BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0031.p (372 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2140 [G] COG3839 ABC-type sugar transport systems, ATPase com... 343 4e-94 AGl3396 [G] COG3839 ABC-type sugar transport systems, ATPase com... 280 3e-75 YPO3712 [G] COG3839 ABC-type sugar transport systems, ATPase com... 280 4e-75 VCA0946 [G] COG3839 ABC-type sugar transport systems, ATPase com... 278 2e-74 malK [G] COG3839 ABC-type sugar transport systems, ATPase compon... 275 1e-73 ZmalK [G] COG3839 ABC-type sugar transport systems, ATPase compo... 275 1e-73 ECs5018 [G] COG3839 ABC-type sugar transport systems, ATPase com... 275 1e-73 SMc04140 [G] COG3839 ABC-type sugar transport systems, ATPase co... 274 2e-73 STM4230 [G] COG3839 ABC-type sugar transport systems, ATPase com... 274 2e-73 BH1140 [G] COG3839 ABC-type sugar transport systems, ATPase comp... 273 4e-73 >RSc2140 [G] COG3839 ABC-type sugar transport systems, ATPase components Rso Ralstonia solanacearum Length = 369 Score = 343 bits (880), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 157/194 (80%), Positives = 179/194 (92%) Query: 1 MAAVSIRNLAKRYDDNEVMRDINLEIEDGEFVVFVGPSGCGKSTLLRMIAGLEEISDGDL 60 MA+V +RN+AKRYD+NEV+ ++NLEI DGEFVVFVGPSGCGKSTL+RMIAGLE+IS GDL Sbjct: 1 MASVLLRNIAKRYDNNEVLHNVNLEIADGEFVVFVGPSGCGKSTLMRMIAGLEDISSGDL 60 Query: 61 DIGARRMNEVPAAKRGVAMVFQSYALYPHMSLYDNMAFGLKIAGKSKAEIDAAVQHAAKI 120 I ++N+VP+AKRG+AMVFQSYALYPHM+LYDNMAFGLK+AG KAEID AV+ AAKI Sbjct: 61 LIDGAKVNDVPSAKRGIAMVFQSYALYPHMTLYDNMAFGLKLAGAKKAEIDQAVKGAAKI 120 Query: 121 LHIDHLLDRKPRALSGGQRQRVAIGRAITRQPSVFLFDEPLSNLDAALRVKMRLEFAKLH 180 LHIDHLLDRKP+ LSGGQRQRVAIGRAITR+P VFLFDEPLSNLDAALRVKMRLEFA+LH Sbjct: 121 LHIDHLLDRKPKQLSGGQRQRVAIGRAITRKPKVFLFDEPLSNLDAALRVKMRLEFARLH 180 Query: 181 DDLKTTMIYVTHDR 194 +LKTTMIYVTHD+ Sbjct: 181 GELKTTMIYVTHDQ 194 >AGl3396 [G] COG3839 ABC-type sugar transport systems, ATPase components Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 367 Score = 280 bits (717), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 131/193 (67%), Positives = 157/193 (81%) Query: 2 AAVSIRNLAKRYDDNEVMRDINLEIEDGEFVVFVGPSGCGKSTLLRMIAGLEEISDGDLD 61 +++++ + KR+ V+ I+L+IE GEF VFVGPSGCGKSTLLRMIAGLEEIS+GDL Sbjct: 13 SSITLEKIVKRFGAFPVVHGIDLKIEPGEFTVFVGPSGCGKSTLLRMIAGLEEISEGDLR 72 Query: 62 IGARRMNEVPAAKRGVAMVFQSYALYPHMSLYDNMAFGLKIAGKSKAEIDAAVQHAAKIL 121 I R+NE A+KRG+AMVFQSYALYPHMS+Y N+AFGL+ AG K E++A VQ AA IL Sbjct: 73 IDGERVNETAASKRGIAMVFQSYALYPHMSVYKNLAFGLETAGYKKPEVEARVQKAADIL 132 Query: 122 HIDHLLDRKPRALSGGQRQRVAIGRAITRQPSVFLFDEPLSNLDAALRVKMRLEFAKLHD 181 I LL RKP+ALSGGQRQRVAIGRAI R+P +FLFDEPLSNLDA LRV+MR+E AKLH Sbjct: 133 QIGPLLQRKPKALSGGQRQRVAIGRAIVREPKIFLFDEPLSNLDAELRVQMRVEIAKLHQ 192 Query: 182 DLKTTMIYVTHDR 194 L +TMIYVTHD+ Sbjct: 193 TLGSTMIYVTHDQ 205 >YPO3712 [G] COG3839 ABC-type sugar transport systems, ATPase components Ype Yersinia pestis Length = 369 Score = 280 bits (716), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 128/196 (65%), Positives = 162/196 (82%) Query: 1 MAAVSIRNLAKRYDDNEVMRDINLEIEDGEFVVFVGPSGCGKSTLLRMIAGLEEISDGDL 60 MA V++ ++ K + + + RDINLEI+DGEFVVFVGPSGCGKSTLLRMIAGLE+I+ G+L Sbjct: 1 MANVTLSSVYKAFGEAVISRDINLEIDDGEFVVFVGPSGCGKSTLLRMIAGLEDITSGEL 60 Query: 61 DIGARRMNEVPAAKRGVAMVFQSYALYPHMSLYDNMAFGLKIAGKSKAEIDAAVQHAAKI 120 IG +RMNEVP ++RG+ MVFQSYALYPH+S+ +NM+FGLK+AG KAEI V A++ Sbjct: 61 LIGGKRMNEVPPSERGIGMVFQSYALYPHLSVAENMSFGLKLAGVKKAEIYQRVNQVAEV 120 Query: 121 LHIDHLLDRKPRALSGGQRQRVAIGRAITRQPSVFLFDEPLSNLDAALRVKMRLEFAKLH 180 L + HLLDR+P+ALSGGQRQRVAIGR + +P VFL DEPLSNLDAALRV+MR+E ++LH Sbjct: 121 LQLAHLLDRRPKALSGGQRQRVAIGRTLVSEPDVFLLDEPLSNLDAALRVQMRIEISRLH 180 Query: 181 DDLKTTMIYVTHDRSK 196 L+ TMIYVTHD+ + Sbjct: 181 KRLERTMIYVTHDQVE 196 >VCA0946 [G] COG3839 ABC-type sugar transport systems, ATPase components Vch Vibrio cholerae Length = 373 Score = 278 bits (710), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 129/194 (66%), Positives = 160/194 (82%) Query: 1 MAAVSIRNLAKRYDDNEVMRDINLEIEDGEFVVFVGPSGCGKSTLLRMIAGLEEISDGDL 60 MA+V+++N+ K Y D + ++++LEI++GEFVVFVGPSGCGKSTLLR IAGLE+I+ GDL Sbjct: 1 MASVTLKNVCKAYGDVLISKNVDLEIQEGEFVVFVGPSGCGKSTLLRCIAGLEDITSGDL 60 Query: 61 DIGARRMNEVPAAKRGVAMVFQSYALYPHMSLYDNMAFGLKIAGKSKAEIDAAVQHAAKI 120 IG +RMN+V +KRGV MVFQSYALYPH++LYDNM+FGLK++ K+EI V HAA+I Sbjct: 61 YIGEQRMNDVEPSKRGVGMVFQSYALYPHLNLYDNMSFGLKLSKADKSEIKKRVDHAAEI 120 Query: 121 LHIDHLLDRKPRALSGGQRQRVAIGRAITRQPSVFLFDEPLSNLDAALRVKMRLEFAKLH 180 L + HLLDR+P+ALSGGQRQRVAIGR + QP+VFL DEPLSNLDAALRV+MR E KL Sbjct: 121 LQLSHLLDRQPKALSGGQRQRVAIGRTLVSQPNVFLLDEPLSNLDAALRVQMRSEITKLQ 180 Query: 181 DDLKTTMIYVTHDR 194 L TMIYVTHD+ Sbjct: 181 RKLGCTMIYVTHDQ 194 >malK [G] COG3839 ABC-type sugar transport systems, ATPase components Eco Escherichia coli K12 Length = 371 Score = 275 bits (703), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 128/196 (65%), Positives = 159/196 (81%) Query: 1 MAAVSIRNLAKRYDDNEVMRDINLEIEDGEFVVFVGPSGCGKSTLLRMIAGLEEISDGDL 60 MA+V ++N+ K + + V +DINL+I +GEFVVFVGPSGCGKSTLLRMIAGLE I+ GDL Sbjct: 1 MASVQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDL 60 Query: 61 DIGARRMNEVPAAKRGVAMVFQSYALYPHMSLYDNMAFGLKIAGKSKAEIDAAVQHAAKI 120 IG +RMN+ P A+RGV MVFQSYALYPH+S+ +NM+FGLK+AG K I+ V A++ Sbjct: 61 FIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEV 120 Query: 121 LHIDHLLDRKPRALSGGQRQRVAIGRAITRQPSVFLFDEPLSNLDAALRVKMRLEFAKLH 180 L + HLLDRKP+ALSGGQRQRVAIGR + +PSVFL DEPLSNLDAALRV+MR+E ++LH Sbjct: 121 LQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLH 180 Query: 181 DDLKTTMIYVTHDRSK 196 L TMIYVTHD+ + Sbjct: 181 KRLGRTMIYVTHDQVE 196 >ZmalK [G] COG3839 ABC-type sugar transport systems, ATPase components EcZ Escherichia coli O157:H7 EDL933 Length = 371 Score = 275 bits (703), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 128/196 (65%), Positives = 159/196 (81%) Query: 1 MAAVSIRNLAKRYDDNEVMRDINLEIEDGEFVVFVGPSGCGKSTLLRMIAGLEEISDGDL 60 MA+V ++N+ K + + V +DINL+I +GEFVVFVGPSGCGKSTLLRMIAGLE I+ GDL Sbjct: 1 MASVQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDL 60 Query: 61 DIGARRMNEVPAAKRGVAMVFQSYALYPHMSLYDNMAFGLKIAGKSKAEIDAAVQHAAKI 120 IG +RMN+ P A+RGV MVFQSYALYPH+S+ +NM+FGLK+AG K I+ V A++ Sbjct: 61 FIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEV 120 Query: 121 LHIDHLLDRKPRALSGGQRQRVAIGRAITRQPSVFLFDEPLSNLDAALRVKMRLEFAKLH 180 L + HLLDRKP+ALSGGQRQRVAIGR + +PSVFL DEPLSNLDAALRV+MR+E ++LH Sbjct: 121 LQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLH 180 Query: 181 DDLKTTMIYVTHDRSK 196 L TMIYVTHD+ + Sbjct: 181 KRLGRTMIYVTHDQVE 196 >ECs5018 [G] COG3839 ABC-type sugar transport systems, ATPase components Ecs Escherichia coli O157:H7 Length = 371 Score = 275 bits (703), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 128/196 (65%), Positives = 159/196 (81%) Query: 1 MAAVSIRNLAKRYDDNEVMRDINLEIEDGEFVVFVGPSGCGKSTLLRMIAGLEEISDGDL 60 MA+V ++N+ K + + V +DINL+I +GEFVVFVGPSGCGKSTLLRMIAGLE I+ GDL Sbjct: 1 MASVQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDL 60 Query: 61 DIGARRMNEVPAAKRGVAMVFQSYALYPHMSLYDNMAFGLKIAGKSKAEIDAAVQHAAKI 120 IG +RMN+ P A+RGV MVFQSYALYPH+S+ +NM+FGLK+AG K I+ V A++ Sbjct: 61 FIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEV 120 Query: 121 LHIDHLLDRKPRALSGGQRQRVAIGRAITRQPSVFLFDEPLSNLDAALRVKMRLEFAKLH 180 L + HLLDRKP+ALSGGQRQRVAIGR + +PSVFL DEPLSNLDAALRV+MR+E ++LH Sbjct: 121 LQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLH 180 Query: 181 DDLKTTMIYVTHDRSK 196 L TMIYVTHD+ + Sbjct: 181 KRLGRTMIYVTHDQVE 196 >SMc04140 [G] COG3839 ABC-type sugar transport systems, ATPase components Sme Sinorhizobium meliloti Length = 360 Score = 274 bits (701), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 131/194 (67%), Positives = 159/194 (81%) Query: 3 AVSIRNLAKRYDDNEVMRDINLEIEDGEFVVFVGPSGCGKSTLLRMIAGLEEISDGDLDI 62 +V ++ + KRY +V+ I+L I+ GEF VFVGPSGCGKSTLLRMIAGLEEIS G L + Sbjct: 4 SVVLQKVEKRYGALDVIHGIDLTIDPGEFAVFVGPSGCGKSTLLRMIAGLEEISGGTLML 63 Query: 63 GARRMNEVPAAKRGVAMVFQSYALYPHMSLYDNMAFGLKIAGKSKAEIDAAVQHAAKILH 122 + RMNEV A+RG+AMVFQSYALYPHMS+Y N+AFGL+ AG KAEI+ V+ AA+IL Sbjct: 64 DSDRMNEVAPARRGIAMVFQSYALYPHMSVYKNLAFGLETAGFKKAEIEPKVRRAAEILQ 123 Query: 123 IDHLLDRKPRALSGGQRQRVAIGRAITRQPSVFLFDEPLSNLDAALRVKMRLEFAKLHDD 182 I+ LLDRKP+ALSGGQRQRVAIGRAI R+P +FLFDEPLSNLDA LRV+MR+E ++LH D Sbjct: 124 IEKLLDRKPKALSGGQRQRVAIGRAIVREPRIFLFDEPLSNLDAELRVQMRVEISRLHRD 183 Query: 183 LKTTMIYVTHDRSK 196 L TMIYVTHD+ + Sbjct: 184 LGNTMIYVTHDQVE 197 >STM4230 [G] COG3839 ABC-type sugar transport systems, ATPase components Sty Salmonella typhimurium LT2 Length = 369 Score = 274 bits (701), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 128/196 (65%), Positives = 158/196 (80%) Query: 1 MAAVSIRNLAKRYDDNEVMRDINLEIEDGEFVVFVGPSGCGKSTLLRMIAGLEEISDGDL 60 MA+V +RN+ K + D V +DINL+I DGEFVVFVGPSGCGKSTLLRMIAGLE I+ GDL Sbjct: 1 MASVQLRNVTKAWGDVVVSKDINLDIHDGEFVVFVGPSGCGKSTLLRMIAGLETITSGDL 60 Query: 61 DIGARRMNEVPAAKRGVAMVFQSYALYPHMSLYDNMAFGLKIAGKSKAEIDAAVQHAAKI 120 IG RMN++P A+RGV MVFQSYALYPH+S+ +NM+FGLK+AG K ++ V A++ Sbjct: 61 FIGETRMNDIPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVMNQRVNQVAEV 120 Query: 121 LHIDHLLDRKPRALSGGQRQRVAIGRAITRQPSVFLFDEPLSNLDAALRVKMRLEFAKLH 180 L + HLL+RKP+ALSGGQRQRVAIGR + +P VFL DEPLSNLDAALRV+MR+E ++LH Sbjct: 121 LQLAHLLERKPKALSGGQRQRVAIGRTLVAEPRVFLLDEPLSNLDAALRVQMRIEISRLH 180 Query: 181 DDLKTTMIYVTHDRSK 196 L TMIYVTHD+ + Sbjct: 181 KRLGRTMIYVTHDQVE 196 >BH1140 [G] COG3839 ABC-type sugar transport systems, ATPase components Bha Bacillus halodurans Length = 365 Score = 273 bits (699), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 130/204 (63%), Positives = 160/204 (78%), Gaps = 1/204 (0%) Query: 1 MAAVSIRNLAKRYD-DNEVMRDINLEIEDGEFVVFVGPSGCGKSTLLRMIAGLEEISDGD 59 MA + ++N+ K YD D + + D NL+I+D EF+VFVGPSGCGKST LRMIAGLE+IS GD Sbjct: 1 MAEIQLKNVYKIYDGDVQAVTDFNLDIKDKEFIVFVGPSGCGKSTTLRMIAGLEDISKGD 60 Query: 60 LDIGARRMNEVPAAKRGVAMVFQSYALYPHMSLYDNMAFGLKIAGKSKAEIDAAVQHAAK 119 L IG +RMN+V R +AMVFQ+YALYPHM++YDNMAFGLK+ K EID V++AAK Sbjct: 61 LLIGGKRMNDVAPKDRDIAMVFQNYALYPHMNVYDNMAFGLKLRKFKKDEIDKRVKNAAK 120 Query: 120 ILHIDHLLDRKPRALSGGQRQRVAIGRAITRQPSVFLFDEPLSNLDAALRVKMRLEFAKL 179 IL ++ +LDRKP+A+SGGQRQRVA+GRAI R P VFL DEPLSNLDA LRV+MR E KL Sbjct: 121 ILGLEEMLDRKPKAMSGGQRQRVALGRAIVRDPQVFLMDEPLSNLDAKLRVQMRAEITKL 180 Query: 180 HDDLKTTMIYVTHDRSKP*PWPTR 203 H L+TT IYVTHD+++ TR Sbjct: 181 HQRLQTTTIYVTHDQTEAMTMATR 204