BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0284.p (241 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2437 [E] COG0410 ABC-type branched-chain amino acid transport... 347 1e-95 alr2541 [E] COG0410 ABC-type branched-chain amino acid transport... 256 3e-68 TM1139 [E] COG0410 ABC-type branched-chain amino acid transport ... 255 7e-68 DR2118 [E] COG0410 ABC-type branched-chain amino acid transport ... 251 1e-66 RSp0017 [E] COG0410 ABC-type branched-chain amino acid transport... 246 3e-65 FN1428 [E] COG0410 ABC-type branched-chain amino acid transport ... 245 7e-65 DR1034 [E] COG0410 ABC-type branched-chain amino acid transport ... 244 9e-65 SP0753 [E] COG0410 ABC-type branched-chain amino acid transport ... 241 1e-63 BMEII0098 [E] COG0410 ABC-type branched-chain amino acid transpo... 234 2e-61 BMEI0261 [E] COG0410 ABC-type branched-chain amino acid transpor... 226 4e-59 >RSc2437 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 244 Score = 347 bits (890), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 170/240 (70%), Positives = 202/240 (84%), Gaps = 2/240 (0%) Query: 1 MTTNILKVQQLSVAYGGIQAVKGIDLEVNEGELVTLIGANGAGKTTTLKAITGTLPASRV 60 M +LK+ L VAYGGIQAVKG+DLE+ +GELVTLIGANGAGKTTT+KAITG Sbjct: 7 MKQTVLKISGLKVAYGGIQAVKGVDLEIADGELVTLIGANGAGKTTTMKAITGL--QGWA 64 Query: 61 EGHIEYLGQALKGKKSFELVKDKLAMVPEGRGVFTRMSIQENLLMGAYTSDDKGQIAADI 120 G +EY+G+++KG S+ L+K LAMVPEGRGVF RM+I ENL MGA+T +D+ I ADI Sbjct: 65 GGDVEYMGKSIKGVPSYNLLKQGLAMVPEGRGVFARMTIVENLQMGAFTRNDESGIKADI 124 Query: 121 DKWFAVFPRLKERAAQMAGTLSGGEQQMRGMAPALMSHPKLLLLDEPSMGLSPIMVEKIF 180 D+ F +FPRLKERA Q+AGT+SGGEQQM MA ALMS PKLLLLDEPSMGLSPIMVEKIF Sbjct: 125 DRMFGIFPRLKERANQLAGTMSGGEQQMLAMARALMSQPKLLLLDEPSMGLSPIMVEKIF 184 Query: 181 EVIRNVSAQGITILLVEQNAKLALEAAHRGYVMESGLITMQGQAQQMLDDPRVKAAYLGE 240 EV+R++S QG+T+LLVEQNA+LAL+AAHRGYVM+SGLITM G A+QMLDDP+V+AAYLGE Sbjct: 185 EVVRDISGQGVTVLLVEQNARLALQAAHRGYVMDSGLITMSGDAKQMLDDPKVRAAYLGE 244 >alr2541 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Nos Nostoc sp. PCC 7120 Length = 264 Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 128/235 (54%), Positives = 173/235 (73%), Gaps = 2/235 (0%) Query: 5 ILKVQQLSVAYGGIQAVKGIDLEVNEGELVTLIGANGAGKTTTLKAITGTLPASRVEGHI 64 IL++Q+L V YGGIQA+K I+L + +GE+VTLIGANGAGK+TTL+AI+ + G I Sbjct: 32 ILEIQELDVNYGGIQALKKINLTIQKGEVVTLIGANGAGKSTTLRAISKIVTPK--NGQI 89 Query: 65 EYLGQALKGKKSFELVKDKLAMVPEGRGVFTRMSIQENLLMGAYTSDDKGQIAADIDKWF 124 Y G+ + + E+VK +A PEGR V + ++ +NLL+GAY ++ +I ADI + F Sbjct: 90 IYSGRNITRRLPHEVVKFGIAHCPEGRRVLAKQTVLDNLLLGAYIRSNQTEIKADIKQQF 149 Query: 125 AVFPRLKERAAQMAGTLSGGEQQMRGMAPALMSHPKLLLLDEPSMGLSPIMVEKIFEVIR 184 +FPRL +R Q+AGTLSGGEQQM +A ALMS P+LLLLDEPS+GL+P +V +IF +I Sbjct: 150 ELFPRLAQRQNQLAGTLSGGEQQMLAIARALMSRPQLLLLDEPSLGLAPAIVREIFSIIE 209 Query: 185 NVSAQGITILLVEQNAKLALEAAHRGYVMESGLITMQGQAQQMLDDPRVKAAYLG 239 N+ A G+TILLVEQNA LAL+ A RGYV+E+G IT+ G A +++D RVK AYLG Sbjct: 210 NLRATGVTILLVEQNANLALQIADRGYVLEAGSITLSGAASNLINDERVKKAYLG 264 >TM1139 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Tma Thermotoga maritima Length = 239 Score = 255 bits (651), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 128/239 (53%), Positives = 176/239 (73%), Gaps = 2/239 (0%) Query: 1 MTTNILKVQQLSVAYGGIQAVKGIDLEVNEGELVTLIGANGAGKTTTLKAITGTLPASRV 60 M+ +L+VQ L V YG I A+KGIDL+V G++VTLIGANGAGKTTTL AI G + A + Sbjct: 1 MSDIVLEVQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQK- 59 Query: 61 EGHIEYLGQALKGKKSFELVKDKLAMVPEGRGVFTRMSIQENLLMGAYTSDDKGQIAADI 120 G I + GQ + K + + + +A+VPEGR +F +++ ENL+MGAY DK I D+ Sbjct: 60 -GKIIFNGQDITNKPAHVINRMGIALVPEGRRIFPELTVYENLMMGAYNRKDKEGIKRDL 118 Query: 121 DKWFAVFPRLKERAAQMAGTLSGGEQQMRGMAPALMSHPKLLLLDEPSMGLSPIMVEKIF 180 + F++FPRLKER Q+ GTLSGGEQQM + ALMS PKLL++DEPS+GL+PI+V ++F Sbjct: 119 EWIFSLFPRLKERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEVF 178 Query: 181 EVIRNVSAQGITILLVEQNAKLALEAAHRGYVMESGLITMQGQAQQMLDDPRVKAAYLG 239 EVI+ ++ +G TILLVEQNA AL+ AH GYV+E+G I ++G+A ++LD+ V+ AYLG Sbjct: 179 EVIQKINQEGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLDNEMVRKAYLG 237 >DR2118 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Dra Deinococcus radiodurans Length = 236 Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 129/235 (54%), Positives = 171/235 (72%), Gaps = 2/235 (0%) Query: 5 ILKVQQLSVAYGGIQAVKGIDLEVNEGELVTLIGANGAGKTTTLKAITGTLPASRVEGHI 64 +L+++ L V YG IQAV+G+ LEV EGE+VTLIGANGAGKTTTL+A++ + V G I Sbjct: 3 LLEIENLGVNYGAIQAVRGLSLEVQEGEVVTLIGANGAGKTTTLRAVSRMVRP--VAGII 60 Query: 65 EYLGQALKGKKSFELVKDKLAMVPEGRGVFTRMSIQENLLMGAYTSDDKGQIAADIDKWF 124 + G+ + E VK +A PEGR V R SIQ+NL +GAY D+ I AD+ + + Sbjct: 61 RFGGRDITRIPPDEAVKIGIAQSPEGRQVLARQSIQDNLELGAYVRSDRAGIQADLQRMY 120 Query: 125 AVFPRLKERAAQMAGTLSGGEQQMRGMAPALMSHPKLLLLDEPSMGLSPIMVEKIFEVIR 184 FPRL ER Q+AGTLSGGEQQM +A ALMS PKLLLLDEPS+GL+P++V +IF +IR Sbjct: 121 DRFPRLGERRTQLAGTLSGGEQQMLAIARALMSRPKLLLLDEPSLGLAPLIVREIFTIIR 180 Query: 185 NVSAQGITILLVEQNAKLALEAAHRGYVMESGLITMQGQAQQMLDDPRVKAAYLG 239 ++ QG+TILLVEQNAKLA+ A+HR YV+E+G +T G + ++++D RV AYLG Sbjct: 181 ELNEQGMTILLVEQNAKLAMNASHRTYVLEAGQLTFSGVSSELVNDERVLHAYLG 235 >RSp0017 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 241 Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 122/239 (51%), Positives = 173/239 (72%), Gaps = 2/239 (0%) Query: 3 TNILKVQQLSVAYGGIQAVKGIDLEVNEGELVTLIGANGAGKTTTLKAITGTLPASR--V 60 T +L+V+ L V+YG I AVKGID +N GE+ +L+GANGAGK+TTL A++G +P S+ V Sbjct: 2 TVLLEVKGLEVSYGHIAAVKGIDFALNAGEITSLVGANGAGKSTTLLALSGLIPKSQGEV 61 Query: 61 EGHIEYLGQALKGKKSFELVKDKLAMVPEGRGVFTRMSIQENLLMGAYTSDDKGQIAADI 120 G I + G + + + V+ + V EGR T M+++ENL +GAYT D+ QIA+D+ Sbjct: 62 RGQILFEGADVTQWSAHKRVERGIVQVAEGRATLTTMTVRENLELGAYTRKDRSQIASDL 121 Query: 121 DKWFAVFPRLKERAAQMAGTLSGGEQQMRGMAPALMSHPKLLLLDEPSMGLSPIMVEKIF 180 ++ F +FPRLKER MAG LSGGEQQM + ALM+ P++LLLDEPSMGL+PI+V++IF Sbjct: 122 ERVFHLFPRLKERIDGMAGNLSGGEQQMLAIGRALMARPRVLLLDEPSMGLAPIIVQEIF 181 Query: 181 EVIRNVSAQGITILLVEQNAKLALEAAHRGYVMESGLITMQGQAQQMLDDPRVKAAYLG 239 ++R ++A+G+TI LVEQN + AL+ A RGYV+E+G I + Q++L +PRV AYLG Sbjct: 182 RILRTINAEGLTIFLVEQNVRQALKIAQRGYVLETGQIVLADSGQRLLGNPRVLEAYLG 240 >FN1428 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Fnu Fusobacterium nucleatum Length = 237 Score = 245 bits (625), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 125/237 (52%), Positives = 174/237 (73%), Gaps = 5/237 (2%) Query: 5 ILKVQQLSVAYGGIQAVKGIDLEVNEGELVTLIGANGAGKTTTLKAITGTL-PASRVEGH 63 +L+V+ L V Y IQA+KGI LE+NEGE+V++IGANGAGKTTTL+ I+G + P S G Sbjct: 3 MLEVKDLQVFYDNIQALKGISLEINEGEVVSIIGANGAGKTTTLQTISGLITPKS---GS 59 Query: 64 IEYLGQALKGKKSFELVKDKLAMVPEGRGVFTRMSIQENLLMGAYTSDDKGQIAA-DIDK 122 I + G+ L +K+ + K +A VPEGR +F+++++++NL +G +T D + D Sbjct: 60 IIFEGKNLLKEKAHNICKLGIAQVPEGRRIFSKLAVKDNLKLGQFTVKDSAEKKEEDRAN 119 Query: 123 WFAVFPRLKERAAQMAGTLSGGEQQMRGMAPALMSHPKLLLLDEPSMGLSPIMVEKIFEV 182 ++ VFPR+ ER Q+AGTLSGGEQQM M ALMS PKLL+LDEPSMGLSP+ V++IFEV Sbjct: 120 FYKVFPRMSERKNQLAGTLSGGEQQMLAMGRALMSRPKLLILDEPSMGLSPLFVKEIFEV 179 Query: 183 IRNVSAQGITILLVEQNAKLALEAAHRGYVMESGLITMQGQAQQMLDDPRVKAAYLG 239 I+ + +G TILLVEQNAK+AL + R YV+E+G I ++G+A+ +L + RVK AYLG Sbjct: 180 IKQLKEKGTTILLVEQNAKMALSISDRAYVIETGEIVLEGKAEDLLYNDRVKKAYLG 236 >DR1034 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Dra Deinococcus radiodurans Length = 252 Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 124/239 (51%), Positives = 171/239 (71%), Gaps = 3/239 (1%) Query: 3 TNILKVQQLSVAYGGIQAVKGIDLEVNEGELVTLIGANGAGKTTTLKAITGTLPASRVEG 62 T +L++Q + YG I+A+KG+++ VNEGE+V LIG NGAGKTTTL+ I+G + G Sbjct: 15 TPVLELQNVHSYYGQIEALKGLNMTVNEGEIVALIGGNGAGKTTTLRTISGMMKPK--TG 72 Query: 63 HIEYLGQALKGKKSFELVKDKLAMVPEGRGVFTRMSIQENLLMGAYTSDDKGQIAADIDK 122 + YLGQ + G S +L+ +A VPEGR +F +M+++ENL +GAYT +DK I A I++ Sbjct: 73 SVTYLGQNVTGVPSHQLIGRGMAHVPEGRRIFPQMTVRENLEVGAYTVNDKAAINARIEE 132 Query: 123 WFAVFPRLKERAAQMAGTLSGGEQQMRGMAPALMSHPKLLLLDEPSMGLSPIMVEKIFEV 182 F +FPRL+ER +Q+ GT+SGGEQQM +A ALM PK+LLLDEPSMGLSP+ VE IF + Sbjct: 133 GFELFPRLRERESQLGGTMSGGEQQMLAIARALMIAPKVLLLDEPSMGLSPLFVENIFSI 192 Query: 183 IRNVSAQ-GITILLVEQNAKLALEAAHRGYVMESGLITMQGQAQQMLDDPRVKAAYLGE 240 I ++ + G TILLVEQNA +AL A R YV+++G I + G AQ + D V+ AYLG+ Sbjct: 193 IERLNKERGTTILLVEQNASMALAIADRAYVLQTGEIKLSGNAQDIARDETVRKAYLGD 251 >SP0753 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Spn Streptococcus pneumoniae TIGR4 Length = 236 Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 122/237 (51%), Positives = 171/237 (72%), Gaps = 4/237 (1%) Query: 4 NILKVQQLSVAYGGIQAVKGIDLEVNEGELVTLIGANGAGKTTTLKAITGTL-PASRVEG 62 ++LKV+ LSV YG IQAV+ + EVNEGE+V+LIGANGAGKTT L+ ++G + P+S G Sbjct: 2 SMLKVENLSVHYGMIQAVRDVSFEVNEGEVVSLIGANGAGKTTILRTLSGLVRPSS---G 58 Query: 63 HIEYLGQALKGKKSFELVKDKLAMVPEGRGVFTRMSIQENLLMGAYTSDDKGQIAADIDK 122 IE+LGQ ++ + ++V L+ VPEGR VF +++ ENL MGA+ ++ + A++ K Sbjct: 59 KIEFLGQEIQKMPAQKIVASGLSQVPEGRHVFPGLTVMENLEMGAFLKKNREENQANLKK 118 Query: 123 WFAVFPRLKERAAQMAGTLSGGEQQMRGMAPALMSHPKLLLLDEPSMGLSPIMVEKIFEV 182 F+ FPRL+ER Q A TLSGGEQQM M ALMS PKLLLLDEPSMGL+PI +++IF++ Sbjct: 119 VFSRFPRLEERKNQDAATLSGGEQQMLAMGRALMSTPKLLLLDEPSMGLAPIFIQEIFDI 178 Query: 183 IRNVSAQGITILLVEQNAKLALEAAHRGYVMESGLITMQGQAQQMLDDPRVKAAYLG 239 I+++ QG T+LL+EQNA AL + RGYV+E+G I + G +++ V+ AYLG Sbjct: 179 IQDIQKQGTTVLLIEQNANKALAISDRGYVLETGRIVLSGTGKELASSEEVRKAYLG 235 >BMEII0098 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 242 Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 112/236 (47%), Positives = 170/236 (72%), Gaps = 4/236 (1%) Query: 5 ILKVQQLSVAYGGIQAVKGIDLEVNEGELVTLIGANGAGKTTTLKAITGTLPASRVEGHI 64 IL V+ LS YG + ++ ++L V E E+V L+G+NGAGKTT L+A++ + + EG I Sbjct: 9 ILDVRNLSAGYGELPVIRDLNLHVKEAEIVALVGSNGAGKTTFLRALSHLIHS---EGQI 65 Query: 65 EYLGQALKGKKSFELVKDKLAMVPEGRGVFTRMSIQENLLMGAYTSDDKGQIAADIDKWF 124 E+ G+ + S + + L +PEGR +F RMS++ENLLMGAY S DK + AD++K + Sbjct: 66 EFCGEDVSRSTSDYVFRRGLVHIPEGRQLFDRMSVEENLLMGAYRSKDKARTKADLEKVY 125 Query: 125 AVFPRLKERAAQMAGTLSGGEQQMRGMAPALMSHPKLLLLDEPSMGLSPIMVEKIFEVIR 184 +FPRL ER Q+AG++SGGEQQM MA ALM++P LLL+DE S+GL+P++V+++ ++ Sbjct: 126 VLFPRLAERRKQLAGSMSGGEQQMCAMARALMANPVLLLVDEMSLGLAPVVVDQLMTILH 185 Query: 185 NV-SAQGITILLVEQNAKLALEAAHRGYVMESGLITMQGQAQQMLDDPRVKAAYLG 239 ++ ++ +T+LLVEQ+ LAL+ A RGYVME+G T++G+AQ ++ D RV+ AYLG Sbjct: 186 DIRKSEQVTVLLVEQDIHLALDGADRGYVMETGTFTLEGKAQDLIHDERVQKAYLG 241 >BMEI0261 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 249 Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 121/235 (51%), Positives = 165/235 (70%), Gaps = 4/235 (1%) Query: 5 ILKVQQLSVAYGGIQAVKGIDLEVNEGELVTLIGANGAGKTTTLKAITGTLPASRVEGHI 64 +L V+++ YG I A+KGID+ V+EGE+V LIGANGAGK+T + I G+ P +R G I Sbjct: 13 LLSVEKVETYYGNICALKGIDMTVDEGEIVALIGANGAGKSTLMMTIFGS-PRART-GRI 70 Query: 65 EYLGQALKGKKSFELVKDKLAMVPEGRGVFTRMSIQENLLMGAYTSDDKGQIAADIDKWF 124 + G+ + E+ K ++A PEGR +F RM++ ENL MGA + D++ D+ F Sbjct: 71 LFNGKDITSMPPHEIAKLRIAQSPEGRRIFPRMTVLENLQMGA-SLDNQQYFDEDVKLMF 129 Query: 125 AVFPRLKERAAQMAGTLSGGEQQMRGMAPALMSHPKLLLLDEPSMGLSPIMVEKIFEVIR 184 +FPRLKER Q GTLSGGEQQM +A ALM PKLLLLDEPS+GL+P++V++IFE I+ Sbjct: 130 DLFPRLKERINQRGGTLSGGEQQMLAIARALMVRPKLLLLDEPSLGLAPLIVKQIFEAIK 189 Query: 185 NVS-AQGITILLVEQNAKLALEAAHRGYVMESGLITMQGQAQQMLDDPRVKAAYL 238 ++ QG+T+ LVEQNA AL+ A RGYVM +G ITM G +++L DP V+AAYL Sbjct: 190 ELNRTQGLTVFLVEQNAFGALKLADRGYVMVNGSITMSGSGRELLSDPEVRAAYL 244