BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0120.p (95 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PM1031 [J] COG0361 Translation initiation factor 1 (IF-1) Pmu Pa... 105 2e-23 HI0548 [J] COG0361 Translation initiation factor 1 (IF-1) Hin Ha... 103 7e-23 infA [J] COG0361 Translation initiation factor 1 (IF-1) Eco Esch... 102 2e-22 ZinfA [J] COG0361 Translation initiation factor 1 (IF-1) EcZ Esc... 102 2e-22 STM0953 [J] COG0361 Translation initiation factor 1 (IF-1) Sty S... 102 2e-22 ECs0969 [J] COG0361 Translation initiation factor 1 (IF-1) Ecs E... 102 2e-22 VC1737 [J] COG0361 Translation initiation factor 1 (IF-1) Vch Vi... 102 2e-22 RSc2239 [J] COG0361 Translation initiation factor 1 (IF-1) Rso R... 101 4e-22 YPO1370 [J] COG0361 Translation initiation factor 1 (IF-1) Ype Y... 101 4e-22 CC2343 [J] COG0361 Translation initiation factor 1 (IF-1) Ccr Ca... 99 2e-21 >PM1031 [J] COG0361 Translation initiation factor 1 (IF-1) Pmu Pasteurella multocida Length = 72 Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 45/70 (64%), Positives = 60/70 (85%) Query: 9 MAKEELIEMQGQVSEVLPDSRFRVALDNGHSLIAYTAGRMKKNFIKILAGDKVTLELSPY 68 MAKE+ IEMQG + E LP++ FRV L+NGH + A+ +G+M+KN+I+IL GDKVT+E++PY Sbjct: 1 MAKEDCIEMQGTILETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTIEMTPY 60 Query: 69 DLNKGRIIFR 78 DLNKGRIIFR Sbjct: 61 DLNKGRIIFR 70 >HI0548 [J] COG0361 Translation initiation factor 1 (IF-1) Hin Haemophilus influenzae Length = 84 Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 44/73 (60%), Positives = 62/73 (84%) Query: 6 KEKMAKEELIEMQGQVSEVLPDSRFRVALDNGHSLIAYTAGRMKKNFIKILAGDKVTLEL 65 ++ MAKE+ IEMQG + E LP++ FRV L+NGH + A+ +G+M+KN+I+IL GDKVT+E+ Sbjct: 10 EDTMAKEDCIEMQGTILETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVEM 69 Query: 66 SPYDLNKGRIIFR 78 +PYDL+KGRIIFR Sbjct: 70 TPYDLSKGRIIFR 82 >infA [J] COG0361 Translation initiation factor 1 (IF-1) Eco Escherichia coli K12 Length = 72 Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 45/70 (64%), Positives = 60/70 (85%) Query: 9 MAKEELIEMQGQVSEVLPDSRFRVALDNGHSLIAYTAGRMKKNFIKILAGDKVTLELSPY 68 MAKE+ IEMQG V E LP++ FRV L+NGH + A+ +G+M+KN+I+IL GDKVT+EL+PY Sbjct: 1 MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPY 60 Query: 69 DLNKGRIIFR 78 DL+KGRI+FR Sbjct: 61 DLSKGRIVFR 70 >ZinfA [J] COG0361 Translation initiation factor 1 (IF-1) EcZ Escherichia coli O157:H7 EDL933 Length = 72 Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 45/70 (64%), Positives = 60/70 (85%) Query: 9 MAKEELIEMQGQVSEVLPDSRFRVALDNGHSLIAYTAGRMKKNFIKILAGDKVTLELSPY 68 MAKE+ IEMQG V E LP++ FRV L+NGH + A+ +G+M+KN+I+IL GDKVT+EL+PY Sbjct: 1 MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPY 60 Query: 69 DLNKGRIIFR 78 DL+KGRI+FR Sbjct: 61 DLSKGRIVFR 70 >STM0953 [J] COG0361 Translation initiation factor 1 (IF-1) Sty Salmonella typhimurium LT2 Length = 72 Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 45/70 (64%), Positives = 60/70 (85%) Query: 9 MAKEELIEMQGQVSEVLPDSRFRVALDNGHSLIAYTAGRMKKNFIKILAGDKVTLELSPY 68 MAKE+ IEMQG V E LP++ FRV L+NGH + A+ +G+M+KN+I+IL GDKVT+EL+PY Sbjct: 1 MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPY 60 Query: 69 DLNKGRIIFR 78 DL+KGRI+FR Sbjct: 61 DLSKGRIVFR 70 >ECs0969 [J] COG0361 Translation initiation factor 1 (IF-1) Ecs Escherichia coli O157:H7 Length = 72 Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 45/70 (64%), Positives = 60/70 (85%) Query: 9 MAKEELIEMQGQVSEVLPDSRFRVALDNGHSLIAYTAGRMKKNFIKILAGDKVTLELSPY 68 MAKE+ IEMQG V E LP++ FRV L+NGH + A+ +G+M+KN+I+IL GDKVT+EL+PY Sbjct: 1 MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPY 60 Query: 69 DLNKGRIIFR 78 DL+KGRI+FR Sbjct: 61 DLSKGRIVFR 70 >VC1737 [J] COG0361 Translation initiation factor 1 (IF-1) Vch Vibrio cholerae Length = 72 Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 43/70 (61%), Positives = 61/70 (87%) Query: 9 MAKEELIEMQGQVSEVLPDSRFRVALDNGHSLIAYTAGRMKKNFIKILAGDKVTLELSPY 68 MAKE++IEMQG V + LP++ FRV L+NGH + A+ +G+M+KN+I+IL GDKVT+E++PY Sbjct: 1 MAKEDVIEMQGTVLDTLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVEMTPY 60 Query: 69 DLNKGRIIFR 78 DL+KGRI+FR Sbjct: 61 DLSKGRIVFR 70 >RSc2239 [J] COG0361 Translation initiation factor 1 (IF-1) Rso Ralstonia solanacearum Length = 72 Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 47/71 (66%), Positives = 59/71 (83%) Query: 9 MAKEELIEMQGQVSEVLPDSRFRVALDNGHSLIAYTAGRMKKNFIKILAGDKVTLELSPY 68 MAKEELIE +G VSE LPD+RFRV L+NG + AY +G+M+K+ I+ILAGD+V LE+SPY Sbjct: 1 MAKEELIEFEGVVSEALPDNRFRVQLENGVEVWAYASGKMQKHRIRILAGDRVKLEMSPY 60 Query: 69 DLNKGRIIFRH 79 DL KGRI +RH Sbjct: 61 DLTKGRINYRH 71 >YPO1370 [J] COG0361 Translation initiation factor 1 (IF-1) Ype Yersinia pestis Length = 72 Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 44/70 (62%), Positives = 60/70 (85%) Query: 9 MAKEELIEMQGQVSEVLPDSRFRVALDNGHSLIAYTAGRMKKNFIKILAGDKVTLELSPY 68 MAKE+ IEMQG V + LP++ FRV L+NGH + A+ +G+M+KN+I+IL GDKVT+EL+PY Sbjct: 1 MAKEDNIEMQGTVLDTLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPY 60 Query: 69 DLNKGRIIFR 78 DL+KGRI+FR Sbjct: 61 DLSKGRIVFR 70 >CC2343 [J] COG0361 Translation initiation factor 1 (IF-1) Ccr Caulobacter vibrioides Length = 72 Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 44/70 (62%), Positives = 59/70 (84%) Query: 9 MAKEELIEMQGQVSEVLPDSRFRVALDNGHSLIAYTAGRMKKNFIKILAGDKVTLELSPY 68 MAKEEL+E G VSE+LP++ FRV L+N H +IA+TAG+M+KN I++LAGDKV +E++PY Sbjct: 1 MAKEELLEFPGTVSELLPNATFRVKLENDHEIIAHTAGKMRKNRIRVLAGDKVLVEMTPY 60 Query: 69 DLNKGRIIFR 78 DL KGRI +R Sbjct: 61 DLTKGRITYR 70