BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0358.p (55 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2446 [J] COG0267 Ribosomal protein L33 Rso Ralstonia solanace... 96 2e-20 NMB0322 [J] COG0267 Ribosomal protein L33 Nme Neisseria meningit... 84 9e-17 NMA2165 [J] COG0267 Ribosomal protein L33 NmA Neisseria meningit... 84 9e-17 YPO0051 [J] COG0267 Ribosomal protein L33 Ype Yersinia pestis 82 2e-16 rpmG [J] COG0267 Ribosomal protein L33 Eco Escherichia coli K12 82 4e-16 ZrpmG [J] COG0267 Ribosomal protein L33 EcZ Escherichia coli O15... 82 4e-16 STM3727 [J] COG0267 Ribosomal protein L33 Sty Salmonella typhimu... 82 4e-16 ECs4511 [J] COG0267 Ribosomal protein L33 Ecs Escherichia coli O... 82 4e-16 PM1150 [J] COG0267 Ribosomal protein L33 Pmu Pasteurella multocida 77 1e-14 HI0950 [J] COG0267 Ribosomal protein L33 Hin Haemophilus influenzae 76 2e-14 >RSc2446 [J] COG0267 Ribosomal protein L33 Rso Ralstonia solanacearum Length = 56 Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 47/54 (87%), Positives = 49/54 (90%) Query: 2 AKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKISIMKFDPKARKHVEYKETKIK 55 +K GRDKIKLESTAGTGHFYTTTKNKRT PEK+ IMKFDP ARKHV YKETKIK Sbjct: 3 SKGGRDKIKLESTAGTGHFYTTTKNKRTKPEKMEIMKFDPVARKHVAYKETKIK 56 >NMB0322 [J] COG0267 Ribosomal protein L33 Nme Neisseria meningitidis MC58 Length = 51 Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 41/50 (82%), Positives = 44/50 (88%) Query: 6 RDKIKLESTAGTGHFYTTTKNKRTTPEKISIMKFDPKARKHVEYKETKIK 55 RDKIKLES+AGTGHFYTTTKNKRT P K+ I KFDP ARKHV YKETK+K Sbjct: 2 RDKIKLESSAGTGHFYTTTKNKRTMPGKLEIKKFDPVARKHVVYKETKLK 51 >NMA2165 [J] COG0267 Ribosomal protein L33 NmA Neisseria meningitidis Z2491 Length = 51 Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 41/50 (82%), Positives = 44/50 (88%) Query: 6 RDKIKLESTAGTGHFYTTTKNKRTTPEKISIMKFDPKARKHVEYKETKIK 55 RDKIKLES+AGTGHFYTTTKNKRT P K+ I KFDP ARKHV YKETK+K Sbjct: 2 RDKIKLESSAGTGHFYTTTKNKRTMPGKLEIKKFDPVARKHVVYKETKLK 51 >YPO0051 [J] COG0267 Ribosomal protein L33 Ype Yersinia pestis Length = 55 Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 40/55 (72%), Positives = 45/55 (81%) Query: 1 MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKISIMKFDPKARKHVEYKETKIK 55 MAK R+KIKL S+AGTGHFYTTTKNKRT PEK+ + KFDP R+HV YKE KIK Sbjct: 1 MAKGVREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVLYKEAKIK 55 >rpmG [J] COG0267 Ribosomal protein L33 Eco Escherichia coli K12 Length = 55 Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 40/55 (72%), Positives = 45/55 (81%) Query: 1 MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKISIMKFDPKARKHVEYKETKIK 55 MAK R+KIKL S+AGTGHFYTTTKNKRT PEK+ + KFDP R+HV YKE KIK Sbjct: 1 MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAKIK 55 >ZrpmG [J] COG0267 Ribosomal protein L33 EcZ Escherichia coli O157:H7 EDL933 Length = 55 Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 40/55 (72%), Positives = 45/55 (81%) Query: 1 MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKISIMKFDPKARKHVEYKETKIK 55 MAK R+KIKL S+AGTGHFYTTTKNKRT PEK+ + KFDP R+HV YKE KIK Sbjct: 1 MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAKIK 55 >STM3727 [J] COG0267 Ribosomal protein L33 Sty Salmonella typhimurium LT2 Length = 55 Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 40/55 (72%), Positives = 45/55 (81%) Query: 1 MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKISIMKFDPKARKHVEYKETKIK 55 MAK R+KIKL S+AGTGHFYTTTKNKRT PEK+ + KFDP R+HV YKE KIK Sbjct: 1 MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAKIK 55 >ECs4511 [J] COG0267 Ribosomal protein L33 Ecs Escherichia coli O157:H7 Length = 55 Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 40/55 (72%), Positives = 45/55 (81%) Query: 1 MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKISIMKFDPKARKHVEYKETKIK 55 MAK R+KIKL S+AGTGHFYTTTKNKRT PEK+ + KFDP R+HV YKE KIK Sbjct: 1 MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAKIK 55 >PM1150 [J] COG0267 Ribosomal protein L33 Pmu Pasteurella multocida Length = 56 Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 39/54 (72%), Positives = 42/54 (77%) Query: 2 AKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKISIMKFDPKARKHVEYKETKIK 55 AK R+KIKL STA TGHFYTTTKNKR PEK+ I K+DP RKHV YKE KIK Sbjct: 3 AKGPREKIKLVSTAETGHFYTTTKNKRNMPEKMEIKKYDPVVRKHVVYKEAKIK 56 >HI0950 [J] COG0267 Ribosomal protein L33 Hin Haemophilus influenzae Length = 56 Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 38/54 (70%), Positives = 41/54 (75%) Query: 2 AKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKISIMKFDPKARKHVEYKETKIK 55 AK R+KI+L STA TGHFYTT KNKR PEK+ I KFDP RKHV YKE KIK Sbjct: 3 AKGAREKIRLVSTAETGHFYTTDKNKRNMPEKMEIKKFDPVVRKHVIYKEAKIK 56