BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0326.p (112 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value STM3414 [J] COG0203 Ribosomal protein L17 Sty Salmonella typhimu... 166 9e-42 rplQ [J] COG0203 Ribosomal protein L17 Eco Escherichia coli K12 164 4e-41 ZrplQ [J] COG0203 Ribosomal protein L17 EcZ Escherichia coli O15... 164 4e-41 ECs4159 [J] COG0203 Ribosomal protein L17 Ecs Escherichia coli O... 164 4e-41 RSc2992 [J] COG0203 Ribosomal protein L17 Rso Ralstonia solanace... 162 2e-40 VC2570 [J] COG0203 Ribosomal protein L17 Vch Vibrio cholerae 159 1e-39 YPO0235 [J] COG0203 Ribosomal protein L17 Ype Yersinia pestis 159 1e-39 HI0803 [J] COG0203 Ribosomal protein L17 Hin Haemophilus influenzae 157 8e-39 NMB0169 [J] COG0203 Ribosomal protein L17 Nme Neisseria meningit... 155 1e-38 PA4237 [J] COG0203 Ribosomal protein L17 Pae Pseudomonas aeruginosa 154 4e-38 >STM3414 [J] COG0203 Ribosomal protein L17 Sty Salmonella typhimurium LT2 Length = 127 Score = 166 bits (421), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 79/106 (74%), Positives = 91/106 (85%) Query: 1 MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFNRLRDREIVGKL 60 M RNM SL+RHE IKTTLPKAKELRRVVEP++TL KTD++AN+RLAF R RD EIV KL Sbjct: 20 MFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKL 79 Query: 61 FSELGPRYAARNGGYLRILKMGFRQGDNAPMAFVELVDRPEVTDAA 106 F+ELGPR+A+R GGY RILK GFR GDNAPMA++ELVDR E T+AA Sbjct: 80 FNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEKTEAA 125 >rplQ [J] COG0203 Ribosomal protein L17 Eco Escherichia coli K12 Length = 127 Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 78/106 (73%), Positives = 90/106 (84%) Query: 1 MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFNRLRDREIVGKL 60 M RNM SL+RHE IKTTLPKAKELRRVVEP++TL KTD++AN+RLAF R RD EIV KL Sbjct: 20 MFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKL 79 Query: 61 FSELGPRYAARNGGYLRILKMGFRQGDNAPMAFVELVDRPEVTDAA 106 F+ELGPR+A+R GGY RILK GFR GDNAPMA++ELVDR E +AA Sbjct: 80 FNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEKAEAA 125 >ZrplQ [J] COG0203 Ribosomal protein L17 EcZ Escherichia coli O157:H7 EDL933 Length = 127 Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 78/106 (73%), Positives = 90/106 (84%) Query: 1 MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFNRLRDREIVGKL 60 M RNM SL+RHE IKTTLPKAKELRRVVEP++TL KTD++AN+RLAF R RD EIV KL Sbjct: 20 MFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKL 79 Query: 61 FSELGPRYAARNGGYLRILKMGFRQGDNAPMAFVELVDRPEVTDAA 106 F+ELGPR+A+R GGY RILK GFR GDNAPMA++ELVDR E +AA Sbjct: 80 FNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEKAEAA 125 >ECs4159 [J] COG0203 Ribosomal protein L17 Ecs Escherichia coli O157:H7 Length = 127 Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 78/106 (73%), Positives = 90/106 (84%) Query: 1 MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFNRLRDREIVGKL 60 M RNM SL+RHE IKTTLPKAKELRRVVEP++TL KTD++AN+RLAF R RD EIV KL Sbjct: 20 MFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKL 79 Query: 61 FSELGPRYAARNGGYLRILKMGFRQGDNAPMAFVELVDRPEVTDAA 106 F+ELGPR+A+R GGY RILK GFR GDNAPMA++ELVDR E +AA Sbjct: 80 FNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEKAEAA 125 >RSc2992 [J] COG0203 Ribosomal protein L17 Rso Ralstonia solanacearum Length = 132 Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 78/100 (78%), Positives = 88/100 (88%) Query: 1 MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFNRLRDREIVGKL 60 MLRNM+ SL +HE IKTTLPKAKELR+VVEP++TL K DT+AN+RLAF RLRDR++V KL Sbjct: 20 MLRNMSNSLFQHELIKTTLPKAKELRKVVEPLITLAKKDTVANRRLAFARLRDRDMVTKL 79 Query: 61 FSELGPRYAARNGGYLRILKMGFRQGDNAPMAFVELVDRP 100 F+ELGPRYA R GGY RILK GFRQGDNAPMA VELVDRP Sbjct: 80 FTELGPRYATRPGGYTRILKFGFRQGDNAPMALVELVDRP 119 >VC2570 [J] COG0203 Ribosomal protein L17 Vch Vibrio cholerae Length = 128 Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 74/100 (74%), Positives = 85/100 (85%) Query: 1 MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFNRLRDREIVGKL 60 M NM SL+RHE IKTTLPKAKELRRVVEP++TL KTD++AN+RLAF R RD E+V KL Sbjct: 20 MFSNMASSLVRHEVIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEVVAKL 79 Query: 61 FSELGPRYAARNGGYLRILKMGFRQGDNAPMAFVELVDRP 100 F+ELGPR+AAR GGY RILK GFR GD APMA++ELVDRP Sbjct: 80 FNELGPRFAARQGGYTRILKCGFRAGDKAPMAYIELVDRP 119 >YPO0235 [J] COG0203 Ribosomal protein L17 Ype Yersinia pestis Length = 129 Score = 159 bits (402), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 75/99 (75%), Positives = 85/99 (85%) Query: 1 MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFNRLRDREIVGKL 60 M RNM SL+RHE IKTTLPKAKELRRVVEP++TL KTD +AN+RLAF R RD EIV KL Sbjct: 20 MFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDNVANRRLAFARTRDNEIVAKL 79 Query: 61 FSELGPRYAARNGGYLRILKMGFRQGDNAPMAFVELVDR 99 F+ELGPR+A+R GGY RILK GFR GDNAPMA++ELVDR Sbjct: 80 FNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDR 118 >HI0803 [J] COG0203 Ribosomal protein L17 Hin Haemophilus influenzae Length = 128 Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 73/105 (69%), Positives = 87/105 (82%) Query: 1 MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFNRLRDREIVGKL 60 M RN+ +L+ HE IKTTLPKAKELRRVVEP++TL K D++AN+RLAF R R+ E V KL Sbjct: 20 MFRNLASALVSHEIIKTTLPKAKELRRVVEPLITLAKVDSVANRRLAFARTRNVETVAKL 79 Query: 61 FSELGPRYAARNGGYLRILKMGFRQGDNAPMAFVELVDRPEVTDA 105 F+ELGPR+A R GGY RILK GFR GDNAPMA++ELVDRPEV +A Sbjct: 80 FNELGPRFAQRAGGYTRILKCGFRAGDNAPMAYIELVDRPEVAEA 124 >NMB0169 [J] COG0203 Ribosomal protein L17 Nme Neisseria meningitidis MC58 Length = 122 Score = 155 bits (393), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 74/100 (74%), Positives = 88/100 (88%) Query: 1 MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFNRLRDREIVGKL 60 MLRNM SLL HEAI TTLPKAKELRRVVEP++TLGK +LAN+RLAF+R RDR++V KL Sbjct: 20 MLRNMANSLLTHEAIVTTLPKAKELRRVVEPLITLGKKPSLANRRLAFDRTRDRDVVVKL 79 Query: 61 FSELGPRYAARNGGYLRILKMGFRQGDNAPMAFVELVDRP 100 F +LGPR+ ARNGGY+R+LK GFR+GDNAP+A VELVD+P Sbjct: 80 FGDLGPRFTARNGGYVRVLKYGFRKGDNAPLALVELVDKP 119 >PA4237 [J] COG0203 Ribosomal protein L17 Pae Pseudomonas aeruginosa Length = 129 Score = 154 bits (390), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 76/110 (69%), Positives = 89/110 (80%), Gaps = 3/110 (2%) Query: 1 MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFNRLRDREIVGKL 60 M +NM VSL HE IKTTLPKAKELRRV EP++TL K D++AN+RLAF+R R + VGKL Sbjct: 20 MFQNMAVSLFEHELIKTTLPKAKELRRVAEPLITLAKEDSVANRRLAFDRTRSKAAVGKL 79 Query: 61 FSELGPRYAARNGGYLRILKMGFRQGDNAPMAFVELVDRP---EVTDAAD 107 F++LG RYA R GGYLRILK GFR GDNAPMA+VELVDRP EV +AA+ Sbjct: 80 FNDLGKRYANRPGGYLRILKCGFRAGDNAPMAYVELVDRPVGGEVVEAAE 129