BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0013.p (267 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll1292 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 280 2e-75 CC2635 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 181 1e-45 AGc1933 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 144 3e-34 mlr6798 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 133 5e-31 mll8571 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 129 1e-29 DR0511_2 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate tran... 125 8e-29 PA3512 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 121 2e-27 SMc01826 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate tran... 120 4e-27 BH2681 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 118 1e-26 TM0485 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 115 8e-26 >mll1292 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Mlo Mesorhizobium loti Length = 282 Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 144/258 (55%), Positives = 195/258 (75%), Gaps = 2/258 (0%) Query: 9 VNRPGFWRVAAPLIIGIALLLMWQIVCTLLEVPPYLVPTPALIVKTLAADWSMLMASLLV 68 + R G W PL I I + +W +C E+P Y++P P ++++TL D +L +SLLV Sbjct: 23 LERVGRW--VLPLAIMILAIWLWDRICVWDEIPQYILPRPGVVLQTLYNDAGLLFSSLLV 80 Query: 69 TLKITFLAFALAVVLGVAIAFVFVQSRFIEISLFPYAIILQVTPIVAIAPLIIIWVKDTT 128 TL+ITFL+ ALAV+ GV ++ +F QS+++E+S FP+AI+LQVTPIVAI PLI I+V + T Sbjct: 81 TLRITFLSLALAVIGGVGLSVLFAQSKWVEMSFFPFAIVLQVTPIVAIFPLINIYVNNQT 140 Query: 129 AALTVCATIMALFPIISNTTLGLRSVNPGLLNLFRLNKATRWQTLRRLRIPSALPYFFGG 188 L +CA I+A FPI+SNTTLGL SV+ L +LF+LN ATRWQ LR LR+P+A+PYF GG Sbjct: 141 TKLLLCAWIVAFFPILSNTTLGLNSVDRNLRDLFKLNGATRWQQLRYLRLPAAMPYFLGG 200 Query: 189 LRISSGLALIGAVVAEFVAGTGGTGSGLAYQILQAGFQLNIPRLFAALLLITLTGILLFW 248 L+I+ GL+LIGAVVAEFVAG G SGLA +I++AG++LN PRLFAAL LI+LTGIL+F Sbjct: 201 LKIAGGLSLIGAVVAEFVAGATGQSSGLASRIIEAGYRLNAPRLFAALFLISLTGILIFL 260 Query: 249 LMSALSRAMLAGWHESEM 266 ++S +S +L WHES + Sbjct: 261 VLSLISHLILRRWHESAL 278 >CC2635 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Ccr Caulobacter vibrioides Length = 252 Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 108/249 (43%), Positives = 154/249 (61%), Gaps = 3/249 (1%) Query: 16 RVAAPLIIGIALLLMWQIVCTLLEVPPYLVPTPALIVKTLAADWSMLMASLLVTLKITFL 75 R+ APLI+ ALL W++ C L VP YL+P P+ I + A W +L+ S TL L Sbjct: 3 RILAPLILIAALLAGWELACKALAVPAYLLPPPSAIWEAFVASWPLLLGSAWATLSTALL 62 Query: 76 AFALAVVLGVAIAFVFVQSRFIEISLFPYAIILQVTPIVAIAPLIIIW--VKDTTAALTV 133 A +A ++ +A + + F+E ++ P A+ LQVTP+VAIAPL+ IW + A+ Sbjct: 63 ALIIASLIACGLALLVSLNGFLEDAVRPIAVTLQVTPLVAIAPLVTIWAGIDHPERAVIG 122 Query: 134 CATIMALFPIISNTTLGLRSVNPGLLNLFRLNKATRWQTLRRLRIPSALPYFFGGLRISS 193 A ++A FPI S GL+SV+P L LF L AT Q L RLR+PSA+P G ++++ Sbjct: 123 LAAVVAFFPIFSGALSGLKSVDPDLARLFDLYGATPLQRLVRLRLPSAVPALLEGHKVAA 182 Query: 194 GLALIGAVVAEFVAGTGGTGSGLAYQILQAGFQLNIPRLFAALLLITLTGILLFWLMSAL 253 GLA+IGAVVAEFVAG+GG GLA++IL++ +L ++FAAL + L G++L M AL Sbjct: 183 GLAVIGAVVAEFVAGSGGA-QGLAWRILESYNRLQTAKVFAALFTLALLGVVLHAAMEAL 241 Query: 254 SRAMLAGWH 262 R +L W Sbjct: 242 ERRLLNFWR 250 >AGc1933 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 272 Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 88/263 (33%), Positives = 146/263 (55%), Gaps = 7/263 (2%) Query: 6 DPLVNRPGFWRVAAPLIIGIALLLMWQIVCTLLEVPPYLVPTPALIVKTLAADWSMLMAS 65 PL+ R W AAP + +AL +W+++ L++PP ++P+P + + + WS + + Sbjct: 15 KPLIERVN-WVKAAPWLYTLALFALWELLVYALKMPPTILPSPIRVGQVIVQYWSPIWKN 73 Query: 66 LLVTLKITFLAFALAVVLGVAIAFVFVQSRFIEISLFPYAIILQVTPIVAIAPLIIIWVK 125 L TL T L FA+AV G+AI S+ I L+P I P VA+ P+++IW Sbjct: 74 SLQTLYTTTLGFAIAVAAGLAIGLFIGWSKTIYAGLYPLMIGFNAIPKVALVPILVIWFG 133 Query: 126 DTTAALTVCATIMALFPIISNTTLGLRSVNPGLLNLFRLNKATRWQTLRRLRIPSALPYF 185 T + A +++ FPI+ N GL ++ P ++ R A + + ++ IP ++PYF Sbjct: 134 IGTVPAVLTAFLISFFPIVVNVATGLATIEPETEDVLRALGAKKMDIMLKVGIPRSMPYF 193 Query: 186 FGGLRISSGLALIGAVVAEFVAGTGGTGSGLAYQILQAGFQLNIPRLFAALLLITLTGIL 245 FG L+I+ LA +G+VV+E VA G G+ ++ A Q N+P +FA LL++ + GI Sbjct: 194 FGSLKIAITLAFVGSVVSETVASNYGLGNMMS----SAQSQFNVPLVFAGLLMLAVEGIA 249 Query: 246 LFWLMSALSRAMLAGW-HESEMA 267 ++ +M+ L + M GW H S M Sbjct: 250 MYAVMAWLEKRM-TGWAHRSTMG 271 >mlr6798 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Mlo Mesorhizobium loti Length = 275 Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 78/228 (34%), Positives = 130/228 (57%), Gaps = 4/228 (1%) Query: 28 LLMWQIVCTLLEVPPYLVPTPALIVKTLAADWSMLMASLLVTLKITFLAFALAVVLGVAI 87 +++W+ V + + +++P P+ I ++L A W LM + LVT F ++VV+G+AI Sbjct: 40 IVVWEAVVRIFAISAFIIPAPSEIAQSLVAQWGTLMQATLVTAGEILFGFLVSVVVGIAI 99 Query: 88 AFVFVQSRFIEISLFPYAIILQVTPIVAIAPLIIIWVKDTTAALTVCATIMALFPIISNT 147 A V V+ ++ +L+P ++ Q P VA+AP+ I+W A ++A FP+ + Sbjct: 100 ALVIVRFDWLGRALYPLVVLFQNVPKVALAPIFILWFGYGLAPKIGLILVIAFFPVTLSM 159 Query: 148 TLGLRSVNPGLLNLFRLNKATRWQTLRRLRIPSALPYFFGGLRISSGLALIGAVVAEFVA 207 G++SV+ LL+L A+R Q L R+R+P +LP G +I++ L++IGA+V EF Sbjct: 160 LAGMQSVDRSLLSLMNSVGASRTQILFRIRVPHSLPNLMAGTKIAATLSVIGAIVGEF-- 217 Query: 208 GTGGTGSGLAYQILQAGFQLNIPRLFAALLLITLTGILLFWLMSALSR 255 G GL Y I A QL+ +FAALLL+++ GI ++ L R Sbjct: 218 --AGASDGLGYVIQFASTQLDTALVFAALLLVSVLGIAFYYAAEILER 263 >mll8571 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Mlo Mesorhizobium loti Length = 251 Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 83/239 (34%), Positives = 128/239 (53%), Gaps = 4/239 (1%) Query: 17 VAAPLIIGIALLLMWQIVCTLLEVPPYLVPTPALIVKTLAADWSMLMASLLVTLKITFLA 76 +A P+ +LLL WQ + LL VP Y+VPTP I ++++LM +L TL Sbjct: 12 IALPVFGAASLLLAWQYLLPLLGVPAYIVPTPTAISGVFQRNFALLMDNLRPTLIEALAG 71 Query: 77 FALAVVLGVAIAFVFVQSRFIEISLFPYAIILQVTPIVAIAPLIIIWVKDTTAALTVCAT 136 F + + V +A +FV +R ++ + FP + PI+A++P+II+ V A Sbjct: 72 FVIGNLAAVLLAVLFVHNRILQATYFPIVLFFNTIPILALSPIIILIFGLGMTPKIVIAA 131 Query: 137 IMALFPIISNTTLGLRSVNPGLLNLFRLNKATRWQTLRRLRIPSALPYFFGGLRISSGLA 196 ++ FP + N GL S + LFR+ ATR + LR+P ALP F LRI+S A Sbjct: 132 VICFFPTLVNMIRGLDSASDNEHELFRVLSATRAEIFWSLRLPRALPMLFSSLRIASATA 191 Query: 197 LIGAVVAEFVAGTGGTGSGLAYQILQAGFQLNIPRLFAALLLITLTGILLFWLMSALSR 255 +IGA+V E++ G+ GL I+QA F RL+AA++L + I+LF + + R Sbjct: 192 VIGAIVGEWI----GSDKGLGALIIQASFNYQSDRLYAAIVLSSCLSIVLFCAVVLVER 246 >DR0511_2 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Dra Deinococcus radiodurans Length = 305 Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 81/227 (35%), Positives = 128/227 (56%), Gaps = 4/227 (1%) Query: 29 LMWQIVCTLLEVPPYLVPTPALIVKTLAADWSMLMASLLVTLKITFLAFALAVVLGVAIA 88 + WQ+ L P+L+P PA + L + L ASL VT + L L + G+ + Sbjct: 75 IAWQVAAVRL-AQPFLLPAPAAVWAKLTGNAPTLFASLWVTARTALLGTLLGGLGGLLLG 133 Query: 89 FVFVQSRFIEISLFPYAIILQVTPIVAIAPLIIIWVKDTTAALTVCATIMALFPIISNTT 148 + +SR +E L P+ + Q TPIV +APL++ W+ + + + + AL+P++ +T Sbjct: 134 YPIAKSRALERFLSPFIVASQSTPIVVLAPLLVSWLGFGSLPAVLVSALSALYPVLVSTL 193 Query: 149 LGLRSVNPGLLNLFRLNKATRWQTLRRLRIPSALPYFFGGLRISSGLALIGAVVAEFVAG 208 +G+R V+ LF +AT WQ L RL +P ALP GGLR+++ LALIGAVV EF Sbjct: 194 IGVREVDHAYHELFHSLRATPWQRLTRLELPGALPVMLGGLRLAASLALIGAVVWEF--- 250 Query: 209 TGGTGSGLAYQILQAGFQLNIPRLFAALLLITLTGILLFWLMSALSR 255 T GL +++ +AG + FAA+ L+ + G+LL+ ++AL R Sbjct: 251 TDPNQKGLGFRVQEAGIYQDKAGQFAAIALLIVFGVLLYGAVTALER 297 >PA3512 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Pae Pseudomonas aeruginosa Length = 258 Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 76/220 (34%), Positives = 120/220 (54%), Gaps = 8/220 (3%) Query: 31 WQIVCTLLEVPPYLVPTPALIVKTLAADWS---MLMASLLVTLKITFLAFALAVVLGVAI 87 WQ LL +P +++P + + A W +L + + +L+I + FAL +LGV+I Sbjct: 22 WQWGPGLLGMPEFVLPGLSRVAAEGVAMWHGAGLLEHTAITSLEIV-VGFALGALLGVSI 80 Query: 88 AFVFVQSRFIEISLFPYAIILQVTPIVAIAPLIIIWVKDTTAALTVCATIMALFPIISNT 147 S E L PY + LQ+ P VA APL ++W+ T + A ++ FP++ N Sbjct: 81 GVALGLSPTTEAMLSPYILALQIAPKVAFAPLFVMWLGYTVYPKILIAVLIVFFPVMINV 140 Query: 148 TLGLRSVNPGLLNLFRLNKATRWQTLRRLRIPSALPYFFGGLRISSGLALIGAVVAEFVA 207 +R+V+P ++NL R A+RWQ R + PSA+ F GLRI+S LA+IG V E V Sbjct: 141 LSAIRTVDPDMINLVRAMSASRWQIFRLVEFPSAMAALFSGLRIASTLAVIGVTVGELVG 200 Query: 208 GTGGTGSGLAYQILQAGFQLNIPRLFAALLLITLTGILLF 247 G GL + ++ A Q N +F A++++TL G+L + Sbjct: 201 GN----KGLGFLLVDAEGQGNTAGVFVAIVMLTLIGVLAY 236 >SMc01826 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Sme Sinorhizobium meliloti Length = 289 Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 76/246 (30%), Positives = 132/246 (53%), Gaps = 5/246 (2%) Query: 20 PLIIGIALLLMWQIVCTLLEVPPYLVPTPALIVKTLAADWSMLMASLLVT-LKITFLAFA 78 PL+ GI +L++W+ + VP L+P P++I + L L A T LK +A Sbjct: 42 PLLFGITILVLWEGIVRGFAVPSVLLPAPSMIWQRLINSLPTLAADFRQTFLKSVLTGYA 101 Query: 79 LAVVLGVAIAFVFVQSRFIEISLFPYAIILQVTPIVAIAPLIIIWVKDTTAALTVCATIM 138 L LG +A + +S F++ L P + P++ +AP++++W + IM Sbjct: 102 LGCGLGFVVAILIDRSPFLQKGLLPLGNFVSALPVIGVAPIMVMWFGFDWQSKVAVVVIM 161 Query: 139 ALFPIISNTTLGLRSVNPGLLNLFRLNKATRWQTLRRLRIPSALPYFFGGLRISSGLALI 198 FP++ NT GL + + +L R A+ WQTL +LR+P+A P+ F L+I+S LALI Sbjct: 162 TFFPMLVNTVSGLAAASHMERDLMRTYAASWWQTLVKLRLPAAWPFIFNALKINSTLALI 221 Query: 199 GAVVAEFVAGTGGTGSGLAYQILQAGFQLNIPRLFAALLLITLTGILLFWLMSALSRAML 258 GA+VAEF G G+ ++I ++N+ ++A + + + G + + +++ + RA + Sbjct: 222 GAIVAEFF---GTPIVGMGFRISTEVGRMNVDMVWAEIAVAAVAGSVFYGMVALIERA-V 277 Query: 259 AGWHES 264 WH S Sbjct: 278 TFWHPS 283 >BH2681 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Bha Bacillus halodurans Length = 250 Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 78/252 (30%), Positives = 134/252 (53%), Gaps = 7/252 (2%) Query: 15 WRVAAPLIIGIALLLMWQIVCTLLEVPPYLVPTPALIV-KTLAADWSMLMASLLVTLKIT 73 ++ P + + L+++W+I ++ PYL+P+P IV +T+ S+ L TL I Sbjct: 5 YQALEPTLFFLMLMVIWEISARMIG-QPYLLPSPIQIVMRTIDLSESLFFTHLPATLAII 63 Query: 74 FLAFALAVVLGVAIAFVFVQSRFIEISLFPYAIILQVTPIVAIAPLIIIWVKDTTAALTV 133 + AL++VLG+ ++ + + +E +++P + Q P++A+AP+ ++W + + Sbjct: 64 SIGLALSIVLGILLSLLMFWNERVERAVYPLLVASQTIPVIALAPIFVLWFGYSIWSKVA 123 Query: 134 CATIMALFPIISNTTLGLRSVNPGLLNLFRLNKATRWQTLRRLRIPSALPYFFGGLRISS 193 ++ FPI NT GL+S N LF AT+ Q RL +PS LP F GLRI+ Sbjct: 124 VTVLLTFFPITVNTYDGLKSTNRQYEELFYTMGATKRQLFYRLFVPSTLPSFLTGLRIAV 183 Query: 194 GLALIGAVVAEFVAGTGGTGSGLAYQILQAGFQLNIPRLFAALLLITLTGILLFWLMSAL 253 LA+IGA V E++ G GL Y + Q + P +FA + +++L GIL F + L Sbjct: 184 PLAVIGAAVGEWL----GANEGLGYFSRRMMTQFDGPGVFAPIFILSLLGILGFAAIKKL 239 Query: 254 SRAMLAGWHESE 265 +L W + + Sbjct: 240 ENILLP-WRKKQ 250 >TM0485 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Tma Thermotoga maritima Length = 250 Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 69/199 (34%), Positives = 108/199 (54%), Gaps = 4/199 (2%) Query: 15 WRVAAPLIIGIALLLMWQIVCTLLEVPPYLVPTPALIVKTLAADWSMLMASLLVTLKITF 74 +R A + IAL+ +W+ +VP YL+P P+ IV + W +LM L T+ F Sbjct: 5 YRSTAKWLFFIALIFVWEFS----KVPQYLLPKPSSIVLEGLSQWKILMDHSLYTILEAF 60 Query: 75 LAFALAVVLGVAIAFVFVQSRFIEISLFPYAIILQVTPIVAIAPLIIIWVKDTTAALTVC 134 + +VLGV +A + + ++ ++P II Q PIVA+APL+IIW Sbjct: 61 SGLVIGLVLGVGLAVLMDLFQTVKEVMYPILIISQAIPIVAVAPLVIIWFGLGVGTKIGI 120 Query: 135 ATIMALFPIISNTTLGLRSVNPGLLNLFRLNKATRWQTLRRLRIPSALPYFFGGLRISSG 194 + LFP+ NT G R+++ L+LF++ KAT+ Q R L +P LPY GL+IS+ Sbjct: 121 VAFVTLFPVALNTLEGFRTIDQDALDLFKVMKATKIQIYRYLVLPHTLPYVLSGLKISAT 180 Query: 195 LALIGAVVAEFVAGTGGTG 213 A++ AV+ E++ G G Sbjct: 181 YAVVSAVIGEWLGAEKGLG 199