BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0056.p         (154 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2798 [S] COG4731 Uncharacterized protein conserved in bacteri...   150   1e-36
TP0594 [S] COG4731 Uncharacterized protein conserved in bacteria...    61   9e-10

>RSc2798 [S] COG4731 Uncharacterized protein conserved in bacteria Rso
           Ralstonia solanacearum
          Length = 152

 Score =  150 bits (379), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 71/125 (56%), Positives = 96/125 (76%), Gaps = 3/125 (2%)

Query: 31  SPVGLWKSIDDATGKPKALIRISENNGELSGKIEKLFRAPEEDQNPVCQKCEGELKDKPI 90
           SP G WK+IDDATGKPK  ++I E +G  SG++  + +  EED+  VC KC  + KD+PI
Sbjct: 30  SPAGTWKTIDDATGKPKGEVQIVEKDGVFSGRVTNILK--EEDRAKVCTKCTDDRKDQPI 87

Query: 91  IGMTILSGLKKDGD-EYNGGQIIDPANGKVYKSKLSVVDDGQKLNVRGYVGMPMLGRTQT 149
           +G+TIL  LKK GD E+ GG I+DP NGKVY +K+S+ +DG+KLNVRG++G+ +LGRTQT
Sbjct: 88  VGLTILKDLKKTGDNEWAGGNILDPENGKVYSAKMSLSEDGRKLNVRGFLGISLLGRTQT 147

Query: 150 WLREQ 154
           W+REQ
Sbjct: 148 WVREQ 152


>TP0594 [S] COG4731 Uncharacterized protein conserved in bacteria Tpa
           Treponema pallidum
          Length = 202

 Score = 60.8 bits (146), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 16/114 (14%)

Query: 34  GLWKSIDDATGKPKALIRISENNGELSGKIEKLF-RAPEEDQNPVCQKC---------EG 83
           G+WKS+DD TGKP  + R+   +G+L GKI     RAP    N     C         +G
Sbjct: 65  GIWKSVDDNTGKPTGVWRLYVQDGKLFGKILVCMGRAP----NAAVVSCTRTYPDFSKKG 120

Query: 84  ELKDKPIIGMTILSGLKKDG-DEYNGGQIIDPANGKVYKSKLSVVD-DGQKLNV 135
            + + P++G   +  L++     + GG +IDPA+GK Y  K++ +  DG+   V
Sbjct: 121 NVANMPLVGTPFIYNLERTSPGSWGGGYVIDPASGKYYYCKINFIPADGRSYKV 174