralstonia solanacearum Length = 600 Score = 285 bits (729), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 148/237 (62%), Positives = 177/237 (74%), Gaps = 25/237 (10%) Query: 1 VGIPQGYPDYVLHKMVTVMRNGEEVKISKRAGSYVTLRDLIEWSAGEPVEGQERD----- 55 +GIP+GYPDYVLHKMVTVM++G EVKISKRAGSYVT+RDLIEWS G+ D Sbjct: 365 LGIPKGYPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIEWSNGDAESEAGVDTIRAC 424 Query: 56 -----------LTRGRDAVRFFLISRKADTEFVFDVDLALAQSDENPVYYVQYAHARICT 104 TRGRDAVRFFL+SRKADTEFVFDVDLAL QSDENPVYYVQYAHARIC+ Sbjct: 425 VESGAPNWPGRFTRGRDAVRFFLLSRKADTEFVFDVDLALKQSDENPVYYVQYAHARICS 484 Query: 105 VL----GKSGVDEEALKSSADLSLLT----APREATLLAKLAEYPDMLAHALQELGPHQV 156 V + G D +L + ADL+ + +P+ L+ ++A +PDMLA A +EL PH V Sbjct: 485 VFEQWHAREGGDAASL-AGADLAAVAGPEASPQAVALVQRIAAFPDMLADAARELAPHAV 543 Query: 157 AFYLRDLAGELHSYYNAERVLVDDVPTRSARLALLSATRQVLRNGLALLGVSAPARM 213 AFYLRDLAG+ H++YNA+RVLVDD + ARLALL+ATRQVLRNGLA++GVSAP +M Sbjct: 544 AFYLRDLAGDFHAFYNADRVLVDDDAVKRARLALLAATRQVLRNGLAVIGVSAPQKM 600 >XF0147 [J] COG0018 Arginyl-tRNA synthetase Xfa Xylella fastidiosa 9a5c Length = 586 Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 99/216 (45%), Positives = 145/216 (67%), Gaps = 17/216 (7%) Query: 1 VGIPQGYPDYVLHKMVTVMRNGEEVKISKRAGSYVTLRDLIEWSAGEPVEGQERDLTRGR 60 +GIP G+P+YVLH+MVTVMR GEEVK+SKR+G YVTLRDLIE ++ Sbjct: 385 IGIPPGWPEYVLHQMVTVMRGGEEVKLSKRSGGYVTLRDLIEETS--------------T 430 Query: 61 DAVRFFLISRKADTEFVFDVDLALAQSDENPVYYVQYAHARICTVLGKS---GVDEEALK 117 DA R+FLI+RK D++ FD+DLA +S++NPV+YVQYA+AR+C+++ ++ ++ + Sbjct: 431 DATRWFLIARKPDSQLTFDIDLARQKSNDNPVFYVQYAYARVCSLMHQAHEKNLNYDQTS 490 Query: 118 SSADLSLLTAPREATLLAKLAEYPDMLAHALQELGPHQVAFYLRDLAGELHSYYNAERVL 177 A L L+ L+ +++ YP+++ A + L PH +A YLR+LA H++Y+ VL Sbjct: 491 GMASLDQLSDNTSLCLMIEISRYPEIVQIACELLEPHLIAQYLRELAHAFHTWYHNTPVL 550 Query: 178 VDDVPTRSARLALLSATRQVLRNGLALLGVSAPARM 213 V++ R+A+L L ATRQVL NGL LLGV P +M Sbjct: 551 VENAVERNAKLTLACATRQVLANGLNLLGVGTPEKM 586 >BH3808 [J] COG0018 Arginyl-tRNA synthetase Bha Bacillus halodurans Length = 556 Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 94/214 (43%), Positives = 138/214 (64%), Gaps = 15/214 (7%) Query: 1 VGIPQGYPDYVLHKMVTVMRNGEEVKISKRAGSYVTLRDLIEWSAGEPVEGQERDLTRGR 60 +G + D + +MV++ +NGE+VK+SKR G VTLRDL+E G Sbjct: 357 LGYEKDQLDVQIIQMVSLFQNGEKVKMSKRTGKAVTLRDLME--------------EVGI 402 Query: 61 DAVRFFLISRKADTEFVFDVDLALAQSDENPVYYVQYAHARICTVLGKSGVDEEALKSSA 120 DA R+F R AD+ FD+DLA+++S+ENPVYYVQYAHAR+C++L K + S Sbjct: 403 DATRYFFAMRSADSHLDFDMDLAVSKSNENPVYYVQYAHARVCSMLRKGKELGLSFDEST 462 Query: 121 DLSLLTAPREATLLAKLAEYPDMLAHALQELGPHQVAFYLRDLAGELHSYYNAERVLVDD 180 DLS + + +E LL K+ E+P+++A A Q+ PH++ Y+ +LA LHS+YNAE+V+ + Sbjct: 463 DLSPIASEKEYDLLKKIGEFPEVVAEAAQKQMPHRITNYVHELASTLHSFYNAEQVINPE 522 Query: 181 VPTRS-ARLALLSATRQVLRNGLALLGVSAPARM 213 +S ARLAL+ AT+ L+N L+L+GV AP RM Sbjct: 523 NDEQSKARLALMKATQVTLKNALSLVGVEAPERM 556 >BS_argS [J] COG0018 Arginyl-tRNA synthetase Bsu Bacillus subtilis Length = 556 Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 95/216 (43%), Positives = 138/216 (63%), Gaps = 19/216 (8%) Query: 1 VGIPQGYPDYVLHKMVTVMRNGEEVKISKRAGSYVTLRDLIEWSAGEPVEGQERDLTRGR 60 +G +G + + ++V + +NGE++K+SKR G VT+RDLIE G Sbjct: 357 LGYEKGTLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIE--------------EVGL 402 Query: 61 DAVRFFLISRKADTEFVFDVDLALAQSDENPVYYVQYAHARICTVLGKSGVDEEALKSSA 120 DAVR+F R ADT FD+DLA++ S+ENPVYY QYAHARIC++L + +E+ LK +A Sbjct: 403 DAVRYFFAMRSADTHMDFDLDLAVSTSNENPVYYAQYAHARICSMLRQG--EEQGLKPAA 460 Query: 121 DL--SLLTAPREATLLAKLAEYPDMLAHALQELGPHQVAFYLRDLAGELHSYYNAERVLV 178 DL S + + +E LL + +P+ +A A ++ PH+V Y+ DLA LHS+YNAE+V+ Sbjct: 461 DLDFSHIQSEKEYDLLKTIGGFPEAVAEAAEKRIPHRVTNYIYDLASALHSFYNAEKVID 520 Query: 179 DDVPTRS-ARLALLSATRQVLRNGLALLGVSAPARM 213 + +S ARLAL+ AT+ L N L L+GVSAP +M Sbjct: 521 PENEEKSRARLALMKATQITLNNALQLIGVSAPEKM 556 >SA0564 [J] COG0018 Arginyl-tRNA synthetase Sau Staphylococcus aureus N315 Length = 553 Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 126/212 (59%), Gaps = 14/212 (6%) Query: 2 GIPQGYPDYVLHKMVTVMRNGEEVKISKRAGSYVTLRDLIEWSAGEPVEGQERDLTRGRD 61 G+ + + +MV +M NG+EVK+SKR G+ +TLR++++ G D Sbjct: 356 GVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMD--------------EVGVD 401 Query: 62 AVRFFLISRKADTEFVFDVDLALAQSDENPVYYVQYAHARICTVLGKSGVDEEALKSSAD 121 A R+FL R D+ F FD++LA QS +NPVYY QYAHARIC++L ++ + ++ D Sbjct: 402 AARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAAND 461 Query: 122 LSLLTAPREATLLAKLAEYPDMLAHALQELGPHQVAFYLRDLAGELHSYYNAERVLVDDV 181 + +T + LL K+A++ + A + H++ Y++DLA H +YNAE+VL DD+ Sbjct: 462 FTTITNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLAAHFHKFYNAEKVLTDDI 521 Query: 182 PTRSARLALLSATRQVLRNGLALLGVSAPARM 213 A +A++ A R L+N LA++GVSAP M Sbjct: 522 EKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553 >lin2706 [J] COG0018 Arginyl-tRNA synthetase Lin Listeria innocua Length = 556 Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 90/203 (44%), Positives = 125/203 (61%), Gaps = 19/203 (9%) Query: 14 KMVTVMRNGEEVKISKRAGSYVTLRDLIEWSAGEPVEGQERDLTRGRDAVRFFLISRKAD 73 ++V + +G +VK+SKR G VT+RDLIE G DA R+F R +D Sbjct: 370 QLVHLFEDGVQVKMSKRTGKSVTMRDLIE--------------EVGLDATRYFFAMRSSD 415 Query: 74 TEFVFDVDLALAQSDENPVYYVQYAHARICTVLGKSGVDEEALKSS--ADLSLLTAPREA 131 T FD+ LA + S++NPVYYVQYAHARI ++L +SG E+ L+ S A++SLL E Sbjct: 416 THMNFDMSLAKSTSNDNPVYYVQYAHARISSIL-RSG-KEQGLEVSKDANMSLLETEAEY 473 Query: 132 TLLAKLAEYPDMLAHALQELGPHQVAFYLRDLAGELHSYYNAERVL-VDDVPTRSARLAL 190 LL L E+ D++A A + PH++ YL DLA H +YN+ +VL +D++ ARLAL Sbjct: 474 DLLKVLGEFADVVAEAAVKRAPHRIVRYLNDLATAFHRFYNSNKVLDMDNLEVTKARLAL 533 Query: 191 LSATRQVLRNGLALLGVSAPARM 213 + + LRNGL LLGVSAP +M Sbjct: 534 IKTAQITLRNGLTLLGVSAPEKM 556 >aq_923 [J] COG0018 Arginyl-tRNA synthetase Aae Aquifex aeolicus Length = 583 Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 87/217 (40%), Positives = 126/217 (58%), Gaps = 22/217 (10%) Query: 3 IPQGYPDYVLHKMVTVMRNGEEVKISKRAGSYVTLRDLIEWSAGEPVEGQERDLTRGRDA 62 IP+ + + +L +MV + R G+EVK+SKRAG++VTLR+L++ G+DA Sbjct: 383 IPEDWLEILLVQMVKLFREGKEVKMSKRAGTFVTLRELLD--------------EVGKDA 428 Query: 63 VRFFLISRKADTEFVFDVDLALAQSDENPVYYVQYAHARICTVLG------KSGVDEEAL 116 VRF +++++DT FDV+ A +S ENPVYYVQYAHARI + K V E L Sbjct: 429 VRFIFLTKRSDTPLDFDVEKAKEKSSENPVYYVQYAHARISGIFREFKERYKKDVSVEEL 488 Query: 117 KSSADLSLLTAPREATLLAKLAEYPDMLAHALQELGPHQVAFYLRDLAGELHSYYNAERV 176 + + L E L+ K+ + D L + PH + +YL DLAG+ H YYN R+ Sbjct: 489 INY--VQHLEEEAEIKLIKKVLFFKDELVDITLKREPHLLTYYLIDLAGDFHHYYNHHRI 546 Query: 177 LVDDVPTRSARLALLSATRQVLRNGLALLGVSAPARM 213 L + +RLAL+ ++V+R GL L+GVSAP RM Sbjct: 547 LGMEENVMFSRLALVKGIKEVVRLGLNLMGVSAPERM 583 >Rv1292 [J] COG0018 Arginyl-tRNA synthetase Mtu Mycobacterium tuberculosis H37Rv Length = 550 Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 92/209 (44%), Positives = 129/209 (61%), Gaps = 23/209 (11%) Query: 11 VLHKMVTVMRNGEEVKISKRAGSYVTLRDLIEWSAGEPVEGQERDLTRGRDAVRFFLISR 70 ++ +MV ++R+G+ V++SKRAG+ +TL DL+E G DA R+ LI Sbjct: 359 LIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVE--------------AIGVDAARYSLIRS 404 Query: 71 KADTEFVFDVDLAL--AQSDENPVYYVQYAHARICTVLGKSGVDEEALKSSADLSLLTAP 128 DT D+DLAL + S+ENPVYYVQYAHAR+ + L ++ + + + L LL Sbjct: 405 SVDT--AIDIDLALWSSASNENPVYYVQYAHARL-SALARNAAELALIPDTNHLELLNHD 461 Query: 129 REATLLAKLAEYPDMLAHALQELGPHQVAFYLRDLAGELHSYYNAERVLV--DDVPT--R 184 +E TLL L E+P +L A PH+V YL DLAG+ H +Y++ RVL D+ PT Sbjct: 462 KEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYHRFYDSCRVLPQGDEQPTDLH 521 Query: 185 SARLALLSATRQVLRNGLALLGVSAPARM 213 +ARLAL ATRQV+ NGLA++GV+AP RM Sbjct: 522 TARLALCQATRQVIANGLAIIGVTAPERM 550 >MT1331 [J] COG0018 Arginyl-tRNA synthetase MtC Mycobacterium tuberculosis CDC1551 Length = 550 Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 92/209 (44%), Positives = 129/209 (61%), Gaps = 23/209 (11%) Query: 11 VLHKMVTVMRNGEEVKISKRAGSYVTLRDLIEWSAGEPVEGQERDLTRGRDAVRFFLISR 70 ++ +MV ++R+G+ V++SKRAG+ +TL DL+E G DA R+ LI Sbjct: 359 LIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVE--------------AIGVDAARYSLIRS 404 Query: 71 KADTEFVFDVDLAL--AQSDENPVYYVQYAHARICTVLGKSGVDEEALKSSADLSLLTAP 128 DT D+DLAL + S+ENPVYYVQYAHAR+ + L ++ + + + L LL Sbjct: 405 SVDT--AIDIDLALWSSASNENPVYYVQYAHARL-SALARNAAELALIPDTNHLELLNHD 461 Query: 129 REATLLAKLAEYPDMLAHALQELGPHQVAFYLRDLAGELHSYYNAERVLV--DDVPT--R 184 +E TLL L E+P +L A PH+V YL DLAG+ H +Y++ RVL D+ PT Sbjct: 462 KEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYHRFYDSCRVLPQGDEQPTDLH 521 Query: 185 SARLALLSATRQVLRNGLALLGVSAPARM 213 +ARLAL ATRQV+ NGLA++GV+AP RM Sbjct: 522 TARLALCQATRQVIANGLAIIGVTAPERM 550 >ML1127 [J] COG0018 Arginyl-tRNA synthetase Mle Mycobacterium leprae Length = 550 Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 86/207 (41%), Positives = 124/207 (59%), Gaps = 19/207 (9%) Query: 11 VLHKMVTVMRNGEEVKISKRAGSYVTLRDLIEWSAGEPVEGQERDLTRGRDAVRFFLISR 70 ++ +MV ++ +G+ V++SKR+G+ +TL DL+E G DA R+ LI Sbjct: 359 LIGQMVNLVCDGQLVRMSKRSGNVITLDDLVE--------------AIGVDAARYSLIRS 404 Query: 71 KADTEFVFDVDLALAQSDENPVYYVQYAHARICTVLGKSGVDEEALKSSADLSLLTAPRE 130 DT D+ L + S+ENPVYYVQYAHAR+ + L ++ + + + L LL+ +E Sbjct: 405 SVDTPIDIDLALWSSSSNENPVYYVQYAHARL-SALARNAAEFGLIPDTGHLELLSHDKE 463 Query: 131 ATLLAKLAEYPDMLAHALQELGPHQVAFYLRDLAGELHSYYNAERVLV--DDVPT--RSA 186 LL + E+P +L A PH+V YL DLAG+ H +Y++ RVL D+ PT +A Sbjct: 464 GALLRTVGEFPQVLKTAAALREPHRVCRYLEDLAGDYHRFYDSCRVLPQGDEKPTDLHTA 523 Query: 187 RLALLSATRQVLRNGLALLGVSAPARM 213 RLAL A RQV+ NGLA+LGVSAP RM Sbjct: 524 RLALCQANRQVIANGLAILGVSAPERM 550