BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0343.p (90 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3010 [J] COG0186 Ribosomal protein S17 Rso Ralstonia solanace... 120 9e-28 PM1406 [J] COG0186 Ribosomal protein S17 Pmu Pasteurella multocida 114 6e-26 HI0786 [J] COG0186 Ribosomal protein S17 Hin Haemophilus influenzae 111 3e-25 rpsQ [J] COG0186 Ribosomal protein S17 Eco Escherichia coli K12 110 6e-25 ZrpsQ [J] COG0186 Ribosomal protein S17 EcZ Escherichia coli O15... 110 6e-25 ECs4176 [J] COG0186 Ribosomal protein S17 Ecs Escherichia coli O... 110 6e-25 NMB0151 [J] COG0186 Ribosomal protein S17 Nme Neisseria meningit... 110 7e-25 NMA0120 [J] COG0186 Ribosomal protein S17 NmA Neisseria meningit... 110 7e-25 YPO0219 [J] COG0186 Ribosomal protein S17 Ype Yersinia pestis 110 7e-25 STM3431 [J] COG0186 Ribosomal protein S17 Sty Salmonella typhimu... 110 7e-25 >RSc3010 [J] COG0186 Ribosomal protein S17 Rso Ralstonia solanacearum Length = 89 Score = 120 bits (300), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 54/83 (65%), Positives = 70/83 (84%) Query: 8 ALKRTLIGKVVSDKMDKTVTVEIERQMKHPLYGKIIKRTKKYHAHDEQNSAKAGDVVEIT 67 +LKRTL+G+VVS KMDKTVTV +E ++KHPLYGK + R+KKYHAHDE N K GD VEI Sbjct: 7 SLKRTLVGRVVSSKMDKTVTVLVENRVKHPLYGKYVVRSKKYHAHDEANQYKEGDRVEIV 66 Query: 68 ESRPISKTKSWTVTRVVQEAQIV 90 ESRPIS+TK+W V+R+V+ A+++ Sbjct: 67 ESRPISRTKAWVVSRLVEAARVI 89 >PM1406 [J] COG0186 Ribosomal protein S17 Pmu Pasteurella multocida Length = 85 Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 52/79 (65%), Positives = 64/79 (81%) Query: 11 RTLIGKVVSDKMDKTVTVEIERQMKHPLYGKIIKRTKKYHAHDEQNSAKAGDVVEITESR 70 R++ GKVVSDKMDK+ V IER++KHPLYGK I+RT K H HDE N AK GD+VEI E R Sbjct: 6 RSVQGKVVSDKMDKSFVVAIERKVKHPLYGKFIRRTTKLHVHDENNEAKLGDIVEIKECR 65 Query: 71 PISKTKSWTVTRVVQEAQI 89 P+SKTKSWT+ RVV++A + Sbjct: 66 PLSKTKSWTLVRVVEKAVV 84 >HI0786 [J] COG0186 Ribosomal protein S17 Hin Haemophilus influenzae Length = 85 Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 52/79 (65%), Positives = 63/79 (79%) Query: 11 RTLIGKVVSDKMDKTVTVEIERQMKHPLYGKIIKRTKKYHAHDEQNSAKAGDVVEITESR 70 R++ GKVVSDKM+K+ V IER++KHPLYGK I+RT K H HDE N AK GD VEI E R Sbjct: 6 RSVQGKVVSDKMEKSFVVAIERKVKHPLYGKFIRRTTKLHVHDENNEAKVGDTVEIRECR 65 Query: 71 PISKTKSWTVTRVVQEAQI 89 P+SKTKSWT+ RVV++A I Sbjct: 66 PLSKTKSWTLVRVVEKAVI 84 >rpsQ [J] COG0186 Ribosomal protein S17 Eco Escherichia coli K12 Length = 84 Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 51/77 (66%), Positives = 61/77 (79%) Query: 11 RTLIGKVVSDKMDKTVTVEIERQMKHPLYGKIIKRTKKYHAHDEQNSAKAGDVVEITESR 70 RTL G+VVSDKM+K++ V IER +KHP+YGK IKRT K H HDE N GDVVEI E R Sbjct: 6 RTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDVVEIRECR 65 Query: 71 PISKTKSWTVTRVVQEA 87 P+SKTKSWT+ RVV++A Sbjct: 66 PLSKTKSWTLVRVVEKA 82 >ZrpsQ [J] COG0186 Ribosomal protein S17 EcZ Escherichia coli O157:H7 EDL933 Length = 84 Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 51/77 (66%), Positives = 61/77 (79%) Query: 11 RTLIGKVVSDKMDKTVTVEIERQMKHPLYGKIIKRTKKYHAHDEQNSAKAGDVVEITESR 70 RTL G+VVSDKM+K++ V IER +KHP+YGK IKRT K H HDE N GDVVEI E R Sbjct: 6 RTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDVVEIRECR 65 Query: 71 PISKTKSWTVTRVVQEA 87 P+SKTKSWT+ RVV++A Sbjct: 66 PLSKTKSWTLVRVVEKA 82 >ECs4176 [J] COG0186 Ribosomal protein S17 Ecs Escherichia coli O157:H7 Length = 84 Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 51/77 (66%), Positives = 61/77 (79%) Query: 11 RTLIGKVVSDKMDKTVTVEIERQMKHPLYGKIIKRTKKYHAHDEQNSAKAGDVVEITESR 70 RTL G+VVSDKM+K++ V IER +KHP+YGK IKRT K H HDE N GDVVEI E R Sbjct: 6 RTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDVVEIRECR 65 Query: 71 PISKTKSWTVTRVVQEA 87 P+SKTKSWT+ RVV++A Sbjct: 66 PLSKTKSWTLVRVVEKA 82 >NMB0151 [J] COG0186 Ribosomal protein S17 Nme Neisseria meningitidis MC58 Length = 87 Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 53/78 (67%), Positives = 65/78 (83%) Query: 11 RTLIGKVVSDKMDKTVTVEIERQMKHPLYGKIIKRTKKYHAHDEQNSAKAGDVVEITESR 70 RTL GKVVSDKMDKTVTV +ER++KHPLYGKII+ + K HAHDE N GDVV I+ESR Sbjct: 8 RTLQGKVVSDKMDKTVTVLVERKVKHPLYGKIIRLSTKIHAHDENNQYGIGDVVVISESR 67 Query: 71 PISKTKSWTVTRVVQEAQ 88 P+SKTKSW V+ +V++A+ Sbjct: 68 PLSKTKSWVVSELVEKAR 85 >NMA0120 [J] COG0186 Ribosomal protein S17 NmA Neisseria meningitidis Z2491 Length = 87 Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 53/78 (67%), Positives = 65/78 (83%) Query: 11 RTLIGKVVSDKMDKTVTVEIERQMKHPLYGKIIKRTKKYHAHDEQNSAKAGDVVEITESR 70 RTL GKVVSDKMDKTVTV +ER++KHPLYGKII+ + K HAHDE N GDVV I+ESR Sbjct: 8 RTLQGKVVSDKMDKTVTVLVERKVKHPLYGKIIRLSTKIHAHDENNQYGIGDVVVISESR 67 Query: 71 PISKTKSWTVTRVVQEAQ 88 P+SKTKSW V+ +V++A+ Sbjct: 68 PLSKTKSWVVSELVEKAR 85 >YPO0219 [J] COG0186 Ribosomal protein S17 Ype Yersinia pestis Length = 84 Score = 110 bits (275), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 53/87 (60%), Positives = 65/87 (74%), Gaps = 5/87 (5%) Query: 1 MNDQVKQALKRTLIGKVVSDKMDKTVTVEIERQMKHPLYGKIIKRTKKYHAHDEQNSAKA 60 M DQ+ RTL G+VVSDKM+K++ V IER +KHP+YGK I+RT K H HDE N Sbjct: 1 MTDQI-----RTLQGRVVSDKMEKSMVVAIERVVKHPIYGKFIRRTTKLHVHDENNECGI 55 Query: 61 GDVVEITESRPISKTKSWTVTRVVQEA 87 GDVVEI E RP+SKTKSWT+ RVV++A Sbjct: 56 GDVVEIRECRPLSKTKSWTLVRVVEKA 82 >STM3431 [J] COG0186 Ribosomal protein S17 Sty Salmonella typhimurium LT2 Length = 84 Score = 110 bits (275), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 51/77 (66%), Positives = 61/77 (79%) Query: 11 RTLIGKVVSDKMDKTVTVEIERQMKHPLYGKIIKRTKKYHAHDEQNSAKAGDVVEITESR 70 RTL G+VVSDKM+K++ V IER +KHP+YGK IKRT K H HDE N GDVVEI E R Sbjct: 6 RTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKMHVHDENNECGIGDVVEIRECR 65 Query: 71 PISKTKSWTVTRVVQEA 87 P+SKTKSWT+ RVV++A Sbjct: 66 PLSKTKSWTLVRVVEKA 82