BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0018.0020.p (343 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value FN2103 [S] COG3181 Uncharacterized protein conserved in bacteria... 139 1e-32 SMb20025 Non COG 136 9e-32 SMc00499 Non COG 134 4e-31 SMa1927 Non COG 128 2e-29 RSc3088 [S] COG3181 Uncharacterized protein conserved in bacteri... 127 3e-29 AGl312 [S] COG3181 Uncharacterized protein conserved in bacteria... 124 2e-28 VC1334 [S] COG3181 Uncharacterized protein conserved in bacteria... 122 1e-27 AGc180 [S] COG3181 Uncharacterized protein conserved in bacteria... 118 2e-26 AGpA473 [S] COG3181 Uncharacterized protein conserved in bacteri... 117 3e-26 AGc4482 [S] COG3181 Uncharacterized protein conserved in bacteri... 95 2e-19 >FN2103 [S] COG3181 Uncharacterized protein conserved in bacteria Fnu Fusobacterium nucleatum Length = 308 Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 90/298 (30%), Positives = 143/298 (47%), Gaps = 9/298 (3%) Query: 47 WPERPVTLVVPWGAGGGTDATARIIGALLEKDLGQPVNVVNRTGGNGAVGHQAIASAAPD 106 +P++PV +++ + AGGGTD ARI+ A +K+ Q +VN+ G +G +G+ +A A PD Sbjct: 16 YPDKPVNVIIAYKAGGGTDVGARILMAEAQKNFPQTFVIVNKPGADGEIGYTELAKATPD 75 Query: 107 GYTIGIATVEISM-MHHQGLTKLTPRDFTPLALMNFDPAALTVSHDSPYKSFDDLLKAIK 165 GYTIG + + + H+ TK D P+ +DP L V DS +++ + + K Sbjct: 76 GYTIGFINLPTFVSLPHERQTKYKIDDVEPIMNHVYDPGVLVVKADSQFQTLAEFVDYAK 135 Query: 166 ANPGKLKASGTGQGGIWHLGLAGMLNDLKVAPNAVRFVPSNGAAPAMVDLAAGGVDIVAA 225 A+P +L S G G H+G A + + V VP G+ + L G V+ A Sbjct: 136 AHPEELTISNNGTGASNHIGAAHFAKEAGI---QVTHVPFGGSTDMISALRGGHVNATVA 192 Query: 226 SLPEARSLIDAGKAVPLVVMANEPAALYPKVPTLKSLTGSGW--TNGAWRGIVAPKGLPA 283 + E SL+ +G+ L + VPT LT SG+ G+ R IVAPKG P Sbjct: 193 KISEVASLVKSGELKLLASFTENRLEGFEDVPT---LTESGYPVIFGSARAIVAPKGTPK 249 Query: 284 EVQTRLSASLKKIYESKDYKDFMSGRGFGVMYADSAEFGKFMDKSDADMGAILKTLGM 341 E+ +L K ES D + + Y E +++ + + + TLG+ Sbjct: 250 EIIQKLHDVFKTALESPDNIEKSKNASLPLKYMSPEELAQYIKDQEKYIIETVPTLGI 307 >SMb20025 Non COG Length = 325 Score = 136 bits (342), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 96/283 (33%), Positives = 138/283 (48%), Gaps = 11/283 (3%) Query: 24 VLKSLMAGTVALAALAAPAAFAAWPERPVTLVVPWGAGGGTDATARIIGALLEKDLGQPV 83 +L +L+ A++ AA A+ +PER +T+VVP+ AGG TD AR++ + KDLGQ + Sbjct: 3 ILNALLGAATAVSLFAASASAQTYPERTITMVVPFSAGGPTDTVARLVAESMSKDLGQQI 62 Query: 84 NVVNRTGGNGAVGHQAIASAAPDGYT-----IGIATVEISMMHHQGLTKLTPRDFTPLAL 138 V N G G +G +A A PDGYT IG+AT S ++ L T F + L Sbjct: 63 IVENVGGAGGTLGAGRVAQADPDGYTLLLHHIGMAT---SATLYRKLAYDTLNAFEYVGL 119 Query: 139 MNFDPAALTVSHDSPYKSFDDLLKAIKANPGKLKASGTGQGGIWHLGLAGMLNDLKVAPN 198 + P + D L++ +KAN + + G G H L GM+ + Sbjct: 120 VTEVPMTIVARKDFEPTDLKGLIEHVKANKDTVTVANAGIGAASH--LCGMMF-MSAIET 176 Query: 199 AVRFVPSNGAAPAMVDLAAGGVDIVAASLPEARSLIDAGKAVPLVVMANEPAALYPKVPT 258 + VP G PAM DL G VDI+ I G V + + ++P +PT Sbjct: 177 PLTTVPYKGTGPAMTDLLGGQVDIMCDQTTNTTKQIQGGTIKAYAVTSPQRLKIFPDLPT 236 Query: 259 LKSLTGSGWTNGAWRGIVAPKGLPAEVQTRLSASLKKIYESKD 301 + SG+ G W GI APKG PAEV RLS SL+K + ++ Sbjct: 237 AEEAGLSGFQVGIWHGIYAPKGTPAEVTDRLSKSLQKALKDEN 279 >SMc00499 Non COG Length = 318 Score = 134 bits (336), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 146/305 (47%), Gaps = 11/305 (3%) Query: 37 ALAAPAAFAAWPERPVTLVVPWGAGGGTDATARIIGALLEKDLGQPVNVVNRTGGNGAVG 96 A+ A + A +PE+PVTLVV GAGG D R + LLEK+ G V V NR GG+GAVG Sbjct: 16 AVPANSIAAEFPEKPVTLVVWAGAGGALDTYGRKLAELLEKEAGWTVKVDNRPGGSGAVG 75 Query: 97 HQAIASAAPDGYTIGIATVEISMMHHQGLTKLTPRDFTPLALMNFDPAALTVSHDSPYKS 156 I + DGY I + T ++ QGL DF L M +P++L V DS +KS Sbjct: 76 VSQIMTQPADGYNILVLTGTLTFGIAQGLIPFELEDFRLLRAMQSEPSSLAVLSDSQFKS 135 Query: 157 FDDLLKAIKANPGKLKASGTGQGGIWHLGLAGMLNDLKVAPNAVRFVPSNGAAPAMVDLA 216 DD K +K NP LK G GG L + +K ++P + + + L Sbjct: 136 VDDFTKYMKDNPNGLKVGGHAPGGFHQYMLYQL---MKKGGFESGWIPHDASGKVTLGLL 192 Query: 217 AGGVDIVAASLPEARSLIDAGKAVPLVVMANEPAALYPKVPTLKSLTGSGWTNGAWRGIV 276 +D + + + +G+ L V +E +A P VPT K G WRG+ Sbjct: 193 GKHLDAAMMTPSTGLAQVKSGEIKLLGVSTDERSAFLPDVPTFKE-QGYDIEGAIWRGVA 251 Query: 277 APKGLPAEVQTRLSASLKKIYESKDYKDFMSGRGFGVMYADSAEFG--KFMDKSDADMGA 334 G P + + A++ K+ S+D+K F + + + DS ++ +F ++ +D+ Sbjct: 252 VKAGTPDDAVGAIQAAVDKVTASEDWKKFQTEQ-----FQDSPDWKEEEFTKRAQSDLAN 306 Query: 335 ILKTL 339 L+ L Sbjct: 307 QLEFL 311 >SMa1927 Non COG Length = 330 Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 104/280 (37%), Positives = 146/280 (52%), Gaps = 9/280 (3%) Query: 20 TRRTVLKSLMAGTVALAALAAPAAFAAWPERPVTLVVPWGAGGGTDATARIIGALLEKDL 79 TRR + + A ALA L APA +P+R VTLVVP+ AGG TD ARII + +DL Sbjct: 7 TRRAAMAAGFAFWSALA-LGAPAKAQDFPDRTVTLVVPFAAGGSTDVVARIIAQKMSEDL 65 Query: 80 GQPVNVVNRTGGNGAVGHQAIASAAPDGYTIGIATVEISMMHHQGLTKLTP----RDFTP 135 GQ V V N G G +G +A A PDGYTI +ATV ++ L K P +DF P Sbjct: 66 GQQVIVQNVAGAGGNLGAANVARAEPDGYTILMATVATHALNPLIL-KTKPYDPEKDFAP 124 Query: 136 LALMNFDPAALTVSHDSPYKSFDDLLKAIKANPGKLKASGTGQGGIWHLGLAGMLNDLKV 195 ++L+ P L V+ + P K+ +LL +KA P K + +G G H L+G L K+ Sbjct: 125 ISLLVVVPNVLVVNPELPAKTVQELLALLKAEPEKYAYASSGNGTPLH--LSGELFK-KM 181 Query: 196 APNAVRFVPSNGAAPAMVDLAAGGVDIVAASLPEARSLIDAGKAVPLVVMANEPAALYPK 255 A ++ +P G+ PA+ D+ V I+ +LP + I AG L V E A+ +P Sbjct: 182 AGVEMQHIPYKGSGPALNDVLGNQVPIMFDNLPSSSGHIKAGTLRALAVTTAERASSFPD 241 Query: 256 VPTLKSLTGSGWTNGAWRGIVAPKGLPAEVQTRLSASLKK 295 +PT+ G+ W + AP P V RL+ + KK Sbjct: 242 IPTIAESGIPGYETYTWNALFAPANTPQPVIARLNEAAKK 281 >RSc3088 [S] COG3181 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 317 Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 86/273 (31%), Positives = 136/273 (49%), Gaps = 8/273 (2%) Query: 39 AAPAAFAAWPERPVTLVVPWGAGGGTDATARIIGALLEKDLGQPVNVVNRTGGNGAVGHQ 98 AAPA +P +P+ ++V + GG +D AR +G L LGQPV V NR G G++G Sbjct: 12 AAPALAQDYPTKPIRIIVAYPTGGISDNVARALGEKLAAQLGQPVVVENRAGAGGSIGMD 71 Query: 99 AIASAAPDGYTIGIATVE-ISMMHHQGLTKLTP-RDFTPLALMNFDPAALTVSHDSPYKS 156 A+A +APDGYT+G + V +++ H G P +D P+ + + P L + KS Sbjct: 72 AVAKSAPDGYTLGFSAVSPLTLNPHFGKLPYDPQKDIAPVVNVMYAPMILLGTSSFTGKS 131 Query: 157 FDDLLKAIKANPGKLKASGTGQGGIWHLGLAGMLNDLKVAPNA-VRFVPSNGAAPAMVDL 215 F D+L +A PG ++ S +G G + HL L +KV + + +P G + D Sbjct: 132 FADMLAQSRAKPGTIRWSTSGMGTVGHLA----LEQVKVQAHVDITLIPYKGGGQQLTDA 187 Query: 216 AAGGVDIVAASL-PEARSLIDAGKAVPLVVMANEPAALYPKVPTLKSLTGSGWTNGAWRG 274 G V++++ ++ P I +GK PL V A P VPT L + + G Sbjct: 188 LGGQVEVMSTNVGPTLMQHISSGKLRPLAVGAPHRLDALPTVPTFAELGYAKANMASTFG 247 Query: 275 IVAPKGLPAEVQTRLSASLKKIYESKDYKDFMS 307 + AP PA + RL+ + K + D +D ++ Sbjct: 248 VFAPAKTPAPIIARLNTEINKALAAPDLRDRLT 280 >AGl312 [S] COG3181 Uncharacterized protein conserved in bacteria Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 329 Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 95/270 (35%), Positives = 140/270 (51%), Gaps = 10/270 (3%) Query: 19 STRRTVLKSLMAGTVALAALAAPAAFAAWPERPVTLVVPWGAGGGTDATARIIGALLEKD 78 S RRTVLK L A V+ + A+ +P+R +TLVVP+ AGG TD AR+I + + Sbjct: 6 SKRRTVLK-LAAAAVSFGMMGMTASAEGFPDRTITLVVPFAAGGSTDVVARVIAQKMGDE 64 Query: 79 LGQPVNVVNRTGGNGAVGHQAIASAAPDGYTIGIATVEISMMHHQGLTKLTP----RDFT 134 LGQ + V N G G +G +A A PDGYTI + TV ++ L K P +DF Sbjct: 65 LGQQIVVENVAGAGGNLGADRVARAEPDGYTILMGTVATHALNPLIL-KTKPYDPQKDFA 123 Query: 135 PLALMNFDPAALTVSHDSPYKSFDDLLKAIKANPGKLKASGTGQGGIWHLGLAGMLNDLK 194 P++L+ P L V+ S ++L+ +KA P K + +G G H L+G L Sbjct: 124 PVSLLVVVPNVLVVNPKLNVNSVEELIALLKAEPDKYAYASSGNGTPLH--LSGELFK-S 180 Query: 195 VAPNAVRFVPSNGAAPAMVDLAAGGVDIVAASLPEARSLIDAGKAVPLVVMANEPAALYP 254 +A +++ VP GA PA+ DL + I+ +LP + I +G L V E A+ +P Sbjct: 181 MAGVSMQHVPYKGAGPALNDLLGNQISIMFDNLPSSSGHIKSGTLRALGVTTKERASSFP 240 Query: 255 KVPTLKSLTGSGWTNGAWRGIVAPKGLPAE 284 +PT+ T G+ W + AP G PA+ Sbjct: 241 DLPTIAE-TVPGYETYTWNALFAPAGTPAD 269 >VC1334 [S] COG3181 Uncharacterized protein conserved in bacteria Vch Vibrio cholerae Length = 323 Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 94/331 (28%), Positives = 160/331 (48%), Gaps = 13/331 (3%) Query: 17 CKSTRRTVLKSLMAGTVALAALAAPAAFAAWPERPVTLVVPWGAGGGTDATARIIG-ALL 75 K + ++ +++A T + ++LAA + +VP GAGGG D TAR G AL+ Sbjct: 2 LKFFKPSLTAAMLAATFSFSSLAADL-------EKIHFIVPGGAGGGWDMTARATGDALM 54 Query: 76 EKDLGQPVNVVNRTGGNG--AVGHQAIASAAPDGYTIGIATVEISMMHHQGLTKLTPRDF 133 + L + N +GG G A+ H I +A T+ I + I + G+ + RD Sbjct: 55 KAKLVGNASYQNLSGGGGGKAIAH-LIETADRQQDTLMINSTPIVIRSLSGVFPQSFRDL 113 Query: 134 TPLALMNFDPAALTVSHDSPYKSFDDLLKAIKANPGKLK-ASGTGQGGIWHLGLAGMLND 192 TP+A + D A V+ DS Y S++ ++ KANP ++K A G+ +G + HL A Sbjct: 114 TPVAEIVSDYGAFVVAGDSKYTSWEQVVADFKANPKQIKIAGGSARGSMDHLVAAAAFKG 173 Query: 193 LKVAPNAVRFVPSNGAAPAMVDLAAGGVDIVAASLPEARSLIDAGKAVPLVVMANEPAAL 252 + P VR+V + AM L +G +++ L E + +G+ L + + + + Sbjct: 174 QGLDPKEVRYVAYDAGGSAMTALLSGETQVLSTGLGEVLEMSKSGQVRVLAITSPKRLDI 233 Query: 253 YPKVPTLKSLTGSGWTNGAWRGIVAPKGLPAEVQTRLSASLKKIYESKDYKDFMSGRGFG 312 P +PTL G+ T WRG A G+ AE + KK++ S+++K G+ Sbjct: 234 APDIPTLADY-GNPTTFVNWRGYFAAPGVSAEKVAEWNEVFKKMFASEEWKVIRDRNGWI 292 Query: 313 VMYADSAEFGKFMDKSDADMGAILKTLGMAR 343 Y EF F+++ + MG +++ LG + Sbjct: 293 DSYKGDKEFYAFLEEQEKQMGDLMRELGFLK 323 >AGc180 [S] COG3181 Uncharacterized protein conserved in bacteria Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 337 Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 94/274 (34%), Positives = 128/274 (46%), Gaps = 13/274 (4%) Query: 33 VALAALAAPAAFAAWPERPVTLVVPWGAGGGTDATARIIGALLEKDLGQPVNVVNRTGGN 92 V+L AL+A A +PER +T+VVP+ AGG TD AR++ + KDLGQ + V N G Sbjct: 26 VSLFALSASAQ--NYPERNITMVVPFAAGGPTDTVARLVAESMSKDLGQQIIVENVGGAG 83 Query: 93 GAVGHQAIASAAPDGYT-----IGIATVEISMMHHQGLTKLTPRDFTPLALMNFDPAALT 147 G +G +A+A PDGYT IG+AT S ++ L T F + L+ P + Sbjct: 84 GTLGAGRVAAADPDGYTVLLHHIGMAT---SATLYRKLAYDTTNAFEYVGLVTEVPMTIL 140 Query: 148 VSHDSPYKSFDDLLKAIKANPGKLKASGTGQGGIWHLGLAGMLNDLKVAPNAVRFVPSNG 207 + K L+ KAN K+ + G G H L GML + + VP G Sbjct: 141 SRKNLETKDLKGLIDYAKANKDKVTVANAGIGAASH--LCGMLF-MSAIETPLVTVPYKG 197 Query: 208 AAPAMVDLAAGGVDIVAASLPEARSLIDAGKAVPLVVMANEPAALYPKVPTLKSLTGSGW 267 PAM DL G VDI+ I G V + + P VPT+ Sbjct: 198 TGPAMTDLLGGQVDIMCDQTTNTTKQIQGGTVKAYAVTTAKRLDVLPDVPTVVEAGLPKL 257 Query: 268 TNGAWRGIVAPKGLPAEVQTRLSASLKKIYESKD 301 G W GI PKG PAE+ +LS SL+ + K+ Sbjct: 258 EVGIWHGIYTPKGTPAEINEKLSKSLQVALKDKN 291 >AGpA473 [S] COG3181 Uncharacterized protein conserved in bacteria Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 318 Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 92/317 (29%), Positives = 142/317 (44%), Gaps = 9/317 (2%) Query: 25 LKSLMAGT--VALAALAAPAAFAAWP-ERPVTLVVPWGAGGGTDATARIIGALLEKDLGQ 81 +K L+ T V L A A A WP +RP+ +V + GGGTD R + +EK+LG Sbjct: 1 MKHLIRNTALVTTLFLGAGVAHADWPTDRPIEFIVAFAPGGGTDVMNRTLAPYVEKELGA 60 Query: 82 PVNVVNRTGGNGAVGHQAIASAAPDGYTI-GIATVEISMMHHQGLTKLTPRDFTPLALMN 140 + V+NR G +G + + A+ A PDGYT+ + T M + P +A + Sbjct: 61 KITVLNRPGASGEIAYTAMTQARPDGYTVSSLNTPGYLTMQMDRKVRFDPAKLCLVARIV 120 Query: 141 FDPAALTVSHDSPYKSFDDLLKAIKANPGKLKASGTGQGGIWHLGLAGMLNDLKVAPNAV 200 DP + V S + + DL+ K NPG + TG G HL + + + AV Sbjct: 121 EDPGSFIVQSSSKFITLKDLVAFAKENPGAVTVGTTGLGTDEHLAMLQLEKAAGIDLTAV 180 Query: 201 RFVPSNGAAPAMVDLAAGGVDIVAASLPEARSLIDAGKAVPLVVMANEPAALYPKVPTLK 260 F NGA A L G VD + ++ E D L A + A++ P +PT K Sbjct: 181 TF---NGANEARTALLGGHVDTIGINVGEFVG-SDHSAFKNLGQFAEDRASIAPDLPTAK 236 Query: 261 SLTGSGWTNGAWRGIVAPKGLPAEVQTRLSASLKKIYESKDYKDFMSGRGFGVMYADSAE 320 G + RGI +P E++T+ S ++KK E+ D++ + Y S + Sbjct: 237 E-QGFEVLMSSERGIAMSCDVPDEIRTKFSGAIKKALENPDFQAKAKQMSLALSYRSSED 295 Query: 321 FGKFMDKSDADMGAILK 337 + K + + AI K Sbjct: 296 WNKELPVRGERLSAIWK 312 >AGc4482 [S] COG3181 Uncharacterized protein conserved in bacteria Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 314 Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 81/323 (25%), Positives = 149/323 (46%), Gaps = 13/323 (4%) Query: 25 LKSLMAGTVALAALAAPAAFAAWPERPVTLVVPWGAGGGTDATARIIGALLEKD-LGQPV 83 +K + GT +A PA A + T++ P GGG D TAR + +L+++ + + V Sbjct: 1 MKHFLIGTFLAGVIALPAVAADY-----TIIAPANPGGGWDQTARSLQTVLQEEGISKSV 55 Query: 84 NVVNRTGGNGAVGHQAIASAA---PDGYTIGIATVEISMMHHQGLTKLTPRDFTPLALMN 140 V N G G +G AS P+ +G + +++ + +T ++ TP+A + Sbjct: 56 QVQNVPGAGGTIGLAQFASQQKGNPNALIVGGYVMVGAILTNN--APVTLKEVTPIARLT 113 Query: 141 FDPAALTVSHDSPYKSFDDLLKAIKANPGKLKASGTGQGGIWHLGLAGMLNDLKVAPNAV 200 + A+ V SP K+ DL+ +K +PG + G GG H+ + + V P + Sbjct: 114 GEYEAIVVPASSPLKTIGDLVDQLKKDPGSVSWGGGSAGGTDHIAVGLIAKAAGVDPTKI 173 Query: 201 RFVPSNGAAPAMVDLAAGGVDIVAASLPEARSLIDAGKAVPLVVMANEPAALYPKVPTLK 260 ++ +G A+ + V +S E S + AG + L+ +++E PTLK Sbjct: 174 NYIAYSGGGEALASILGSQVTAGISSYGEFESQVKAG-TLRLLAVSSEEKLDGVDAPTLK 232 Query: 261 SLTGSGWTNGAWRGIVAPKGLPAEVQTRLSASLKKIYESKDYKDFMSGRGFGVMYADSAE 320 +G WR + AP GL E + ++A ++K+ +S +++ + + + Y E Sbjct: 233 E-SGLDVVVQNWRMVAAPPGLTPEQEKAVNADIEKLVKSAKWQETLKTKSWMDTYLAGDE 291 Query: 321 FGKFMDKSDADMGAILKTLGMAR 343 F + K AILK +G+ + Sbjct: 292 FKAQLAKDTDATAAILKDIGLVK 314