BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0340.p (179 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3007 [J] COG0094 Ribosomal protein L5 Rso Ralstonia solanacearum 325 2e-89 NMB0154 [J] COG0094 Ribosomal protein L5 Nme Neisseria meningiti... 295 2e-80 NMA0117 [J] COG0094 Ribosomal protein L5 NmA Neisseria meningiti... 295 3e-80 VC2584 [J] COG0094 Ribosomal protein L5 Vch Vibrio cholerae 275 3e-74 HI0790 [J] COG0094 Ribosomal protein L5 Hin Haemophilus influenzae 275 5e-74 STM3428 [J] COG0094 Ribosomal protein L5 Sty Salmonella typhimur... 274 7e-74 PM1403 [J] COG0094 Ribosomal protein L5 Pmu Pasteurella multocida 273 1e-73 PA4251 [J] COG0094 Ribosomal protein L5 Pae Pseudomonas aeruginosa 270 1e-72 YPO0222 [J] COG0094 Ribosomal protein L5 Ype Yersinia pestis 261 5e-70 rplE [J] COG0094 Ribosomal protein L5 Eco Escherichia coli K12 260 1e-69 >RSc3007 [J] COG0094 Ribosomal protein L5 Rso Ralstonia solanacearum Length = 180 Score = 325 bits (834), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 157/178 (88%), Positives = 168/178 (94%) Query: 2 ARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKIA 61 ARLQ+FYK+KVVA+L ++ YKSVMEVPRI KITLNMGL EAV DKK+IEHA GDLTKIA Sbjct: 3 ARLQEFYKEKVVAELIKQFGYKSVMEVPRITKITLNMGLGEAVNDKKVIEHATGDLTKIA 62 Query: 62 GQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGRA 121 GQKPVVTKARKAIAGFKIR+GYPIG MVTLRG RMYEFLDR ITV+LPRVRDFRGVSGRA Sbjct: 63 GQKPVVTKARKAIAGFKIRQGYPIGTMVTLRGQRMYEFLDRFITVSLPRVRDFRGVSGRA 122 Query: 122 FDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 FDGRGNYNIGVKEQIIFPEIEYDKIDALRG+NISITTTAK+D+EAKALLAAFKFPFRN Sbjct: 123 FDGRGNYNIGVKEQIIFPEIEYDKIDALRGLNISITTTAKSDEEAKALLAAFKFPFRN 180 >NMB0154 [J] COG0094 Ribosomal protein L5 Nme Neisseria meningitidis MC58 Length = 179 Score = 295 bits (756), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 139/178 (78%), Positives = 163/178 (91%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 MARL++FYK+ VV +L ++ YKSVMEVPRI KITLNMG+ EAVADKK++EHAV DL KI Sbjct: 1 MARLREFYKETVVPELVKQFGYKSVMEVPRIEKITLNMGVGEAVADKKVMEHAVSDLEKI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 AGQKPVVT ARK+IAGFKIR+ YP+GC VTLR +M+EFLDRLIT+ALPRVRDFRGVSG+ Sbjct: 61 AGQKPVVTVARKSIAGFKIRDNYPVGCKVTLRRDQMFEFLDRLITIALPRVRDFRGVSGK 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFR 178 +FDGRGNYN+GV+EQIIFPEIEYDKIDALRG+NI+ITTTAKTD+EAKALL+ FKFPF+ Sbjct: 121 SFDGRGNYNMGVREQIIFPEIEYDKIDALRGLNITITTTAKTDEEAKALLSLFKFPFK 178 >NMA0117 [J] COG0094 Ribosomal protein L5 NmA Neisseria meningitidis Z2491 Length = 179 Score = 295 bits (755), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 138/178 (77%), Positives = 163/178 (91%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 MARL++FYK+ VV +L ++ YKSVMEVPRI KITLNMG+ EA+ADKK++EHAV DL KI Sbjct: 1 MARLREFYKETVVPELVKQFGYKSVMEVPRIEKITLNMGVGEAIADKKVMEHAVSDLEKI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 AGQKPVVT ARK+IAGFKIR+ YP+GC VTLR +M+EFLDRLIT+ALPRVRDFRGVSG+ Sbjct: 61 AGQKPVVTVARKSIAGFKIRDNYPVGCKVTLRRDQMFEFLDRLITIALPRVRDFRGVSGK 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFR 178 +FDGRGNYN+GV+EQIIFPEIEYDKIDALRG+NI+ITTTAKTD+EAKALL+ FKFPF+ Sbjct: 121 SFDGRGNYNMGVREQIIFPEIEYDKIDALRGLNITITTTAKTDEEAKALLSLFKFPFK 178 >VC2584 [J] COG0094 Ribosomal protein L5 Vch Vibrio cholerae Length = 179 Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 123/178 (69%), Positives = 159/178 (89%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 MA+L +YK VVA+LT ++SY SVM+VPRI KITLNMG+ EA+ DKK++E+A D+ I Sbjct: 1 MAKLHDYYKSSVVAELTKQFSYTSVMQVPRIEKITLNMGVGEAINDKKLLENAASDMAII 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 +GQKP++TKARK++AGFKIREGYPIGC VTLRG RM++FL+RLI++ALPRVRDFRGV+G+ Sbjct: 61 SGQKPLITKARKSVAGFKIREGYPIGCKVTLRGERMWDFLERLISIALPRVRDFRGVNGK 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFR 178 +FDGRGNY++GV+EQIIFPEI+YDK+D +RG++I+ITTTA TD+E +ALLAAF FPFR Sbjct: 121 SFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAGTDEEGRALLAAFNFPFR 178 >HI0790 [J] COG0094 Ribosomal protein L5 Hin Haemophilus influenzae Length = 179 Score = 275 bits (702), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 121/178 (67%), Positives = 159/178 (89%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 MA+L +Y+D+VV++L K+ YKSVM+VPRI KITLNMG+ EA+ DKK++++AV DL I Sbjct: 1 MAKLHDYYRDQVVSELKNKFGYKSVMQVPRIEKITLNMGVGEALTDKKLLDNAVADLAAI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 +GQKP+VTKARK++AGFKIR+GYPIGC VTLRG RM+EF +RLIT+A+PR+RDFRG+S + Sbjct: 61 SGQKPLVTKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAK 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFR 178 +FDGRGNY++GV+EQIIFPEI+YDK+D +RG++I+ITTTAK D+E +ALLAAF FPFR Sbjct: 121 SFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKNDEEGQALLAAFNFPFR 178 >STM3428 [J] COG0094 Ribosomal protein L5 Sty Salmonella typhimurium LT2 Length = 179 Score = 274 bits (701), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 120/178 (67%), Positives = 160/178 (89%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 MA+L +YKD+VV L T+++Y SVM+VPR+ KITLNMG+ EA+ADKK++++A DLT I Sbjct: 1 MAKLHDYYKDEVVNKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLTAI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 +GQKP++TKARK++AGFKIR+GYPIGC VTLRG RM+EF +RLIT+A+PR+RDFRG+S + Sbjct: 61 SGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAK 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFR 178 +FDGRGNY++GV+EQIIFPEI+YDK+D +RG++I+ITTTAK+D+E +ALLAAF FPFR Sbjct: 121 SFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDEEGRALLAAFDFPFR 178 >PM1403 [J] COG0094 Ribosomal protein L5 Pmu Pasteurella multocida Length = 179 Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 120/178 (67%), Positives = 160/178 (89%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 MA+L +Y+D+VV +L K++YKSVM+VPRI KITLNMG+ EA+ DKK++++AV DL I Sbjct: 1 MAKLHDYYRDQVVNELKDKFNYKSVMQVPRIEKITLNMGVGEALTDKKLLDNAVADLAAI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 +GQKP++TKARK++AGFKIR+GYPIGC VTLRG RM+EF +RLIT+A+PR+RDFRG+S + Sbjct: 61 SGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAK 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFR 178 +FDGRGNY++GV+EQIIFPEI+YDK+D +RG++I+ITTTAK+D+E +ALLAAF FPFR Sbjct: 121 SFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDEEGQALLAAFNFPFR 178 >PA4251 [J] COG0094 Ribosomal protein L5 Pae Pseudomonas aeruginosa Length = 179 Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 126/179 (70%), Positives = 154/179 (86%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 MARL++ Y+ ++ L + +VMEVPR+ KITLNMGL EAV DKKIIE+AV DL KI Sbjct: 1 MARLKEIYRKEIAPKLKEELQLANVMEVPRVTKITLNMGLGEAVGDKKIIENAVADLEKI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 GQKPVVT ARK+IAGFKIREG+PIG VTLR RMYEFLDRL++++LPRVRDFRG++ + Sbjct: 61 TGQKPVVTYARKSIAGFKIREGWPIGVKVTLRSDRMYEFLDRLLSISLPRVRDFRGLNAK 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 +FDGRGNY++GVKEQIIFPEI+YDKIDALRG++I++TTTA+TDDE +ALL AFKFPFRN Sbjct: 121 SFDGRGNYSMGVKEQIIFPEIDYDKIDALRGLDITLTTTARTDDEGRALLRAFKFPFRN 179 >YPO0222 [J] COG0094 Ribosomal protein L5 Ype Yersinia pestis Length = 179 Score = 261 bits (668), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 120/179 (67%), Positives = 158/179 (88%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 MA+L +YKD+VV L +++ Y SVM+VPR+ KITLNMG+ EA+ADKK++++A DL I Sbjct: 1 MAKLHDYYKDEVVKQLMSQFGYDSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLAAI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 +GQKP +TKARK++AGFKIR+GYPIGC VTLRG RM+EF +RLIT+A+PR+RDFRG+S + Sbjct: 61 SGQKPFITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAK 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 +FDGRGNY++GV+EQIIFPEI+YDK+D +RG++I+ITTTAK+DDE +ALLAAFKFPFR Sbjct: 121 SFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDDEGRALLAAFKFPFRK 179 >rplE [J] COG0094 Ribosomal protein L5 Eco Escherichia coli K12 Length = 179 Score = 260 bits (664), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 119/178 (66%), Positives = 159/178 (89%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 MA+L +YKD+VV L T+++Y SVM+VPR+ KITLNMG+ EA+ADKK++++A DL I Sbjct: 1 MAKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLAAI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 +GQKP++TKARK++AGFKIR+GYPIGC VTLRG RM+EF +RLIT+A+PR+RDFRG+S + Sbjct: 61 SGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAK 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFR 178 +FDGRGNY++GV+EQIIFPEI+YDK+D +RG++I+ITTTAK+D+E +ALLAAF FPFR Sbjct: 121 SFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDEEGRALLAAFDFPFR 178