BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0088.p (278 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CC1203 [M] COG0845 Membrane-fusion protein Ccr Caulobacter vibri... 73 7e-13 VC0165 [M] COG0845 Membrane-fusion protein Vch Vibrio cholerae 72 1e-12 PA4374 [M] COG0845 Membrane-fusion protein Pae Pseudomonas aerug... 72 2e-12 aq_698 [M] COG0845 Membrane-fusion protein Aae Aquifex aeolicus 71 2e-12 HI0894 [M] COG0845 Membrane-fusion protein Hin Haemophilus influ... 68 2e-11 PM1134 [M] COG0845 Membrane-fusion protein Pmu Pasteurella multo... 67 3e-11 SMa0876 [M] COG0845 Membrane-fusion protein Sme Sinorhizobium me... 62 2e-09 >CC1203 [M] COG0845 Membrane-fusion protein Ccr Caulobacter vibrioides Length = 354 Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 5/200 (2%) Query: 53 MLDKREIRAQLAPVRYTTIAAEIGAVIARLPVTEGARFQRGQTLVQFDCAVQNAQLNKAR 112 D+ E+ ++ TI + +I + T+G RGQ LV+ ++A + +AR Sbjct: 37 FTDRIEVLGAAKGLQSVTITSNTAELITAVRFTDGQAVSRGQVLVELKAEAEDAGIAEAR 96 Query: 113 ASLSAADKAWQANKRLAELNSVGRVELDSSEA--EVAKARADMAAQAALVGKCSIAAPFG 170 A L+ A++ ++ K LA+ R + S A E AKA D A L I APF Sbjct: 97 ARLAQAERDYKRWKTLADQGIAPRATAEQSLAAYETAKAVVDSARANKL--DRVIRAPFA 154 Query: 171 GRVAEQKVREQQFAQPGQTLLEIIDDSALELEFIVPSKWLVWIKPGKVFQIRIDET-GKT 229 GRV V PG ++ + D S + ++F VP ++L ++ G + D G+T Sbjct: 155 GRVGISDVAPGMLISPGTAIVTLDDTSVIRVDFSVPDRYLETLRIGLPINAQPDALPGET 214 Query: 230 YPARVQRLGARVDPVSQSVK 249 + R+ +L R+D ++++K Sbjct: 215 FRGRIAQLDTRIDTTTRAIK 234 >VC0165 [M] COG0845 Membrane-fusion protein Vch Vibrio cholerae Length = 368 Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 74/162 (45%) Query: 63 LAPVRYTTIAAEIGAVIARLPVTEGARFQRGQTLVQFDCAVQNAQLNKARASLSAADKAW 122 + P + T+ E VI ++ G + + Q LV D AV+ A L A L AA + Sbjct: 64 IEPNQGVTLTTETAGVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKAKY 123 Query: 123 QANKRLAELNSVGRVELDSSEAEVAKARADMAAQAALVGKCSIAAPFGGRVAEQKVREQQ 182 + K L S+ + D +EA AD+ + A + + I APF G + + V Q Sbjct: 124 ERYKGLFAKGSISKESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIRNVFLGQ 183 Query: 183 FAQPGQTLLEIIDDSALELEFIVPSKWLVWIKPGKVFQIRID 224 + QPG ++ + D S + L F VP + + I + I +D Sbjct: 184 YLQPGTDIVRLEDTSVMRLRFTVPQRDISRISLDQEVDIFVD 225 >PA4374 [M] COG0845 Membrane-fusion protein Pae Pseudomonas aeruginosa Length = 376 Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 66/279 (23%), Positives = 129/279 (46%), Gaps = 10/279 (3%) Query: 8 RPMQLLSAPIIALVMAAAATPSCLAAAQTAQAADPARPAPSAPPGMLDKREIRAQLAPV- 66 R M ++ A +IA+V A Q A + P +P S + +KR +++L + Sbjct: 4 RRMLIMLAAVIAVVAILAGYKVYSIRQQIALFSAP-KPPISVTASLAEKRPWQSRLPAIG 62 Query: 67 -----RYTTIAAEIGAVIARLPVTEGARFQRGQTLVQFDCAVQNAQLNKARASLSAADKA 121 + T+ AE+ + + G + + Q L+Q + V+ A L A A L A Sbjct: 63 SLKAFQGVTLTAEVSGTVRDVLFLSGDQVKLDQPLIQLESDVEEATLRTAEADLGLARAE 122 Query: 122 WQANKRLAELNSVGRVELDSSEAEVAKARADMAAQAALVGKCSIAAPFGGRVAEQKVREQ 181 +Q + L ++ + E D A+ AK A +A A + K + APF G + ++V Sbjct: 123 YQRGRELIGSKAISKSEFDRLAAQWAKTSATVAELKAALAKKRVLAPFAGTIGIRQVDVG 182 Query: 182 QFAQPGQTLLEIIDDSALELEFIVPSKWLVWIKPGKVFQIRIDET-GKTYPARVQRLGAR 240 + PG + + D S L L+F +P + + G++ ++R+ + + A + + + Sbjct: 183 DYVSPGTPIATLQDLSTLLLDFHLPEQDFPLLSRGQLVKVRVAAYPAQVFDAEIAAINPK 242 Query: 241 VDPVSQSVKVVGVVDGKFNELMAGM--SGAVMFGQQEQQ 277 VD +++++V ++ +L+ GM + VM +EQ+ Sbjct: 243 VDNETRNLQVRAALENPDGKLLPGMFANLEVMLPGEEQR 281 >aq_698 [M] COG0845 Membrane-fusion protein Aae Aquifex aeolicus Length = 374 Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 31/236 (13%) Query: 71 IAAEIGAVIARLPVTEGARFQRGQTLVQFDCAVQNAQLN--------------KARASLS 116 I+ + + + V EG ++GQTL D AQ+N A+A Sbjct: 72 ISTRVMGYVVDVKVKEGDFVKKGQTLFVIDPRDVKAQINIMKQRIAQAQKNYEAAKAHYE 131 Query: 117 AADKAWQANKRLAELNSVGRVELDSSEA--------------EVAKARADMAAQAALVGK 162 A K ++ K+L + ++ + E D EA E+ AR + A + Sbjct: 132 AVKKTYERFKKLLKEGAITQHEFDQVEAQYLAAKAKLQAAKAEIRVAREAYNSAKAQLSY 191 Query: 163 CSIAAPFGGRVAEQKVREQQFAQPGQTLLEIIDDSALELEFIVPSKWLVWIKPGKVFQIR 222 + APF G V ++ V A PG L +++ ++E P K+ I G ++ Sbjct: 192 AEVKAPFDGYVIQKMVDRGDIANPGMPL-AVLETRPYKVEVSFPEKYFGEINIGDTLEVY 250 Query: 223 IDETGKTYPARVQRLGARVDPVSQSVKVVGVVDGKFNELMAGMSGAVMFGQQEQQP 278 +++ G+ +PA+V + VDPVS++ KV ++D N + +G+ V ++ ++P Sbjct: 251 VEKLGRVFPAKVVEVEPAVDPVSRTFKVKALIDD--NNVKSGLFVKVFKLEKIEEP 304 >HI0894 [M] COG0845 Membrane-fusion protein Hin Haemophilus influenzae Length = 382 Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 95/189 (50%), Gaps = 2/189 (1%) Query: 79 IARLPVTEGARFQRGQTLVQFDCAVQNAQLNKARASLSAADKAWQANKRLAELNSVGRVE 138 ++++ V G ++G+ LV+ D +V+ A L A+A LSA + +Q L N+V R E Sbjct: 76 VSQVLVQNGQNVKKGEVLVELDSSVERANLQAAQAQLSALRQTYQRYVGLLNSNAVSRQE 135 Query: 139 LDSSEAEVAKARADMAAQAALVGKCSIAAPFGGRVAEQKVREQQFAQPGQTLLEIIDDSA 198 +D+++A A + + A + + I APF G+ K+ Q+ G ++ + D S+ Sbjct: 136 MDNAKAAYDAQVASIESLKAAIERRKIVAPFDGKAGIVKINVGQYVNVGTEIVRVEDTSS 195 Query: 199 LELEFIVPSKWLVWIKPGKVFQIRID-ETGKTYPARVQRLGARVDPVSQSVKVVGVVD-G 256 ++++F + L + G+ D G+T+ AR+ + ++ + V V D Sbjct: 196 MKVDFALSQNDLDKLHIGQRVTATTDARLGETFSARITAIEPAINSSTGLVDVQATFDPE 255 Query: 257 KFNELMAGM 265 ++L++GM Sbjct: 256 DGHKLLSGM 264 >PM1134 [M] COG0845 Membrane-fusion protein Pmu Pasteurella multocida Length = 387 Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 85/165 (51%), Gaps = 1/165 (0%) Query: 71 IAAEIGAVIARLPVTEGARFQRGQTLVQFDCAVQNAQLNKARASLSAADKAWQANKRLAE 130 ++A+ + ++ V G ++G+ LV D +V+ A L ++A L + +Q L + Sbjct: 68 LSAQTSGTVQQVLVQSGQHVKKGEVLVVLDSSVELANLKASQAQLLSVKATYQRYLSLYK 127 Query: 131 LNSVGRVELDSSEAEVAKARADMAAQAALVGKCSIAAPFGGRVAEQKVREQQFAQPGQTL 190 SV + ELD++++ +++AA A + + I APF G+ KV Q+ PG + Sbjct: 128 TKSVSQQELDNAKSAYEALESNIAALKAGIARRQILAPFDGQTGIVKVNVGQYVNPGMEI 187 Query: 191 LEIIDDSALELEFIVPSKWLVWIKPGKVFQIRID-ETGKTYPARV 234 + + D S+++++F + L + G+ D +G+T+ A++ Sbjct: 188 VRVEDTSSMKIDFALSQTELEHLHVGQKVTATADARSGETFAAKI 232 >SMa0876 [M] COG0845 Membrane-fusion protein Sme Sinorhizobium meliloti Length = 367 Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 58/228 (25%), Positives = 105/228 (46%), Gaps = 15/228 (6%) Query: 53 MLDKREIRAQLAPVRYTTIAAEIGAVIARLPVTEGARFQRGQTLVQFDCAVQNAQLNKAR 112 M ++ I L P+R +T+ + + + I LPV G G LV+F+ + + + Sbjct: 54 MANEVRIVGSLTPIRRSTLTSRVSSTIIELPVQIGDVVNAGDLLVRFERGALESAVTGRK 113 Query: 113 A---SLSA----ADKAWQANKRLAELNSVGRVELDSSEAEVAKARADMAAQAALV----- 160 A +LSA A+ + N RL E + ++ A+V RA + ++ A V Sbjct: 114 AEADALSAQTELAEAVLERNTRLGERGAASEATRLAALADVLDLRAQLRSKQAEVSDAER 173 Query: 161 --GKCSIAAPFGGRVAEQKVREQQFAQPGQTLLEIIDDSALELEFIVPSKWLVWIKPGKV 218 + A FGG +A + V E Q L+ I++ + LE++ VP+ + I+ + Sbjct: 174 SLSHAEVRAEFGGVIAARSVEEGQTVPLNTQLMTIVELNRLEVDAGVPTSRIPLIRLKQS 233 Query: 219 FQIRIDET-GKTYPARVQRLGARVDPVSQSVKVVGVVDGKFNELMAGM 265 ++ ++ G+T+ V R+ D S++V+V VD + L GM Sbjct: 234 VELTVEGFPGRTFSGEVARISPTADAGSRAVRVFIAVDNEEGLLRGGM 281