BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0058.p         (267 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ZmhpD [Q] COG3971 2-keto-4-pentenoate hydratase EcZ Escherichia ...    67   5e-11
RSp0892 [Q] COG3971 2-keto-4-pentenoate hydratase Rso Ralstonia ...    65   2e-10
ECs0405 [Q] COG3971 2-keto-4-pentenoate hydratase Ecs Escherichi...    64   3e-10
mhpD [Q] COG3971 2-keto-4-pentenoate hydratase Eco Escherichia c...    64   3e-10

>ZmhpD [Q] COG3971 2-keto-4-pentenoate hydratase EcZ Escherichia coli
           O157:H7 EDL933
          Length = 269

 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 30/243 (12%)

Query: 21  SVEDAYEIAHNIRNIRVAQGEQPIGRKIGFVVRKNWERYGIIDDARIPTWAPMYDTTVRF 80
           + E AY I H      VAQG + +GRK+G    K  ++ G+          P + T   F
Sbjct: 34  NAEAAYAIQHINVQYDVAQGRRVVGRKVGLTHPKVQQQLGVDQ--------PDFGTL--F 83

Query: 81  AEDNHGLQSL---TGAVQPRIEPEIVFKLGKT-PAPDASLEELADCLEWMAHGFEIVVCP 136
           A+  +G   +   +  +QPRIE EI   L +  PA D + +EL + +EW+    E+V   
Sbjct: 84  ADMCYGDNEIIPFSRVLQPRIEAEIALVLNRDLPATDITFDELYNAIEWVLPALEVVGSR 143

Query: 137 FPKWEFTVADSIAAFGLHGTLIVGEPHVLSSASRHHLPQILASASVSLSCSTESASVLRA 196
              W     D++A     G  ++G P     A R   P  L   + ++  +  +  V  +
Sbjct: 144 IRDWSIQFVDTVADNASCGVYVIGGP-----AQR---PAGLDLKNCAMKMTRNNEEV--S 193

Query: 197 AGFCNDEMDSPLH-ALWHLHQLLQKQTRFRK-LQAGEIITTGTWTDACPIEPGQTWTTAF 254
           +G  ++ +  PL+ A+W    L +K     + L+AG+II TG       +  G  +    
Sbjct: 194 SGRGSECLGHPLNAAVW----LARKMASLGEPLRAGDIILTGALGPMVAVNAGDRFEAHI 249

Query: 255 SGV 257
            G+
Sbjct: 250 EGI 252


>RSp0892 [Q] COG3971 2-keto-4-pentenoate hydratase Rso Ralstonia
           solanacearum
          Length = 263

 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 7/142 (4%)

Query: 8   SKVIPRISESEPLSVEDAYEIAHNIRNIRVAQGEQPIGRKIGFVVRKNWERYGIIDDARI 67
           ++ I +  E+E L+V DAY I       R+A+GE+  G K+GF  R    + G+ D    
Sbjct: 19  ARAIAQFGEAEQLTVPDAYAIQAASIARRLARGERRTGVKMGFTSRAKMVQMGVHD---- 74

Query: 68  PTWAPMYDTTVRFAEDNHGLQSLTGAVQPRIEPEIVFKLGKTPAPDASLEELADCLEWMA 127
             W  + D     A +      L+  V PR+EPE+ F L K   P ASL E    +  +A
Sbjct: 75  VIWGRLTDA---MALEEGVAVPLSRYVHPRVEPELAFLLAKPLPPRASLAEALASVAAVA 131

Query: 128 HGFEIVVCPFPKWEFTVADSIA 149
              E++   +  ++F++ D IA
Sbjct: 132 PALEVIDSRYEHFKFSLTDVIA 153


>ECs0405 [Q] COG3971 2-keto-4-pentenoate hydratase Ecs Escherichia coli
           O157:H7
          Length = 269

 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 106/243 (43%), Gaps = 30/243 (12%)

Query: 21  SVEDAYEIAHNIRNIRVAQGEQPIGRKIGFVVRKNWERYGIIDDARIPTWAPMYDTTVRF 80
           + E AY I H      VAQG + +GRK+G    K  ++ G+          P + T   F
Sbjct: 34  NAEAAYAIQHINVQYDVAQGRRVVGRKVGLTHPKVQQQLGVDQ--------PDFGTL--F 83

Query: 81  AEDNHGLQSL---TGAVQPRIEPEIVFKLGKT-PAPDASLEELADCLEWMAHGFEIVVCP 136
           A+  +G   +   +  +QPRIE EI   L +  PA D + +EL + +EW+    E+V   
Sbjct: 84  ADMCYGDNEIIPFSRVLQPRIEAEIALVLNRDLPATDITFDELYNAIEWVLPALEVVGSR 143

Query: 137 FPKWEFTVADSIAAFGLHGTLIVGEPHVLSSASRHHLPQILASASVSLSCSTESASVLRA 196
              W     D++A     G  ++  P     A R   P  L   + ++  +  +  V  +
Sbjct: 144 IRDWSIQFVDTVADNASCGVYVIAGP-----AQR---PAGLDLKNCAMKMTRNNEEV--S 193

Query: 197 AGFCNDEMDSPLH-ALWHLHQLLQKQTRFRK-LQAGEIITTGTWTDACPIEPGQTWTTAF 254
           +G  ++ +  PL+ A+W    L +K     + L+AG+II TG       +  G  +    
Sbjct: 194 SGRGSECLGHPLNAAVW----LARKMASLGEPLRAGDIILTGALGPMVAVNAGDRFEAHI 249

Query: 255 SGV 257
            G+
Sbjct: 250 EGI 252


>mhpD [Q] COG3971 2-keto-4-pentenoate hydratase Eco Escherichia coli K12
          Length = 271

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 106/243 (43%), Gaps = 30/243 (12%)

Query: 21  SVEDAYEIAHNIRNIRVAQGEQPIGRKIGFVVRKNWERYGIIDDARIPTWAPMYDTTVRF 80
           + E AY I H      VAQG + +GRK+G    K  ++ G+          P + T   F
Sbjct: 36  NAEAAYAIQHINVQHDVAQGRRVVGRKVGLTHPKVQQQLGVDQ--------PDFGTL--F 85

Query: 81  AEDNHGLQSL---TGAVQPRIEPEIVFKLGKT-PAPDASLEELADCLEWMAHGFEIVVCP 136
           A+  +G   +   +  +QPRIE EI   L +  PA D + +EL + +EW+    E+V   
Sbjct: 86  ADMCYGDNEIIPFSRVLQPRIEAEIALVLNRDLPATDITFDELYNAIEWVLPALEVVGSR 145

Query: 137 FPKWEFTVADSIAAFGLHGTLIVGEPHVLSSASRHHLPQILASASVSLSCSTESASVLRA 196
              W     D++A     G  ++G P     A R   P  L   + ++  +  +  V  +
Sbjct: 146 IRDWSIQFVDTVADNASCGVYVIGGP-----AQR---PAGLDLKNCAMKMTRNNEEV--S 195

Query: 197 AGFCNDEMDSPLH-ALWHLHQLLQKQTRFRK-LQAGEIITTGTWTDACPIEPGQTWTTAF 254
           +G  ++ +  PL+ A+W    L +K     + L+ G+II TG       +  G  +    
Sbjct: 196 SGRGSECLGHPLNAAVW----LARKMASLGEPLRTGDIILTGALGPMVAVNAGDRFEAHI 251

Query: 255 SGV 257
            G+
Sbjct: 252 EGI 254