BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0333.p (144 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value NMB0161 [J] COG0200 Ribosomal protein L15 Nme Neisseria meningit... 199 1e-51 NMA0110 [J] COG0200 Ribosomal protein L15 NmA Neisseria meningit... 198 3e-51 RSc3000 [J] COG0200 Ribosomal protein L15 Rso Ralstonia solanace... 194 4e-50 VC2577 [J] COG0200 Ribosomal protein L15 Vch Vibrio cholerae 164 6e-41 PM1396 [J] COG0200 Ribosomal protein L15 Pmu Pasteurella multocida 164 6e-41 HI0797 [J] COG0200 Ribosomal protein L15 Hin Haemophilus influenzae 163 1e-40 YPO0228 [J] COG0200 Ribosomal protein L15 Ype Yersinia pestis 161 4e-40 ZrplO [J] COG0200 Ribosomal protein L15 EcZ Escherichia coli O15... 160 7e-40 STM3421 [J] COG0200 Ribosomal protein L15 Sty Salmonella typhimu... 160 7e-40 ECs4166 [J] COG0200 Ribosomal protein L15 Ecs Escherichia coli O... 160 7e-40 >NMB0161 [J] COG0200 Ribosomal protein L15 Nme Neisseria meningitidis MC58 Length = 144 Score = 199 bits (507), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 100/142 (70%), Positives = 115/142 (80%) Query: 1 MQLNTIQPAEGAKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60 M LNTIQPA GA HA RRVGRGIGSGLGKT GRGHKGQKSRSGGFHKVGFEGGQMPLQRR Sbjct: 1 MFLNTIQPAVGATHAGRRVGRGIGSGLGKTGGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60 Query: 61 LPKRGFKSLATPYKAEVRLSDLEKLPVAEIDVLALKQAGLVSELARVVRIIKAGELTKKV 120 LPKRGFKSL A++RLS+LE + V EID+L LKQAGL++ V++I +GE++K V Sbjct: 61 LPKRGFKSLTASANAQLRLSELESIAVNEIDILVLKQAGLIASTVSNVKVIASGEISKAV 120 Query: 121 TVKGLIATAGAKAAIEAAGGSI 142 +KG+ T GA+AAIEA GG I Sbjct: 121 ALKGIKVTKGARAAIEAVGGKI 142 >NMA0110 [J] COG0200 Ribosomal protein L15 NmA Neisseria meningitidis Z2491 Length = 144 Score = 198 bits (503), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 100/142 (70%), Positives = 114/142 (80%) Query: 1 MQLNTIQPAEGAKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60 M LNTIQPA GA HA RRVGRGIGSGLGKT GRGHKGQKSRSGGFHKVGFEGGQMPLQRR Sbjct: 1 MFLNTIQPAVGATHAGRRVGRGIGSGLGKTGGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60 Query: 61 LPKRGFKSLATPYKAEVRLSDLEKLPVAEIDVLALKQAGLVSELARVVRIIKAGELTKKV 120 LPKRGFKSL A++RLS+LE + V EID+L LKQAGL++ V++I GE++K V Sbjct: 61 LPKRGFKSLTASANAQLRLSELESIAVNEIDILVLKQAGLIASTVSNVKVIAFGEISKAV 120 Query: 121 TVKGLIATAGAKAAIEAAGGSI 142 +KG+ T GA+AAIEA GG I Sbjct: 121 ALKGIKVTKGARAAIEAVGGKI 142 >RSc3000 [J] COG0200 Ribosomal protein L15 Rso Ralstonia solanacearum Length = 143 Score = 194 bits (494), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 97/128 (75%), Positives = 108/128 (84%) Query: 1 MQLNTIQPAEGAKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60 MQLN ++PA G+KHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPL RR Sbjct: 1 MQLNNLKPAAGSKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLHRR 60 Query: 61 LPKRGFKSLATPYKAEVRLSDLEKLPVAEIDVLALKQAGLVSELARVVRIIKAGELTKKV 120 LPKRGF SL + AEVRL DL LPVAEID+L LKQAGLV EL + ++I +G + KKV Sbjct: 61 LPKRGFTSLTKEFTAEVRLGDLAGLPVAEIDLLTLKQAGLVGELVKSAKVILSGSIDKKV 120 Query: 121 TVKGLIAT 128 T+KGL AT Sbjct: 121 TLKGLGAT 128 >VC2577 [J] COG0200 Ribosomal protein L15 Vch Vibrio cholerae Length = 144 Score = 164 bits (415), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 89/144 (61%), Positives = 108/144 (75%) Query: 1 MQLNTIQPAEGAKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60 M LNT+ PA G+KHA +R+GRG+GSGLGKT GRGHKGQKSRSGG + GFEGGQMPL++R Sbjct: 1 MLLNTLSPAAGSKHAPKRLGRGVGSGLGKTGGRGHKGQKSRSGGKVRPGFEGGQMPLKQR 60 Query: 61 LPKRGFKSLATPYKAEVRLSDLEKLPVAEIDVLALKQAGLVSELARVVRIIKAGELTKKV 120 LPK GF S + AEVRLS+L K+ +D+ ALK A LV++ +I+ +GE+ K V Sbjct: 61 LPKFGFTSRKSFVSAEVRLSELAKVTGDVVDLNALKAANLVTKNIEFAKIVLSGEINKAV 120 Query: 121 TVKGLIATAGAKAAIEAAGGSIAE 144 TVKGL T GAKAAIEAAGG I E Sbjct: 121 TVKGLRVTKGAKAAIEAAGGKIEE 144 >PM1396 [J] COG0200 Ribosomal protein L15 Pmu Pasteurella multocida Length = 144 Score = 164 bits (415), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 87/144 (60%), Positives = 109/144 (75%) Query: 1 MQLNTIQPAEGAKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60 M+LNT+ PAEGAKH+ +R+GRGIGSGLGKT GRGHKGQKSR+GG + GFEGGQMPL RR Sbjct: 1 MRLNTLSPAEGAKHSAKRLGRGIGSGLGKTGGRGHKGQKSRTGGGVRRGFEGGQMPLYRR 60 Query: 61 LPKRGFKSLATPYKAEVRLSDLEKLPVAEIDVLALKQAGLVSELARVVRIIKAGELTKKV 120 LPK GF S+ AEVRL+DL K+ + + +LK A ++++ + V+II AGE+ V Sbjct: 61 LPKFGFTSMKAAVTAEVRLNDLAKVEGGVVTLESLKAANVITKDIQFVKIILAGEVKGAV 120 Query: 121 TVKGLIATAGAKAAIEAAGGSIAE 144 V+GL T GAKAAIEAAGGS+ E Sbjct: 121 VVRGLRVTKGAKAAIEAAGGSVEE 144 >HI0797 [J] COG0200 Ribosomal protein L15 Hin Haemophilus influenzae Length = 144 Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 86/144 (59%), Positives = 109/144 (75%) Query: 1 MQLNTIQPAEGAKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60 M+LNT+ PAEGAKH+ +R+GRGIGSGLGKT GRGHKGQKSR+GG + GFEGGQMPL RR Sbjct: 1 MRLNTLSPAEGAKHSAKRLGRGIGSGLGKTGGRGHKGQKSRTGGGVRRGFEGGQMPLYRR 60 Query: 61 LPKRGFKSLATPYKAEVRLSDLEKLPVAEIDVLALKQAGLVSELARVVRIIKAGELTKKV 120 LPK GF S+ + AEVRL++L K+ + + LK A ++++ + ++I AGE+ V Sbjct: 61 LPKFGFTSMKSAVTAEVRLNELTKVEGNVVTLETLKAANILTKDIQFAKVILAGEVKSAV 120 Query: 121 TVKGLIATAGAKAAIEAAGGSIAE 144 TV+GL T GAKAAIEAAGGSI E Sbjct: 121 TVRGLRVTKGAKAAIEAAGGSIEE 144 >YPO0228 [J] COG0200 Ribosomal protein L15 Ype Yersinia pestis Length = 144 Score = 161 bits (408), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 89/144 (61%), Positives = 105/144 (72%) Query: 1 MQLNTIQPAEGAKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60 M+LNT+ PAEGAKHA +RVGRGIGSGLGKTAGRGHKGQ SRSGG + GFEGGQMPL RR Sbjct: 1 MRLNTLSPAEGAKHAPKRVGRGIGSGLGKTAGRGHKGQNSRSGGGVRRGFEGGQMPLYRR 60 Query: 61 LPKRGFKSLATPYKAEVRLSDLEKLPVAEIDVLALKQAGLVSELARVVRIIKAGELTKKV 120 LPK GF S AEVRLS+L + ID+ LK A +V V++I +GE+ + V Sbjct: 61 LPKFGFTSRKAMITAEVRLSELALVEGDVIDLNTLKAANVVGIQMEFVKVILSGEVNRAV 120 Query: 121 TVKGLIATAGAKAAIEAAGGSIAE 144 T++GL T GA+AAIEAAGG I E Sbjct: 121 TLRGLRVTKGARAAIEAAGGKIEE 144 >ZrplO [J] COG0200 Ribosomal protein L15 EcZ Escherichia coli O157:H7 EDL933 Length = 144 Score = 160 bits (406), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 88/144 (61%), Positives = 104/144 (72%) Query: 1 MQLNTIQPAEGAKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60 M+LNT+ PAEG+K A +R+GRGIGSGLGKT GRGHKGQKSRSGG + GFEGGQMPL RR Sbjct: 1 MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRR 60 Query: 61 LPKRGFKSLATPYKAEVRLSDLEKLPVAEIDVLALKQAGLVSELARVVRIIKAGELTKKV 120 LPK GF S AEVRLSDL K+ +D+ LK A ++ ++I AGE+T V Sbjct: 61 LPKFGFTSRKAAITAEVRLSDLAKVEGGVVDLNTLKAANIIGIQIEFAKVILAGEVTTPV 120 Query: 121 TVKGLIATAGAKAAIEAAGGSIAE 144 TV+GL T GA+AAIEAAGG I E Sbjct: 121 TVRGLRVTKGARAAIEAAGGKIEE 144 >STM3421 [J] COG0200 Ribosomal protein L15 Sty Salmonella typhimurium LT2 Length = 144 Score = 160 bits (406), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 88/144 (61%), Positives = 104/144 (72%) Query: 1 MQLNTIQPAEGAKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60 M+LNT+ PAEG+K A +R+GRGIGSGLGKT GRGHKGQKSRSGG + GFEGGQMPL RR Sbjct: 1 MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRR 60 Query: 61 LPKRGFKSLATPYKAEVRLSDLEKLPVAEIDVLALKQAGLVSELARVVRIIKAGELTKKV 120 LPK GF S AEVRLSDL K+ +D+ LK A ++ ++I AGE+T V Sbjct: 61 LPKFGFTSRKAAITAEVRLSDLAKVEGGVVDLNTLKAANIIGIQIEFAKVILAGEVTTPV 120 Query: 121 TVKGLIATAGAKAAIEAAGGSIAE 144 TV+GL T GA+AAIEAAGG I E Sbjct: 121 TVRGLRVTKGARAAIEAAGGKIEE 144 >ECs4166 [J] COG0200 Ribosomal protein L15 Ecs Escherichia coli O157:H7 Length = 144 Score = 160 bits (406), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 88/144 (61%), Positives = 104/144 (72%) Query: 1 MQLNTIQPAEGAKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60 M+LNT+ PAEG+K A +R+GRGIGSGLGKT GRGHKGQKSRSGG + GFEGGQMPL RR Sbjct: 1 MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRR 60 Query: 61 LPKRGFKSLATPYKAEVRLSDLEKLPVAEIDVLALKQAGLVSELARVVRIIKAGELTKKV 120 LPK GF S AEVRLSDL K+ +D+ LK A ++ ++I AGE+T V Sbjct: 61 LPKFGFTSRKAAITAEVRLSDLAKVEGGVVDLNTLKAANIIGIQIEFAKVILAGEVTTPV 120 Query: 121 TVKGLIATAGAKAAIEAAGGSIAE 144 TV+GL T GA+AAIEAAGG I E Sbjct: 121 TVRGLRVTKGARAAIEAAGGKIEE 144