BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0334.p (62 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3001 [J] COG1841 Ribosomal protein L30/L7E Rso Ralstonia sola... 96 1e-20 VC2578 [J] COG1841 Ribosomal protein L30/L7E Vch Vibrio cholerae 72 4e-13 HI0796 [J] COG1841 Ribosomal protein L30/L7E Hin Haemophilus inf... 69 2e-12 NMB0160 [J] COG1841 Ribosomal protein L30/L7E Nme Neisseria meni... 69 3e-12 NMA0111 [J] COG1841 Ribosomal protein L30/L7E NmA Neisseria meni... 69 3e-12 PM1397 [J] COG1841 Ribosomal protein L30/L7E Pmu Pasteurella mul... 69 4e-12 YPO0227 [J] COG1841 Ribosomal protein L30/L7E Ype Yersinia pestis 66 2e-11 PA4245 [J] COG1841 Ribosomal protein L30/L7E Pae Pseudomonas aer... 66 2e-11 rpmD [J] COG1841 Ribosomal protein L30/L7E Eco Escherichia coli K12 66 2e-11 ZrpmD [J] COG1841 Ribosomal protein L30/L7E EcZ Escherichia coli... 66 2e-11 >RSc3001 [J] COG1841 Ribosomal protein L30/L7E Rso Ralstonia solanacearum Length = 60 Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 45/54 (83%), Positives = 53/54 (98%) Query: 8 IKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVV 61 +KV+LV+ LIGTR+DHRATVRGLGLRR+NSVSEL+DTP+VRGMINKVSYLVKV+ Sbjct: 6 VKVQLVRSLIGTREDHRATVRGLGLRRLNSVSELQDTPAVRGMINKVSYLVKVI 59 >VC2578 [J] COG1841 Ribosomal protein L30/L7E Vch Vibrio cholerae Length = 58 Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 35/54 (64%), Positives = 40/54 (74%) Query: 7 TIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKV 60 TIKV K IG H+AT+RGLGLR++N ELEDTP VRGMINKV Y+VKV Sbjct: 3 TIKVTQTKSSIGRLPKHKATLRGLGLRKINHTVELEDTPCVRGMINKVYYMVKV 56 >HI0796 [J] COG1841 Ribosomal protein L30/L7E Hin Haemophilus influenzae Length = 59 Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/57 (59%), Positives = 42/57 (73%) Query: 4 MANTIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKV 60 MA TIKV V+ I H+AT+RGLGLR ++ EL DTP+VRGMIN+VSY+VKV Sbjct: 1 MAKTIKVTQVRSSIARLPKHKATLRGLGLRHIHHTVELIDTPAVRGMINQVSYMVKV 57 >NMB0160 [J] COG1841 Ribosomal protein L30/L7E Nme Neisseria meningitidis MC58 Length = 61 Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 35/55 (63%), Positives = 40/55 (72%) Query: 8 IKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVVS 62 I+V LVK LIGT + HRA RGLGLRR E+ DTP RGMINK+SYL+KV S Sbjct: 7 IRVTLVKSLIGTIESHRACARGLGLRRREHTVEVLDTPENRGMINKISYLLKVES 61 >NMA0111 [J] COG1841 Ribosomal protein L30/L7E NmA Neisseria meningitidis Z2491 Length = 61 Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 35/55 (63%), Positives = 40/55 (72%) Query: 8 IKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVVS 62 I+V LVK LIGT + HRA RGLGLRR E+ DTP RGMINK+SYL+KV S Sbjct: 7 IRVTLVKSLIGTIESHRACARGLGLRRREHTVEVLDTPENRGMINKISYLLKVES 61 >PM1397 [J] COG1841 Ribosomal protein L30/L7E Pmu Pasteurella multocida Length = 59 Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 34/57 (59%), Positives = 42/57 (73%) Query: 4 MANTIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKV 60 MA TIKV V+ I H+AT+RGLGLR ++ EL DTP+VRGMIN+VSY+VKV Sbjct: 1 MAKTIKVTQVRSSIARLPKHKATLRGLGLRHMHHTVELIDTPAVRGMINQVSYMVKV 57 >YPO0227 [J] COG1841 Ribosomal protein L30/L7E Ype Yersinia pestis Length = 59 Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 34/57 (59%), Positives = 40/57 (70%) Query: 4 MANTIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKV 60 MA TIKV K IG H+AT+ GLGLRR+ E EDTP+VRGM+N VSY+VKV Sbjct: 1 MAKTIKVTQTKSSIGRLPKHKATLIGLGLRRIGHTVEREDTPAVRGMVNLVSYMVKV 57 >PA4245 [J] COG1841 Ribosomal protein L30/L7E Pae Pseudomonas aeruginosa Length = 58 Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 31/54 (57%), Positives = 40/54 (74%) Query: 7 TIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKV 60 T+KV LVK L G +H+A V+GLGLRR+N E++DTP RGMINK YL++V Sbjct: 3 TVKVTLVKSLNGRLANHKACVKGLGLRRINHTVEVQDTPENRGMINKAYYLLRV 56 >rpmD [J] COG1841 Ribosomal protein L30/L7E Eco Escherichia coli K12 Length = 59 Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 31/57 (54%), Positives = 40/57 (70%) Query: 4 MANTIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKV 60 MA TIK+ + IG H+AT+ GLGLRR+ E EDTP++RGMIN VS++VKV Sbjct: 1 MAKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAIRGMINAVSFMVKV 57 >ZrpmD [J] COG1841 Ribosomal protein L30/L7E EcZ Escherichia coli O157:H7 EDL933 Length = 59 Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 31/57 (54%), Positives = 40/57 (70%) Query: 4 MANTIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKV 60 MA TIK+ + IG H+AT+ GLGLRR+ E EDTP++RGMIN VS++VKV Sbjct: 1 MAKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAIRGMINAVSFMVKV 57