BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0282.p (178 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0043 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptid... 276 2e-74 YPO0106 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptid... 246 2e-65 HI0496 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptida... 245 4e-65 PM1749 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptida... 243 1e-64 hslV [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase... 240 1e-63 ZhslV [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidas... 240 1e-63 ECs4859 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptid... 240 1e-63 VC2675 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptida... 239 2e-63 STM4092 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptid... 238 4e-63 BU578 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidas... 228 5e-60 >RSc0043 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit Rso Ralstonia solanacearum Length = 178 Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 141/178 (79%), Positives = 163/178 (91%) Query: 1 MEQFHGTTILSVRRGNQVALGGDGQVTLGNIVMKGSARKVRKLYHGKVLVGFAGGTADAF 60 MEQ+HGTTI+SVRRGNQVALGGDGQVTLGNIVMKG+ARKVR +Y GKVLVGFAG TADAF Sbjct: 1 MEQYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRTIYDGKVLVGFAGATADAF 60 Query: 61 TLLELFEAKLEKHQGNLMRASVELAKDWRTDRMLRRLEAMLLCADKETTLVITGNGDVLE 120 +LL+ FEAKL+K+QG+L+RA+V+LAKDWRTDR LR LEAML+ AD+E+TLVITGNGDVL+ Sbjct: 61 SLLDRFEAKLQKYQGHLLRAAVDLAKDWRTDRALRHLEAMLIVADRESTLVITGNGDVLD 120 Query: 121 PNDGIGAIGSGGSYAQSAAKALYENTELSPAEIVKKSLTIAGELCIYTNLNHIIETLE 178 P GI AIGSGG+YAQSAAKAL ENTEL+P ++V+KSL IAGELCIYTN N +IETLE Sbjct: 121 PEGGIAAIGSGGAYAQSAAKALMENTELAPRDVVEKSLRIAGELCIYTNTNFVIETLE 178 >YPO0106 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit Ype Yersinia pestis Length = 174 Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 119/171 (69%), Positives = 143/171 (83%) Query: 7 TTILSVRRGNQVALGGDGQVTLGNIVMKGSARKVRKLYHGKVLVGFAGGTADAFTLLELF 66 TTI+SVRR V +GGDGQVTLGN VMKG+A+KVR+LY+ KV+ GFAGGTADAFTL ELF Sbjct: 2 TTIVSVRRDGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFELF 61 Query: 67 EAKLEKHQGNLMRASVELAKDWRTDRMLRRLEAMLLCADKETTLVITGNGDVLEPNDGIG 126 E KLE HQG+L +A+VELAKDWRTDRMLR+LEA+L AD+ +L+ITGNGDV++P D + Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121 Query: 127 AIGSGGSYAQSAAKALYENTELSPAEIVKKSLTIAGELCIYTNLNHIIETL 177 AIGSGG YAQSAA+AL ENTEL +IV+KSL+IAG++CIYTN IE L Sbjct: 122 AIGSGGPYAQSAARALLENTELGARDIVEKSLSIAGDICIYTNRFQTIEEL 172 >HI0496 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit Hin Haemophilus influenzae Length = 175 Score = 245 bits (625), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 121/172 (70%), Positives = 147/172 (85%), Gaps = 1/172 (0%) Query: 7 TTILSVRRGNQVALGGDGQVTLGNIVMKGSARKVRKLYHGKVLVGFAGGTADAFTLLELF 66 TTI+SVRR QV +GGDGQV+LGN VMKG+ARKVR+LY+GKVL GFAGGTADAFTL ELF Sbjct: 2 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61 Query: 67 EAKLEKHQGNLMRASVELAKDWRTDRMLRRLEAMLLCADKETTLVITGNGDVLEP-NDGI 125 E KLE HQG+L++++VELAKDWRTDR LR+LEAML+ AD++ +L+ITG GDV++P D I Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121 Query: 126 GAIGSGGSYAQSAAKALYENTELSPAEIVKKSLTIAGELCIYTNLNHIIETL 177 AIGSGG+YA SAA+AL ENTELS EIV+KSL IAG++C++TN N IE L Sbjct: 122 LAIGSGGNYALSAARALVENTELSAHEIVEKSLRIAGDICVFTNTNFTIEEL 173 >PM1749 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit Pmu Pasteurella multocida Length = 176 Score = 243 bits (621), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 120/172 (69%), Positives = 147/172 (85%), Gaps = 1/172 (0%) Query: 7 TTILSVRRGNQVALGGDGQVTLGNIVMKGSARKVRKLYHGKVLVGFAGGTADAFTLLELF 66 TTI+SVRR QV +GGDGQV+LGN VMKG+ARKVR+LY+GKVL GFAGGTADAFTL ELF Sbjct: 2 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61 Query: 67 EAKLEKHQGNLMRASVELAKDWRTDRMLRRLEAMLLCADKETTLVITGNGDVLEPN-DGI 125 E KLE HQG+L++++VELAKDWRTDR LR+LEAML+ AD++ +L+ITG GDV++P D I Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEADQI 121 Query: 126 GAIGSGGSYAQSAAKALYENTELSPAEIVKKSLTIAGELCIYTNLNHIIETL 177 AIGSGG++A SAA+AL ENTELS EIV+KSL IAG++C+YTN + IE L Sbjct: 122 LAIGSGGNFALSAARALVENTELSAREIVEKSLKIAGDICVYTNTHFTIEEL 173 >hslV [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit Eco Escherichia coli K12 Length = 176 Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 115/171 (67%), Positives = 141/171 (82%) Query: 7 TTILSVRRGNQVALGGDGQVTLGNIVMKGSARKVRKLYHGKVLVGFAGGTADAFTLLELF 66 TTI+SVRR V + GDGQ TLGN VMKG+ +KVR+LY+ KV+ GFAGGTADAFTL ELF Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61 Query: 67 EAKLEKHQGNLMRASVELAKDWRTDRMLRRLEAMLLCADKETTLVITGNGDVLEPNDGIG 126 E KLE HQG+L++A+VELAKDWRTDRMLR+LEA+L AD+ +L+ITGNGDV++P + + Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 121 Query: 127 AIGSGGSYAQSAAKALYENTELSPAEIVKKSLTIAGELCIYTNLNHIIETL 177 AIGSGG YAQ+AA+AL ENTELS EI +K+L IAG++CIYTN H IE L Sbjct: 122 AIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEEL 172 >ZhslV [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit EcZ Escherichia coli O157:H7 EDL933 Length = 176 Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 115/171 (67%), Positives = 141/171 (82%) Query: 7 TTILSVRRGNQVALGGDGQVTLGNIVMKGSARKVRKLYHGKVLVGFAGGTADAFTLLELF 66 TTI+SVRR V + GDGQ TLGN VMKG+ +KVR+LY+ KV+ GFAGGTADAFTL ELF Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61 Query: 67 EAKLEKHQGNLMRASVELAKDWRTDRMLRRLEAMLLCADKETTLVITGNGDVLEPNDGIG 126 E KLE HQG+L++A+VELAKDWRTDRMLR+LEA+L AD+ +L+ITGNGDV++P + + Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 121 Query: 127 AIGSGGSYAQSAAKALYENTELSPAEIVKKSLTIAGELCIYTNLNHIIETL 177 AIGSGG YAQ+AA+AL ENTELS EI +K+L IAG++CIYTN H IE L Sbjct: 122 AIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEEL 172 >ECs4859 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit Ecs Escherichia coli O157:H7 Length = 176 Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 115/171 (67%), Positives = 141/171 (82%) Query: 7 TTILSVRRGNQVALGGDGQVTLGNIVMKGSARKVRKLYHGKVLVGFAGGTADAFTLLELF 66 TTI+SVRR V + GDGQ TLGN VMKG+ +KVR+LY+ KV+ GFAGGTADAFTL ELF Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61 Query: 67 EAKLEKHQGNLMRASVELAKDWRTDRMLRRLEAMLLCADKETTLVITGNGDVLEPNDGIG 126 E KLE HQG+L++A+VELAKDWRTDRMLR+LEA+L AD+ +L+ITGNGDV++P + + Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 121 Query: 127 AIGSGGSYAQSAAKALYENTELSPAEIVKKSLTIAGELCIYTNLNHIIETL 177 AIGSGG YAQ+AA+AL ENTELS EI +K+L IAG++CIYTN H IE L Sbjct: 122 AIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEEL 172 >VC2675 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit Vch Vibrio cholerae Length = 185 Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 114/172 (66%), Positives = 142/172 (82%) Query: 7 TTILSVRRGNQVALGGDGQVTLGNIVMKGSARKVRKLYHGKVLVGFAGGTADAFTLLELF 66 TTI+SVRR N+V + GDGQV+LGN VMKG+ARKVR+LY+ KVL GFAGGTADAFTL E F Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61 Query: 67 EAKLEKHQGNLMRASVELAKDWRTDRMLRRLEAMLLCADKETTLVITGNGDVLEPNDGIG 126 E+KL+ HQG+L +A+VELAKDWR+DR LRRLEA+L AD+ +L+ITGNGDVL+P + Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRRLEAILAVADETASLIITGNGDVLQPEHDLI 121 Query: 127 AIGSGGSYAQSAAKALYENTELSPAEIVKKSLTIAGELCIYTNLNHIIETLE 178 AIGSGG+YAQ+AA AL ENTEL I +K+L IAG++C++TN +H IE LE Sbjct: 122 AIGSGGNYAQAAAIALLENTELDARTIAEKALNIAGDICVFTNHHHTIEELE 173 >STM4092 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit Sty Salmonella typhimurium LT2 Length = 176 Score = 238 bits (608), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 114/171 (66%), Positives = 140/171 (81%) Query: 7 TTILSVRRGNQVALGGDGQVTLGNIVMKGSARKVRKLYHGKVLVGFAGGTADAFTLLELF 66 TTI+SVRR V + GDGQ TLGN VMKG+ +KVR+LY+ KV+ GFAGGTADAFTL ELF Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61 Query: 67 EAKLEKHQGNLMRASVELAKDWRTDRMLRRLEAMLLCADKETTLVITGNGDVLEPNDGIG 126 E KLE HQG+L++A+VELAKDWRTDRMLR+LEA+L AD+ +L+ITGNGDV++P + + Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 121 Query: 127 AIGSGGSYAQSAAKALYENTELSPAEIVKKSLTIAGELCIYTNLNHIIETL 177 AIGSGG YAQ+AA+AL ENTEL EI +K+L IAG++CIYTN H IE L Sbjct: 122 AIGSGGPYAQAAARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEEL 172 >BU578 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit Buc Buchnera sp. APS Length = 170 Score = 228 bits (581), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 105/166 (63%), Positives = 133/166 (80%) Query: 12 VRRGNQVALGGDGQVTLGNIVMKGSARKVRKLYHGKVLVGFAGGTADAFTLLELFEAKLE 71 +R N+V +GGDGQ TLGN +MK + +K+R LYH KV+ GFAGGTADAFTL E+F+ KL Sbjct: 1 MRLKNKVVIGGDGQATLGNTIMKSNVKKIRSLYHEKVIAGFAGGTADAFTLFEMFDKKLA 60 Query: 72 KHQGNLMRASVELAKDWRTDRMLRRLEAMLLCADKETTLVITGNGDVLEPNDGIGAIGSG 131 +QG L RA++ELAKDWR+DRMLR+LEA+L ADK+T+L+ITGNGDV++P D + AIGSG Sbjct: 61 MYQGQLQRAAIELAKDWRSDRMLRKLEALLAVADKKTSLIITGNGDVIQPEDDLIAIGSG 120 Query: 132 GSYAQSAAKALYENTELSPAEIVKKSLTIAGELCIYTNLNHIIETL 177 GSYAQS+A+AL ENT L +IV+KSL IA +CIYTN N I+ L Sbjct: 121 GSYAQSSARALIENTHLDANQIVRKSLNIAANICIYTNHNFTIKEL 166