BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0001.p         (72 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VC0262 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Vch ...    66   2e-11
PA3146 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Pae ...    59   2e-09

>VC0262 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Vch Vibrio
           cholerae
          Length = 323

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 45/69 (65%)

Query: 1   LGRALDKSPTLLPVPASWLTLAARLMGKKGIAQRLCGSLQVDISKNRELLGWSPPITVDA 60
           + +A+   P LLP+P + L    RL+GK  + QRLCG+LQ+DI+  ++ L WSPP++ + 
Sbjct: 249 IAQAMQIRPRLLPIPQTGLQWLLRLLGKPELGQRLCGNLQLDIAHTQKTLHWSPPVSFEQ 308

Query: 61  AFRKTVDAY 69
              +TV+ Y
Sbjct: 309 GIARTVNFY 317


>PA3146 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Pae
           Pseudomonas aeruginosa
          Length = 316

 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 38/69 (55%)

Query: 1   LGRALDKSPTLLPVPASWLTLAARLMGKKGIAQRLCGSLQVDISKNRELLGWSPPITVDA 60
           L R + + P L   PA  L L   L+GK  + ++LCGSLQVD SK R LLGW P  T+ A
Sbjct: 239 LSRGMGRRPALFTFPAVLLKLVMCLLGKASMHEQLCGSLQVDASKARRLLGWVPVETIGA 298

Query: 61  AFRKTVDAY 69
             +     Y
Sbjct: 299 GLQAAGREY 307