BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0018.0098.p (344 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2097 [O] COG1975 Xanthine and CO dehydrogenases maturation fa... 274 2e-73 PA1522 [O] COG1975 Xanthine and CO dehydrogenases maturation fac... 157 3e-38 CC2617 Non COG 155 1e-37 BMEI1574 [O] COG1975 Xanthine and CO dehydrogenases maturation f... 126 8e-29 SMb21288 [O] COG1975 Xanthine and CO dehydrogenases maturation f... 105 1e-22 AGc4205 [O] COG1975 Xanthine and CO dehydrogenases maturation fa... 104 3e-22 mlr5136 [O] COG1975 Xanthine and CO dehydrogenases maturation fa... 102 1e-21 DRA0179 [O] COG1975 Xanthine and CO dehydrogenases maturation fa... 102 2e-21 yqeB [O] COG1975 Xanthine and CO dehydrogenases maturation facto... 77 4e-14 Z4214 [O] COG1975 Xanthine and CO dehydrogenases maturation fact... 77 4e-14 >RSc2097 [O] COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Rso Ralstonia solanacearum Length = 342 Score = 274 bits (701), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 159/324 (49%), Positives = 194/324 (59%), Gaps = 27/324 (8%) Query: 1 VLVTVAQIQGSTPRAPGARMLYTADTQFDTIGGGHLEWRAAQMARAMLQAPLGQLAGQRR 60 VLVTV +QGS PR PG ML AD F TIGGGHLEWRA +A+AM+ AP +R+ Sbjct: 25 VLVTVVDVQGSAPREPGTLMLVCADAFFGTIGGGHLEWRAMAIAQAMMDAPQASGDARRQ 84 Query: 61 LERVALGPSLGQCCGGVVFLCFERIATDDEAMRTWQAL-EQSWSSGQDLWRAVPLDHAGA 119 R+ LGP+LGQCCGGVV L ER+ D A W A+ +Q+ + + R VP D A Sbjct: 85 YVRIPLGPALGQCCGGVVRLSLERLDARDAA---WLAVADQAMRQRRSVRRFVPADAA-- 139 Query: 120 QLLIEGNIEDLPPDAYAHGLPPDTLGQRRQTRLLRDAQGRRWLLDWCHASRPQVVLFGAG 179 LP DA T+G ++ DA G L S +VL GAG Sbjct: 140 ----------LPVDA--------TIGDAAAAGVVIDANGFTQTLLPPDMS---IVLCGAG 178 Query: 180 HVGQAIVAVLSTLPCRVLWVDAREEMFPPGLPPQIRTEATDVPNAAVDMADPGAYFLVMT 239 HVG AIV L+ LPCRV WVD R+ MFP PP + EATD P A +D A G+YFLVMT Sbjct: 179 HVGHAIVRALAHLPCRVTWVDERDAMFPAEAPPNVAIEATDTPEAVIDAAPAGSYFLVMT 238 Query: 240 HSHALDQQLSERILKRQDLAWFGLIGSLTKRRQFEHRLAERGFSAAQLERITCPIGIDGI 299 H+HALD L ERI++R D A+FGLIGS TKR +FEHR+ G A+L + CPIG+ GI Sbjct: 239 HNHALDLALCERIMRRTDFAYFGLIGSRTKRARFEHRMVAHGVDPARLPEMVCPIGVAGI 298 Query: 300 DGKEPASIAIAVVAQLLQLWEKRQ 323 K P IA++VVAQLLQ+ E Q Sbjct: 299 ADKAPDIIAVSVVAQLLQVRELHQ 322 >PA1522 [O] COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Pae Pseudomonas aeruginosa Length = 279 Score = 157 bits (398), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 71/149 (47%), Positives = 103/149 (69%) Query: 172 QVVLFGAGHVGQAIVAVLSTLPCRVLWVDAREEMFPPGLPPQIRTEATDVPNAAVDMADP 231 + +FGAGHVG+A+V +L++LPCRV W+D+RE FP LP + D V+ P Sbjct: 104 HIAVFGAGHVGRALVPLLASLPCRVRWIDSREHEFPALLPDGVEKVVNDEVLDEVERMPP 163 Query: 232 GAYFLVMTHSHALDQQLSERILKRQDLAWFGLIGSLTKRRQFEHRLAERGFSAAQLERIT 291 G++F+VMTH+H LD +L+ IL R D A+FGLIGS TKR +FEHRL ERG A +L+R+ Sbjct: 164 GSHFIVMTHNHPLDLELTAAILARNDFAYFGLIGSKTKRVKFEHRLRERGVDAERLQRMR 223 Query: 292 CPIGIDGIDGKEPASIAIAVVAQLLQLWE 320 CP+G++ + GK PA IAI++ +++ + Sbjct: 224 CPMGLEQVKGKLPAEIAISIAGEVIATYN 252 Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 4/83 (4%) Query: 1 VLVTVAQIQGSTPRAPGARMLYTADTQFDTIGGGHLEWRAAQMARAMLQAPLGQLAGQRR 60 VLVT+ + +GSTPR G++M+ +A+ +DTIGGGHLE+RA +AR ML A R Sbjct: 18 VLVTIIEERGSTPRNAGSKMVVSAERLYDTIGGGHLEYRAQAIAREMLAA----RTQDTR 73 Query: 61 LERVALGPSLGQCCGGVVFLCFE 83 LER +LG SLGQCCGG L FE Sbjct: 74 LERFSLGASLGQCCGGATVLLFE 96 >CC2617 Non COG Length = 338 Score = 155 bits (393), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 125/341 (36%), Positives = 164/341 (48%), Gaps = 31/341 (9%) Query: 2 LVTVAQIQGSTPRAPGARMLYTADTQFDTIGGGHLEWRAAQMARAMLQAPLGQLAGQRRL 61 LVTV +GS PR G +M+ Q TIGGG+LE+R A AR ML A + Sbjct: 21 LVTVLATEGSAPREAGTKMVVWRAGQAGTIGGGNLEYRVADQARRMLDGGQAHFA----I 76 Query: 62 ERVALGPSLGQCCGGVVFLCFERIATDDEAMRTWQALEQSWSSGQDL-WRAVP--LDHAG 118 + LGP L QCCGG V L ER+ + T A + ++ R P L Sbjct: 77 QDYPLGPLLAQCCGGRVRLFLERLNDNSRDWLTDAAKRMDAAQPFEVRTRFEPGLLTKTI 136 Query: 119 AQLLIEGNIEDLPPDAYAHGLPPDTLGQRRQTRLLRDAQGRRWLLDWCHASRPQVVLFGA 178 A +L + E P G P G R + L D L++ A RP ++LFGA Sbjct: 137 APIL---STEADGPLVSLAGAPATARGARPE---LGDV-----LVERADAPRPPLLLFGA 185 Query: 179 GHVGQAIVAVLSTLPCRVLWVDAREEMFPPG-----LPPQIRTEATDVPNAAVDMADPGA 233 GHVGQAI LP R+ W D+R E G P ++ +A A D A Sbjct: 186 GHVGQAIARAFEPLPFRLSWYDSRPETAEIGGVTVLEPAELAAKAM---GAGAD-----A 237 Query: 234 YFLVMTHSHALDQQLSERILKRQDLAWFGLIGSLTKRRQFEHRLAERGFSAAQLERITCP 293 Y LV+TH HALD L L ++FG+IGS TKR +F RL + GFS A L R+TCP Sbjct: 238 YGLVLTHDHALDYALVSAGLAGGGFSYFGVIGSKTKRARFMKRLRDDGFSEAVLTRLTCP 297 Query: 294 IGIDGIDGKEPASIAIAVVAQLLQLWEKRQATPEQQPSPAV 334 IG+ + K P IA++V A LL E + ++ S +V Sbjct: 298 IGLPHLKSKAPEVIAVSVAADLLMRQEAARIRNDEMSSASV 338 >BMEI1574 [O] COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Bme Brucella melitensis Length = 290 Score = 126 bits (316), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 100/322 (31%), Positives = 134/322 (41%), Gaps = 90/322 (27%) Query: 1 VLVTVAQIQGSTPRAPGARMLYTADTQFDTIGGGHLEWRAAQMARAMLQAPLGQLAGQRR 60 VLV V ++GS PR GA ML DT F TIGGG LE+ A + AR +L G+ Sbjct: 24 VLVEVTDVKGSAPRDAGAWMLVARDTIFRTIGGGQLEYMAIEHARKILSG------GRDT 77 Query: 61 LERVALGPSLGQCCGGVVFLCFERIATDDEAMRTWQALEQSWSSGQDLWRAVPLDHAGAQ 120 V LGP +GQC C R++ M Sbjct: 78 PLDVPLGPEIGQC-------CGGRVSLSFRLM---------------------------- 102 Query: 121 LLIEGNIEDLPPDAYAHGLPPDTLGQRRQTRLLRDAQGRRWLLDWCHASRPQVVLFGAGH 180 HGL + +G+ +D A RP V +FGAGH Sbjct: 103 ---------------THGLADELVGK----------------VDTEIAMRPHVYIFGAGH 131 Query: 181 VGQAIVAVLSTLPCRVLWVDAREE-----------MFPPGLP-------PQIRTEATDVP 222 VG A+ LS P RV+ VD RE +F PG P + T + +P Sbjct: 132 VGGALARALSLTPVRVIMVDTREAELMKFQEKWEPVFRPGFHGNYICDVPGVETCLSAIP 191 Query: 223 NAAVDMADPGAYFLVMTHSHALDQQLSERILKRQDLAWFGLIGSLTKRRQFEHRLAERGF 282 AV A P + F+++TH HALD ++ L+RQD A+ G+IGS TK+ F++ L Sbjct: 192 EQAVRSAPPHSAFIILTHDHALDFLIAAEALQRQDAAYVGMIGSKTKKATFKNWLKREAG 251 Query: 283 SAAQLERITCPIGIDGIDGKEP 304 E + CPIG + K P Sbjct: 252 REDLFENLVCPIGGAVVKDKRP 273 >SMb21288 [O] COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Sme Sinorhizobium meliloti Length = 288 Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/181 (37%), Positives = 93/181 (51%), Gaps = 4/181 (2%) Query: 155 DAQGRRWLLDWCH---ASRPQVVLFGAGHVGQAIVAVLSTLPCRVLWVDAREEMFPPGLP 211 DA R L++ A RP V +FGAGHVG A+ LS +P R + VD RE Sbjct: 101 DADTRAALIERSDDEIAHRPHVYIFGAGHVGNALAMALSHVPLRTVLVDTREHELSAADV 160 Query: 212 PQIRTEATDVPNAAVDMADPGAYFLVMTHSHALDQQLSERILKRQDLAWFGLIGSLTKRR 271 P I T T +P A V A P + F+V+TH HALD ++ L R+D ++ G+IGS TKR Sbjct: 161 PGIETCLTAMPEATVRDAPPDSAFVVLTHDHALDFLIATEALGREDASYVGMIGSKTKRA 220 Query: 272 QFEHRLAERGFSAAQLERITCPIGIDGIDGKEPASIAIAVVAQLLQLWEKRQATPEQQPS 331 F++ L+ R+ CPIG + K P IA A++L R P + P+ Sbjct: 221 TFKNWLSREVDRPELFGRLVCPIGGTAVKDKRPPVIAALAAAEILTAALNRHLQP-RAPT 279 Query: 332 P 332 P Sbjct: 280 P 280 Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 43/91 (47%), Positives = 52/91 (57%), Gaps = 5/91 (5%) Query: 1 VLVTVAQIQGSTPRAPGARMLYTADTQFDTIGGGHLEWRAAQMARAMLQAPLGQLAGQRR 60 VLV VA GSTPR A ML + D F TIGGG LE+ A AR ++Q L R Sbjct: 21 VLVEVASAAGSTPRDADAWMLVSKDRTFSTIGGGQLEFMAIDHARKLVQGANADL----R 76 Query: 61 LERVALGPSLGQCCGGVVFLCFERIATDDEA 91 L + LGP +GQCCGG V L F+++ D A Sbjct: 77 LA-IPLGPEIGQCCGGHVALSFKKVDADTRA 106 >AGc4205 [O] COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 290 Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 61/150 (40%), Positives = 85/150 (56%), Gaps = 1/150 (0%) Query: 170 RPQVVLFGAGHVGQAIVAVLSTLPCRVLWVDAREEMFPPGLPPQIRTEATDVPNAAVDMA 229 +P V +FGAGHVG+A+ LS LP + V+ RE +P I + T +P A V Sbjct: 121 QPAVFIFGAGHVGKALADALSLLPLTLKVVETRESELR-DIPAGIASILTPMPEAFVQKI 179 Query: 230 DPGAYFLVMTHSHALDQQLSERILKRQDLAWFGLIGSLTKRRQFEHRLAERGFSAAQLER 289 +++TH HALD +++ L R DLA+ G+IGS TKR F H L G ++L + Sbjct: 180 PANGAAIIVTHDHALDFLIAKEALARDDLAYVGMIGSKTKRATFAHWLEREGEPPSRLAK 239 Query: 290 ITCPIGIDGIDGKEPASIAIAVVAQLLQLW 319 +T PIG G+ K PA IA V A+LLQ + Sbjct: 240 LTLPIGGTGVRDKRPAVIAALVAAELLQAF 269 Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 5/88 (5%) Query: 1 VLVTVAQIQGSTPRAPGARMLYTADTQFDTIGGGHLEWRAAQMARAMLQAPLGQLAGQRR 60 +LV + ++GS+PR G ML + + ++TIGGG E+ A ARAML+ A + R Sbjct: 23 ILVEIEAVKGSSPREAGTFMLVSQEALWETIGGGQFEYMAIDHARAMLRTG----AAEDR 78 Query: 61 LERVALGPSLGQCCGGVVFLCFERIATD 88 ++ + LGP +GQCCGG + F I + Sbjct: 79 MD-IPLGPEIGQCCGGRTLIRFRLITAE 105 >mlr5136 [O] COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Mlo Mesorhizobium loti Length = 300 Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 59/160 (36%), Positives = 84/160 (52%), Gaps = 6/160 (3%) Query: 171 PQVVLFGAGHVGQAIVAVLSTLPCRVLWVDAREEMFPPGLPPQIRTEATDVPNAAVDMAD 230 P V +FG GHVGQA+ A +S LP + ++ R E G+P + T T +P A V A Sbjct: 133 PHVYIFGGGHVGQALAAAISLLPVHGVVIETRAEALE-GMPQTVETRLTPMPEAEVRNAP 191 Query: 231 PGAYFLVMTHSHALDQQLSERILKRQDLAWFGLIGSLTKRRQFEH---RLAERGFSAAQL 287 G F ++TH HALD + LKR D A+ G+IGS TK+ F++ + AE + A+ Sbjct: 192 AGTGFAILTHDHALDFLIVAEALKRDDAAYVGMIGSKTKKATFKNWFQKSAEG--TEAEF 249 Query: 288 ERITCPIGIDGIDGKEPASIAIAVVAQLLQLWEKRQATPE 327 R+ PIG D + K P IA A+++ A P Sbjct: 250 ARLVSPIGGDAVKDKRPQVIAALAAAEIMTALVTHNAAPN 289 Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/87 (45%), Positives = 49/87 (56%), Gaps = 10/87 (11%) Query: 2 LVTVAQIQGSTPRAPGARMLYTADTQFDTIGGGHLEWRAAQMARAMLQA--PLGQLAGQR 59 LV VA +GSTPR GA ML + + F TIGGG LE+ A AR ML + P + + Sbjct: 20 LVEVAGTKGSTPREKGAFMLVSREAIFGTIGGGQLEYMAIDKARQMLASSPPRKRQGKEA 79 Query: 60 RLE--------RVALGPSLGQCCGGVV 78 R+E V LGP +GQCCGG V Sbjct: 80 RIEVDEVCATLDVPLGPEIGQCCGGRV 106 >DRA0179 [O] COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Dra Deinococcus radiodurans Length = 274 Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 62/178 (34%), Positives = 90/178 (50%), Gaps = 7/178 (3%) Query: 162 LLDWCHASRPQVVLFGAGHVGQAIVAVLSTLPCRVLWVDAREEMFPP-------GLPPQI 214 LL+ + P V LFG GHVG + +LS P + D+R P G P ++ Sbjct: 97 LLEPLRTAFPVVALFGIGHVGLELGLLLSRHPVELHLADSRAAQLTPERLAPLRGGPARL 156 Query: 215 RTEATDVPNAAVDMADPGAYFLVMTHSHALDQQLSERILKRQDLAWFGLIGSLTKRRQFE 274 + +P A+ PGA + +TH HA D L + L R DLA+ GLIGS K +F Sbjct: 157 HVHHSPIPEMALAELPPGACAVFLTHDHAEDLALCDAALHRGDLAFTGLIGSAVKWSRFR 216 Query: 275 HRLAERGFSAAQLERITCPIGIDGIDGKEPASIAIAVVAQLLQLWEKRQATPEQQPSP 332 +L G + ++ ITCP+G+ G+ GK PA IA+++ AQL L P + +P Sbjct: 217 EQLRAAGHTPEAIKTITCPVGLPGLGGKAPAVIALSIAAQLYPLLFPAVPAPSPERTP 274 >yqeB [O] COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Eco Escherichia coli K12 Length = 541 Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 7/180 (3%) Query: 155 DAQGRRWLLDWCHASRPQVVLFGAGHVGQAIVAVLSTLPCRVLWVDA-REEMFPPGLPPQ 213 D G + H RP++VL GAGHV +AI + L + D RE + P PP Sbjct: 88 DCGGAMSVFISVHGMRPRLVLIGAGHVNRAIAQSAALLGFDIAVADIYRESLNPELFPPS 147 Query: 214 IRTEATDVPNAAVDMAD--PGAYFLVMTHSHALDQQLSERILKRQDLAWFGLIGSLTKRR 271 + AAV+ D P + L+ T++ D++ +++++ Q +AW GL+ S K + Sbjct: 148 TTLLHAESFGAAVEALDIRPDNFVLIATNNQ--DREALDKLIE-QPIAWLGLLASRRKVQ 204 Query: 272 QFEHRLAERGFSAAQLERITCPIGIDGIDGKEPASIAIAVVAQLLQLWEKRQATPEQQPS 331 F +L E+G + + R+ P+G + I + P IAI+V+A++LQ+ +PS Sbjct: 205 LFLRQLREKGVAEEHIARLHAPVGYN-IGAETPQEIAISVLAEILQVKNNAPGGLMMKPS 263 >Z4214 [O] COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family EcZ Escherichia coli O157:H7 EDL933 Length = 541 Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 7/180 (3%) Query: 155 DAQGRRWLLDWCHASRPQVVLFGAGHVGQAIVAVLSTLPCRVLWVDA-REEMFPPGLPPQ 213 D G + H RP++VL GAGHV +AI + L + D RE + P PP Sbjct: 88 DCGGAMSVFISVHGMRPRLVLIGAGHVNRAIAQSAALLGFDIAVADIYRESLNPELFPPS 147 Query: 214 IRTEATDVPNAAVDMAD--PGAYFLVMTHSHALDQQLSERILKRQDLAWFGLIGSLTKRR 271 + AAV+ D P + L+ T++ D++ +++++ Q +AW GL+ S K + Sbjct: 148 TTLLHAESFGAAVEALDIRPDNFVLIATNNQ--DREALDKLIE-QPIAWLGLLASRRKVQ 204 Query: 272 QFEHRLAERGFSAAQLERITCPIGIDGIDGKEPASIAIAVVAQLLQLWEKRQATPEQQPS 331 F +L E+G + + R+ P+G + I + P IAI+V+A++LQ+ +PS Sbjct: 205 LFLRQLREKGVAEEHIARLHAPVGYN-IGAETPQEIAISVLAEILQVKNNAPGGLMMKPS 263