BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0107.p (319 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value YPO2286 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 363 e-100 MK0601 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transp... 120 5e-27 DR1655 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transp... 86 1e-16 PA2596 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transp... 82 1e-15 DR1277 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transp... 81 2e-15 AGpT119 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 80 7e-15 ssuA [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transpor... 75 2e-13 BS_ssuA [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 74 5e-13 PA3445 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transp... 71 3e-12 ZycbO [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transpo... 70 5e-12 >YPO2286 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Ype Yersinia pestis Length = 343 Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust. Identities = 188/323 (58%), Positives = 248/323 (76%), Gaps = 6/323 (1%) Query: 1 MQKKLIALALLASAGFSAASHAADDVIRLGNLKFAHYGAVSYIKEIAPKCGIKVDEKVFA 60 ++K IA++ L S+ + A DV+RLGNLKFAHYGA+SY+KEIAPK IK++E++FA Sbjct: 19 LKKSFIAISALPLL-MSSMAWAQPDVVRLGNLKFAHYGAISYMKEIAPKYNIKIEERMFA 77 Query: 61 KGPDVMQGILAGELDVGTTASEAAISGRANGAPIYVVAGFAKGGARLVAGKDSGIKSVKD 120 KG D+ I+AG++D+ +A +AAI+ RA PIYV+AGFAKGGAR+V G +S IKSV D Sbjct: 78 KGIDIAPAIVAGQIDIAASAVDAAIAARAQNIPIYVIAGFAKGGARIVIGNNSSIKSVAD 137 Query: 121 LKGKKVGVTRGGIHEVLLDAELGQNGLS-----AKDVTIVYLAFADLNQALLGKNIDAMM 175 KGKKVGV RGG E+LL AEL + GL+ KDV I+Y+A+ADLNQAL N+DA+ Sbjct: 138 FKGKKVGVARGGAQELLLLAELDKYGLTWSDRPGKDVQIIYMAYADLNQALQSGNLDAIS 197 Query: 176 QSEPQSSQAINKGFGVEVMKPYDTPIGEPYRTMVMTEKFYNEKRPLAEKFMRCFLEATKT 235 QSEP +SQAIN G+GVE++KPYDTP+G P R ++MTE Y EK +A + ++ F++AT T Sbjct: 198 QSEPHASQAINIGYGVELLKPYDTPVGVPIRALIMTEAMYKEKPEVAARVLKLFVDATNT 257 Query: 236 FIDKPEVAEKYVREVIFKNQISKEDFYDAIGNSPYAYDITAEHIQITTDTMAKYGTGKMA 295 FI +PE+AE+YVR+ +FKNQI+ +D+ DAIGNSP++YDIT EH+Q+TTD M KYG G+M Sbjct: 258 FIQQPEIAEEYVRKEMFKNQITSQDYQDAIGNSPFSYDITVEHVQVTTDLMRKYGIGRMN 317 Query: 296 KPPVAKDWVKTDLLEQAKKSMNL 318 PPVA DWVK DLLE AKKS+ + Sbjct: 318 NPPVAADWVKNDLLEAAKKSIGV 340 >MK0601 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Mka Methanopyrus kandleri AV19 Length = 319 Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 99/321 (30%), Positives = 159/321 (49%), Gaps = 18/321 (5%) Query: 3 KKLIALALLASAGFSAA-----SHAADDVIRLGNLKFAHYGA--VSYIKEIAPKCGIKVD 55 KK++AL ++ A A +V+R+G H A V+ K++ K GIKV+ Sbjct: 2 KKVVALGIVIVAVLGGALGYYYYTTTSNVVRIGYQPSDHSAALFVAMAKKMFEKEGIKVE 61 Query: 56 EKVFAKGPDVMQGILAGELDVGTTASEAAISGRANGAPIYVVAGFAKGGARLVAGKDSG- 114 F GP Q + AG++DV AI+ + G PI +VAG + G+ +V KD Sbjct: 62 TYEFKAGPPETQALAAGKIDVAYIGCVPAITAYSKGVPIKIVAGVNQEGSAIVVRKDEAG 121 Query: 115 -IKSVKDLKGKKVG-VTRGGIHEVLLDAELGQNGLSA-KDVTIVYLAFADLNQALLGKNI 171 IK +KDLKGK+V + +G I + +L L + GL KDV IV + AD AL K I Sbjct: 122 KIKDIKDLKGKRVAELMKGSIQDCMLRTALKRAGLDPDKDVDIVEMKTADAVNALGAKQI 181 Query: 172 DAMMQSEPQSSQAINKGFGVEVMKPYDTPIGEPYRTMVMTEKFYNEKRPLAEKFMRCFLE 231 DA ++ EP + A+ KGFGV +M +VM + F LA+K ++ + Sbjct: 182 DAFIEPEPGPTMAVKKGFGVRLMDTGKIWSHHQCCVLVMRKDFIERHPNLAKKVLKVHVM 241 Query: 232 ATKTFIDKPEVAEKYV-REVIFKNQISKEDFYDAIGNSPYAYDITAEHIQITTDTMAKYG 290 ATK + P+ A K +++ ++ KE A+ + Y+ D+ + I++ + + G Sbjct: 242 ATKYVQEHPDEAAKITAKQLKVPEEVEKE----AMRHVRYSVDLDVDSIKMFARFLKQLG 297 Query: 291 TGKMAKPPVAKDWVKTDLLEQ 311 K + P D++ LL++ Sbjct: 298 YIK--ELPDWSDFIDLKLLKE 316 >DR1655 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Dra Deinococcus radiodurans Length = 337 Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 71/241 (29%), Positives = 114/241 (47%), Gaps = 13/241 (5%) Query: 50 CGIKVDEKVFAKGPDVMQGILAGELDVGTTASEAAISGRANGAPIYVVAGFAKGGARLVA 109 G+K+ + FA G V + + AG +D ++ G P+ V AG A GA LV Sbjct: 66 SGVKLVVREFANGSQVNEALAAGAIDASYVGPGPVMNAFMRGVPVQVYAGAANAGAVLVG 125 Query: 110 GKDSGIKSVKDLKGKKVGV-TRGGIHEVLLDAELGQNGLSAKD----VTIVYLAFADLNQ 164 KDSGI++VK L GKKV V TRG ++ L L +NGL A D VTIV + A++ Sbjct: 126 RKDSGIRNVKGLAGKKVAVPTRGSTQDISLRHLLHENGLKASDEGGNVTIVPIDPANMPA 185 Query: 165 ALLGKNIDAMMQSEPQSSQAINKGFGVE-VMKPYDTPIGEPYRT--MVMTEKFYNEKRPL 221 A +GK +DA + EP AI +G G + ++ G Y + +V+ K+ Sbjct: 186 AFVGKQVDAALVQEPWG--AIMEGQGAKLIVNEKGVWNGGNYTSTVLVVNTKYAAANPET 243 Query: 222 AEKFMRCFLEATKTFIDKPEVAEKYVREVIFK---NQISKEDFYDAIGNSPYAYDITAEH 278 + +R L A A+K + + I+ + + + + A+ + +DI + Sbjct: 244 VKDLLRGHLAAINLINKSNAGAQKAISDQIYAFTGKRPNSAELFKALARTKVTWDINLQT 303 Query: 279 I 279 + Sbjct: 304 L 304 >PA2596 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Pae Pseudomonas aeruginosa Length = 328 Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 56/161 (34%), Positives = 82/161 (50%), Gaps = 3/161 (1%) Query: 27 IRLGNLKFAHYGAVSYIKEIAPKCGIKVDEKVFAKGPDVMQGILAGELDVGTTASEAAIS 86 +RLG++K Y A+ E+ K++ F G V++ + AG LD+G T + Sbjct: 29 LRLGDVKGDRYAALRASGELD-DLPYKLEMSAFPSGAPVLEALNAGALDIGFTGDIPFLF 87 Query: 87 GRANGAPIYVVAG--FAKGGARLVAGKDSGIKSVKDLKGKKVGVTRGGIHEVLLDAELGQ 144 A GAP+ V F LV GKDS I+SV LKGK++ V RGG L L + Sbjct: 88 VYAAGAPLKAVGAWHFNPATVALVVGKDSPIRSVAGLKGKRIAVNRGGWGHFLALGALRR 147 Query: 145 NGLSAKDVTIVYLAFADLNQALLGKNIDAMMQSEPQSSQAI 185 GL +DV+ +L D AL+ ++DA + EP +S A+ Sbjct: 148 AGLGPQDVSFSFLGPVDGRAALVRGSVDAWVPWEPYTSSAV 188 >DR1277 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Dra Deinococcus radiodurans Length = 325 Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 95/207 (45%), Gaps = 6/207 (2%) Query: 53 KVDEKVFAKGPDVMQGILAGELDVGTTASEAAISGRANGAPIYVVAGFAKGGARLVAGKD 112 ++D + F G + + AG++D+ AIS + G P+ ++AG A+ GA LVA KD Sbjct: 65 RLDARTFVSGTTLSEAFAAGQIDIAYIGPGPAISAASRGVPVQILAGAAEAGAVLVARKD 124 Query: 113 SGIKSVKDLKGKKVGV-TRGGIHEVLLDAELGQNGLSAK----DVTIVYLAFADLNQALL 167 S I++ DL GK V V + G ++ L LG+NGL K VT+V + AD+ A Sbjct: 125 SSIRTAHDLDGKIVAVPSLGNTQDISLRHLLGENGLKDKAAGGSVTVVPIPPADVVAAFA 184 Query: 168 GKNIDAMMQSEPQSSQAINKGFGVEVMKPYDTPIGE-PYRTMVMTEKFYNEKRPLAEKFM 226 GK DA + EP + +G V + G P +++ +F L F+ Sbjct: 185 GKRADAALVPEPWGAALEAQGHRVIGNEKTVWRGGNYPSAILIVNTRFAQANPDLVAAFL 244 Query: 227 RCFLEATKTFIDKPEVAEKYVREVIFK 253 + A P A+ V + K Sbjct: 245 KAHASAVAFLNKSPAAAQNAVNRQLQK 271 >AGpT119 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 320 Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 60/180 (33%), Positives = 92/180 (51%), Gaps = 15/180 (8%) Query: 22 AADDVIRLGNLKFAHYGAV------SYIKEIAPKCGIK---VDEKVFAKGPDVMQGILAG 72 AA + + +G + F Y A+ ++ E K G+K + FA GP V + +G Sbjct: 24 AAAETVNIGFMPFVPYSAILLAKQKGWVDEEFTKAGLKDVEIKWHQFAGGPPVNEAFASG 83 Query: 73 ELDVGTTASEAAISGRANGAPIYVVAGFAKGGAR---LVAGKDSGIKSVKDLKGKKVGVT 129 LD+ ++ ANG V G A GA+ L+ KDS +K+VKDLKGKKV Sbjct: 84 ALDIAALGDTPSLIAFANGIDTRFV-GLACKGAKAEALIVLKDSSVKTVKDLKGKKVATL 142 Query: 130 RGG-IHEVLLDAELGQNGLSAKDVTIVYLAFADLNQALLGKNIDAMMQSEPQSSQAINKG 188 RGG +HE+L+ L + GL DV + L D+ AL ++DA++ EP ++ ++G Sbjct: 143 RGGNVHELLV-LVLAEAGLKISDVEFLNLGLQDMGIALTKGDVDAVLVWEPLLTKLDSEG 201 >ssuA [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Eco Escherichia coli K12 Length = 333 Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 72/228 (31%), Positives = 108/228 (47%), Gaps = 19/228 (8%) Query: 4 KLIALALLASAGFSAASHAADDVIRLGNLKFAHYGAV-----SYIKEIAPKCGIKVDEKV 58 KL LL+ + F+ A+ ++ + +R+G K G V +++ P+ I E Sbjct: 20 KLALAGLLSVSTFAVAAESSPEALRIGYQK-GSIGMVLAKSHQLLEKRYPESKISWVE-- 76 Query: 59 FAKGPDVMQGILAGELDVGTTASEAAISGRANGAP-IYVVAGFAKGGARLV-AGKDSGIK 116 F GP +++ + G +D+G+T I +A GA +YV K A ++ ++S IK Sbjct: 77 FPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSPIK 136 Query: 117 SVKDLKGKKVGVTRGGIHEVLLDAELGQNGLSAKDVTIVYLAFADLNQALLGKNIDAMMQ 176 +V DLKG KV +G LL L Q GL D+ YL AD A N+DA Sbjct: 137 TVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQGNVDAWAI 196 Query: 177 SEPQSSQAINKGFGVEVMKPYDTPIGEPYRTMVMTEKFYNEKRPLAEK 224 +P S A+ +G GV V+K T + + T FY RP AEK Sbjct: 197 WDPYYSAALLQG-GVRVLKD-GTDLNQ-------TGSFYLAARPYAEK 235 >BS_ssuA [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Bsu Bacillus subtilis Length = 332 Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 75/246 (30%), Positives = 113/246 (45%), Gaps = 15/246 (6%) Query: 1 MQKKLIALA----LLASAGFSAAS--HAADDVIRLGNLKFAHYGAVS----YIKEIAPKC 50 M+K LI L LLA G + AS H IR+G + ++ + ++ K Sbjct: 1 MKKGLIVLVAVIFLLAGCGANGASGDHKQLKEIRIGIQQSLSPLLIAKEKGWFEDAFEKE 60 Query: 51 GIKVDEKVFAKGPDVMQGILAGELDVGTTASEAAISGRANGAPIYVVAGFAKGGAR---L 107 GIKV F GP +G+ A +LD + I+G+A G + G ++ G + + Sbjct: 61 GIKVKWVEFQSGPPQFEGLAADKLDFSQVGNSPVIAGQAAGIDFKEI-GLSQDGLKANGI 119 Query: 108 VAGKDSGIKSVKDLKGKKVGVTRGGIHEVLLDAELGQNGLSAKDVTIVYLAFADLNQALL 167 + ++SGI+ VK LKGKK+ V +G L L Q GLSA DVTI+ L + A Sbjct: 120 LVNQNSGIQDVKGLKGKKIAVAKGSSGFDFLYKALDQVGLSANDVTIIQLQPDEAASAFE 179 Query: 168 GKNIDAMMQSEPQSSQAINKGFGVEVMKPYDTPIGEPYRTMVMTEKFYNEKRPLAEKFMR 227 ++DA EP S K ++ T + P T+V T KF E +F++ Sbjct: 180 NGSVDAWSIWEPYLSLETMKHGAKILVNGESTDLYSPGFTLVRT-KFSEEHPDEVVRFLK 238 Query: 228 CFLEAT 233 F +A Sbjct: 239 VFNKAV 244 >PA3445 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Pae Pseudomonas aeruginosa Length = 323 Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 60/202 (29%), Positives = 90/202 (44%), Gaps = 25/202 (12%) Query: 51 GIKVDEKVFAKGPDVMQGILAGELDVGTTASEAAISGRANGAPIYVVA--GFAKGGARLV 108 G+KV F GP +++G+ G +D G T + +A GA + VA A ++ Sbjct: 59 GVKVQWTEFPGGPQLLEGLNVGSIDFGVTGETPPVFAQAAGADLLYVAYEPPAPTSEAIL 118 Query: 109 AGKDSGIKSVKDLKGKKVGVTRGGIHEVLLDAELGQNGLSAKDVTIVYLAFADLNQALLG 168 KDS I+SV +LKG+KV + +G LL L Q GL D+ VYL AD A Sbjct: 119 LPKDSPIRSVAELKGRKVALNKGSNVHYLLVRALEQAGLKYSDIQPVYLPPADARAAFER 178 Query: 169 KNIDAMMQSEPQSSQAINKGFGVEVMKPYDTPIGEPYRTMVMTEKFYNEKRPLAEKFMRC 228 ++DA + +P + A K V+ D R +V +FY R A++ Sbjct: 179 HSVDAWVIWDPYQA-AAEKQLSARVL--VDG------RELVDNHQFYLATRTYAQRH--- 226 Query: 229 FLEATKTFIDKPEVAEKYVREV 250 P+V +K V E+ Sbjct: 227 -----------PQVLDKLVDEI 237 >ZycbO [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components EcZ Escherichia coli O157:H7 EDL933 Length = 333 Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 70/228 (30%), Positives = 106/228 (46%), Gaps = 19/228 (8%) Query: 4 KLIALALLASAGFSAASHAADDVIRLGNLKFAHYGAV-----SYIKEIAPKCGIKVDEKV 58 KL + LL+ + A+ ++ + +R+G K G V +++ P+ I E Sbjct: 20 KLALVGLLSVSTIVVAAESSPEALRIGYQK-GSIGMVLAKSHQLLEKRYPQSKISWVE-- 76 Query: 59 FAKGPDVMQGILAGELDVGTTASEAAISGRANGAPI-YVVAGFAKGGARLV-AGKDSGIK 116 F GP +++ + G +D+G+T I +A GA + YV K A ++ ++S IK Sbjct: 77 FPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLLYVGVEPPKPKAEVILVAENSPIK 136 Query: 117 SVKDLKGKKVGVTRGGIHEVLLDAELGQNGLSAKDVTIVYLAFADLNQALLGKNIDAMMQ 176 + DLKG KV +G LL L Q GL D+ YL AD A N+DA Sbjct: 137 TAADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQGNVDAWAI 196 Query: 177 SEPQSSQAINKGFGVEVMKPYDTPIGEPYRTMVMTEKFYNEKRPLAEK 224 +P S A+ +G GV V+K T + + T FY RP AEK Sbjct: 197 WDPYYSAALLQG-GVRVLKD-GTDLNQ-------TGSFYLAARPYAEK 235