BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0072.p (215 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value XF2170 [R] COG1881 Phospholipid-binding protein Xfa Xylella fast... 188 7e-48 AGl1304 [R] COG1881 Phospholipid-binding protein Atu Agrobacteri... 145 8e-35 aq_1250 [R] COG1881 Phospholipid-binding protein Aae Aquifex aeo... 82 6e-16 ZybhB [R] COG1881 Phospholipid-binding protein EcZ Escherichia c... 82 1e-15 ECs0851 [R] COG1881 Phospholipid-binding protein Ecs Escherichia... 82 1e-15 ybhB [R] COG1881 Phospholipid-binding protein Eco Escherichia co... 81 1e-15 STM1081 [R] COG1881 Phospholipid-binding protein Sty Salmonella ... 79 5e-15 ybcL [R] COG1881 Phospholipid-binding protein Eco Escherichia co... 79 6e-15 STM0792 [R] COG1881 Phospholipid-binding protein Sty Salmonella ... 78 1e-14 VC1075 [R] COG1881 Phospholipid-binding protein Vch Vibrio cholerae 71 1e-12 >XF2170 [R] COG1881 Phospholipid-binding protein Xfa Xylella fastidiosa 9a5c Length = 204 Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 94/214 (43%), Positives = 132/214 (61%), Gaps = 15/214 (7%) Query: 1 MKFWSDSFKDGATIPGEFAFAVMDPKTHVALSGNRNPHFAWSELPAGTKSLALVMHDPDV 60 M S+ FK+G IP E A D + NRNPH AW ++P T+S AL+ DPDV Sbjct: 1 MHLISNDFKNGQPIPLECAAGQTD-----GFAPNRNPHLAWDDVPENTRSFALLCIDPDV 55 Query: 61 PSRGDDVNQEGKTVPLELPRVDFYHWTLVDIPASVTEIKAGQFSNGVTARGK---PGPAV 117 PS + + + +P+ PR+DF HW + D+ A + I G S+G RGK PGPA Sbjct: 56 PSIPETIGRTDMEIPVTQPRIDFVHWVMADLSADLRMIAHGSCSDGFVVRGKTMPPGPA- 114 Query: 118 LGEVMPGARQGINDYTGWFAGDGDMRGDYFGYDGPCPPWNDALVHRYIFTLYALDVEQLP 177 G RQG+NDYT +FA +M GDY+GYDGP PP+ND +HRY+F L+AL++E+LP Sbjct: 115 ------GTRQGLNDYTKFFANTPEMAGDYYGYDGPYPPFNDLRIHRYLFRLFALNLERLP 168 Query: 178 VAGNLEGSVVVTALRDHVLEQASITGLYTLNPNA 211 + + +G ++ A++ HVL +A++ G YTLNP A Sbjct: 169 LPQHFDGPALLRAIQGHVLTEAALYGTYTLNPKA 202 >AGl1304 [R] COG1881 Phospholipid-binding protein Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 236 Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 75/184 (40%), Positives = 102/184 (55%), Gaps = 5/184 (2%) Query: 32 SGNRNPHFAWSELPAGTKSLALVMHDPDVPSRGDDVNQEGKTVPLELPRVDFYHWTLVDI 91 S + +P +WS P GT+S AL+M DPDVP +N+ G T+P E PR+ +HW L DI Sbjct: 55 SKDVSPGVSWSAGPEGTRSYALLMIDPDVPQDFSLINKPGTTIPAEAPRISVFHWVLADI 114 Query: 92 PASVTEIKAGQFSNGVTARGKPGPAVLGEVMPGARQGINDYTGWFAGDGDMRGDYFGYDG 151 PA + I G S G+ GKP +G V P +G N YT + A M G Y GYDG Sbjct: 115 PAGIMSIGEGAESEGLVPGGKP----VG-VTPHGLRGANVYTSFLAKTDGMAGTYGGYDG 169 Query: 152 PCPPWNDALVHRYIFTLYALDVEQLPVAGNLEGSVVVTALRDHVLEQASITGLYTLNPNA 211 PCPP ND +H Y ++ALDV L ++G G V ++ H+L Y+LNP+ Sbjct: 170 PCPPINDQRIHHYTLKVFALDVPTLGLSGPFTGEDVKKSMAGHILASGEAIATYSLNPSL 229 Query: 212 VPRS 215 +P + Sbjct: 230 IPAA 233 >aq_1250 [R] COG1881 Phospholipid-binding protein Aae Aquifex aeolicus Length = 171 Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 83/205 (40%), Gaps = 55/205 (26%) Query: 1 MKFWSDSFKDGATIPGEFAFAVMDPKTHVALSGNRNPHFAWSELPAGTKSLALVMHDPDV 60 M+ +S SFK+G IP K + + +PH W ++P GTKS L+M DPD Sbjct: 19 MEVFSRSFKNGEEIP----------KVYTCDGKDISPHIGWEDVPEGTKSFVLIMDDPDA 68 Query: 61 PSRGDDVNQEGKTVPLELPRVDFYHWTLVDIPASVTEIKAGQFSNGVTARGKPGPAVLGE 120 P F HW + DIP+ E+ + P V Sbjct: 69 PIG------------------TFTHWVVYDIPSQTRELL------------EDFPKV--P 96 Query: 121 VMPGARQGINDYTGWFAGDGDMRGDYFGYDGPCPPWNDALVHRYIFTLYALDVEQLPVAG 180 + G +QGIND+ GY GPCPP HRY F ++AL VE L + Sbjct: 97 EVSGIKQGINDF------------GRVGYGGPCPPRGHGY-HRYFFKVFALSVESLGLPP 143 Query: 181 NLEGSVVVTALRDHVLEQASITGLY 205 V + +L QA I GLY Sbjct: 144 GASRKDVELKMNGKILAQAHIIGLY 168 >ZybhB [R] COG1881 Phospholipid-binding protein EcZ Escherichia coli O157:H7 EDL933 Length = 158 Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 92/207 (44%), Gaps = 50/207 (24%) Query: 1 MKFWSDSFKDGATIPGEFAFAVMDPKTHVALSGNRNPHFAWSELPAGTKSLALVMHDPDV 60 MK S+ +DG +P F M N +PH AW ++PAGTKS + +DPD Sbjct: 1 MKLISNDLRDGDKLPHRHVFNGMGYD-----GDNISPHLAWDDVPAGTKSFVVTCYDPDA 55 Query: 61 PSRGDDVNQEGKTVPLELPRVDFYHWTLVDIPASVTEIKAGQFSNGVTARGKPGPAVLGE 120 P+ ++HW +V++PA + G F +G+ A Sbjct: 56 PTGS-----------------GWWHWVVVNLPADTRVLPQG-FGSGLVA----------- 86 Query: 121 VMP-GARQGINDYTGWFAGDGDMRGDYFGYDGPCPPWNDALVHRYIFTLYALDVEQLPVA 179 MP G Q D+ GYDG PP + HRYIFT++ALDVE++ V Sbjct: 87 -MPDGVLQTRTDFG------------KTGYDGAAPPKGE--THRYIFTVHALDVERIDVD 131 Query: 180 GNLEGSVVVTALRDHVLEQASITGLYT 206 G++V + H L ASIT +++ Sbjct: 132 EGASGAMVGFNVHFHSLASASITAMFS 158 >ECs0851 [R] COG1881 Phospholipid-binding protein Ecs Escherichia coli O157:H7 Length = 158 Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 92/207 (44%), Gaps = 50/207 (24%) Query: 1 MKFWSDSFKDGATIPGEFAFAVMDPKTHVALSGNRNPHFAWSELPAGTKSLALVMHDPDV 60 MK S+ +DG +P F M N +PH AW ++PAGTKS + +DPD Sbjct: 1 MKLISNDLRDGDKLPHRHVFNGMGYD-----GDNISPHLAWDDVPAGTKSFVVTCYDPDA 55 Query: 61 PSRGDDVNQEGKTVPLELPRVDFYHWTLVDIPASVTEIKAGQFSNGVTARGKPGPAVLGE 120 P+ ++HW +V++PA + G F +G+ A Sbjct: 56 PTGS-----------------GWWHWVVVNLPADTRVLPQG-FGSGLVA----------- 86 Query: 121 VMP-GARQGINDYTGWFAGDGDMRGDYFGYDGPCPPWNDALVHRYIFTLYALDVEQLPVA 179 MP G Q D+ GYDG PP + HRYIFT++ALDVE++ V Sbjct: 87 -MPDGVLQTRTDFG------------KTGYDGAAPPKGE--THRYIFTVHALDVERIDVD 131 Query: 180 GNLEGSVVVTALRDHVLEQASITGLYT 206 G++V + H L ASIT +++ Sbjct: 132 EGASGAMVGFNVHFHSLASASITAMFS 158 >ybhB [R] COG1881 Phospholipid-binding protein Eco Escherichia coli K12 Length = 158 Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 92/207 (44%), Gaps = 50/207 (24%) Query: 1 MKFWSDSFKDGATIPGEFAFAVMDPKTHVALSGNRNPHFAWSELPAGTKSLALVMHDPDV 60 MK S+ +DG +P F M N +PH AW ++PAGTKS + +DPD Sbjct: 1 MKLISNDLRDGDKLPHRHVFNGMGYD-----GDNISPHLAWDDVPAGTKSFVVTCYDPDA 55 Query: 61 PSRGDDVNQEGKTVPLELPRVDFYHWTLVDIPASVTEIKAGQFSNGVTARGKPGPAVLGE 120 P+ ++HW +V++PA + G F +G+ A Sbjct: 56 PTGS-----------------GWWHWVVVNLPADTRVLPQG-FGSGLVA----------- 86 Query: 121 VMP-GARQGINDYTGWFAGDGDMRGDYFGYDGPCPPWNDALVHRYIFTLYALDVEQLPVA 179 MP G Q D+ GYDG PP + HRYIFT++ALD+E++ V Sbjct: 87 -MPDGVLQTRTDFG------------KTGYDGAAPPKGE--THRYIFTVHALDIERIDVD 131 Query: 180 GNLEGSVVVTALRDHVLEQASITGLYT 206 G++V + H L ASIT +++ Sbjct: 132 EGASGAMVGFNVHFHSLASASITAMFS 158 >STM1081 [R] COG1881 Phospholipid-binding protein Sty Salmonella typhimurium LT2 Length = 182 Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 60/193 (31%), Positives = 84/193 (43%), Gaps = 45/193 (23%) Query: 14 IPGEFAFAVMDPKTHVALSG-NRNPHFAWSELPAGTKSLALVMHDPDVPSRGDDVNQEGK 72 IP +F SG N +P +W PAGTKS A+ + DPD P+ Sbjct: 32 IPADFRLTQQHVFKGFGCSGENISPQLSWRNPPAGTKSYAITVFDPDAPTGSG------- 84 Query: 73 TVPLELPRVDFYHWTLVDIPASVTEIKAGQFSNGVTARGKPGPAVLGEVMPGARQGINDY 132 ++HWT+V+IPA + ++ G A K PA G QG ND+ Sbjct: 85 ----------WWHWTMVNIPAQIHDLPTG-------ADKKTLPA-------GVVQGRNDF 120 Query: 133 TGWFAGDGDMRGDYFGYDGPCPPWNDALVHRYIFTLYALDVEQLPVAGNLEGSVVVTALR 192 Y G+ G CPP +D HRY FT++AL+ LP+ G++V L Sbjct: 121 ------------GYAGFGGACPPPSDK-PHRYQFTVWALNTATLPLDSESSGALVGFMLN 167 Query: 193 DHVLEQASITGLY 205 HV+ +A T Y Sbjct: 168 AHVIAKAKFTATY 180 >ybcL [R] COG1881 Phospholipid-binding protein Eco Escherichia coli K12 Length = 183 Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 83/176 (47%), Gaps = 41/176 (23%) Query: 33 GNRNPHFAWSELPAGTKSLALVMHDPDVPSRGDDVNQEGKTVPLELPRVDFYHWTLVDIP 92 GN +P WS +P GTKS A+ ++DPD P+ ++HWT+V+IP Sbjct: 49 GNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGS-----------------GWWHWTVVNIP 91 Query: 93 ASVTEIKAGQFSNGVTARGKPGPAVLGEVMPGARQGINDYTGWFAGDGDMRGDYFGYDGP 152 A+VT + V A + G ++ GA QG ND+ Y G+ G Sbjct: 92 ATVTYLP-------VDAGRRDGT----KLPTGAVQGRNDF------------GYAGFGGA 128 Query: 153 CPPWNDALVHRYIFTLYALDVEQLPVAGNLEGSVVVTALRDHVLEQASITGLYTLN 208 CPP D H Y F ++AL E++PV N G++V L + + A IT +Y + Sbjct: 129 CPPKGDK-PHHYQFKVWALKTEKIPVDSNSSGALVGYMLNANKIATAEITPVYEIK 183 >STM0792 [R] COG1881 Phospholipid-binding protein Sty Salmonella typhimurium LT2 Length = 158 Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/206 (29%), Positives = 89/206 (43%), Gaps = 48/206 (23%) Query: 1 MKFWSDSFKDGATIPGEFAFAVMDPKTHVALSGNRNPHFAWSELPAGTKSLALVMHDPDV 60 MK S+ +DG +P F M N +PH AW +P GTKS + +DPD Sbjct: 1 MKLISNDLRDGDKLPHRHVFNGMGYD-----GDNISPHLAWDNVPMGTKSFVVTCYDPDA 55 Query: 61 PSRGDDVNQEGKTVPLELPRVDFYHWTLVDIPASVTEIKAGQFSNGVTARGKPGPAVLGE 120 P+ ++HW +V++PA + G F +G+ A Sbjct: 56 PTGSG-----------------WWHWVVVNLPADTRVLTQG-FGSGLVA----------- 86 Query: 121 VMPGARQGINDYTGWFAGDGDMRGDYFGYDGPCPPWNDALVHRYIFTLYALDVEQLPVAG 180 V G Q D+ GY G PP + HRYIFT++ALDVE+L V Sbjct: 87 VPDGVIQTRTDFG------------KAGYGGAAPPKGE--THRYIFTVHALDVERLDVDE 132 Query: 181 NLEGSVVVTALRDHVLEQASITGLYT 206 + G++V + H L ASIT +++ Sbjct: 133 DASGAMVGFNVHFHSLASASITAMFS 158 >VC1075 [R] COG1881 Phospholipid-binding protein Vch Vibrio cholerae Length = 180 Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 85/206 (41%), Gaps = 53/206 (25%) Query: 1 MKFWSDSFKDGATIPGEFAFAVMDPKTHVALSG-NRNPHFAWSELPAGTKSLALVMHDPD 59 M S ++G+ + F F SG N +P +W+ P GTKS A+ +DPD Sbjct: 24 MTLTSQDIQEGSRMAKHFVF------NGFGCSGDNLSPQLSWNNAPKGTKSFAITAYDPD 77 Query: 60 VPSRGDDVNQEGKTVPLELPRVDFYHWTLVDIPASVTEIKAGQFSNGVTARGKPGPAVLG 119 P+ ++HW +DI A + ARG Sbjct: 78 APTGS-----------------GWWHWVALDIAADQHNV----------ARGA------A 104 Query: 120 EVMPGARQGINDYTGWFAGDGDMRGDYFGYDGPCPPWNDALVHRYIFTLYALDVEQLPVA 179 + + G R+ NDY + G+ G CPP + HRY FT++AL E++ + Sbjct: 105 KQLKGVRELNNDY------------GFSGFGGACPPQGHGM-HRYQFTVWALPFEKMEIP 151 Query: 180 GNLEGSVVVTALRDHVLEQASITGLY 205 ++V LR + LEQA++T Y Sbjct: 152 QGASNALVGFMLRANALEQATLTATY 177