BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0073.p (217 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0921 [P] COG2011 ABC-type metal ion transport system, permeas... 283 3e-76 VC0906 [P] COG2011 ABC-type metal ion transport system, permease... 221 9e-58 BMEII0336 [P] COG2011 ABC-type metal ion transport system, perme... 216 4e-56 mll4791 [P] COG2011 ABC-type metal ion transport system, permeas... 209 5e-54 AGl763 [P] COG2011 ABC-type metal ion transport system, permease... 207 1e-53 FN0659 [P] COG2011 ABC-type metal ion transport system, permease... 207 2e-53 SMc03158 [P] COG2011 ABC-type metal ion transport system, permea... 204 1e-52 PA2351 [P] COG2011 ABC-type metal ion transport system, permease... 192 6e-49 YPO1319 [P] COG2011 ABC-type metal ion transport system, permeas... 191 1e-48 XF0874 [P] COG2011 ABC-type metal ion transport system, permease... 174 1e-43 >RSc0921 [P] COG2011 ABC-type metal ion transport system, permease component Rso Ralstonia solanacearum Length = 217 Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 162/217 (74%), Positives = 186/217 (85%) Query: 1 MSSELIDLFVSSFGETLMMVVISGVVGSLLGIPLGIALHITEAKGVLPNVAFNRIAGLLV 60 M S+L DLF+ +FGETL MV +SG +G+L G+PLG+ L++T GVL AFNRIAGL+V Sbjct: 1 MWSDLTDLFLPAFGETLAMVGVSGGIGALFGVPLGVLLYLTGPGGVLSAPAFNRIAGLIV 60 Query: 61 NAVRSTPFIILLVAVIPMTRFFVGTSIGTAAAIVPLTIAAAPFIARLVETALREVDHGLV 120 NAVRS PFIILLVAVIP TR G+SIGTAAA VPLT+AA PFIARLVETALREVD GL+ Sbjct: 61 NAVRSVPFIILLVAVIPFTRLLAGSSIGTAAATVPLTLAAIPFIARLVETALREVDRGLI 120 Query: 121 EAAQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180 EAAQ+MGATT Q++YKVL+PEA GI+AGLTITFVSLVGYSAMAG IGGGGLGDLGIRYG Sbjct: 121 EAAQSMGATTGQLVYKVLLPEAMPGILAGLTITFVSLVGYSAMAGTIGGGGLGDLGIRYG 180 Query: 181 YQRFLPEVMLAVVLILIVFVQLVQSLGDLLVRKLSHR 217 YQR+ ++MLAVV+ILIVFVQ VQS GD LVR+LSHR Sbjct: 181 YQRYESDIMLAVVVILIVFVQAVQSTGDWLVRRLSHR 217 >VC0906 [P] COG2011 ABC-type metal ion transport system, permease component Vch Vibrio cholerae Length = 225 Score = 221 bits (563), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 123/211 (58%), Positives = 160/211 (75%) Query: 7 DLFVSSFGETLMMVVISGVVGSLLGIPLGIALHITEAKGVLPNVAFNRIAGLLVNAVRST 66 DL +++ +TL MV I+G VG LGIPLG+ LH T+ +G+L N+ NR G +VN RS Sbjct: 15 DLLLTATWQTLYMVAIAGAVGFALGIPLGVILHTTKKEGLLENLPLNRALGAVVNIGRSV 74 Query: 67 PFIILLVAVIPMTRFFVGTSIGTAAAIVPLTIAAAPFIARLVETALREVDHGLVEAAQAM 126 PF++L+VA+IP+T+ VGT IGT AAIVPLTI A PF+ARL+E+AL EV GLVEAAQ+M Sbjct: 75 PFLVLMVAIIPVTKLIVGTFIGTTAAIVPLTIGAIPFVARLIESALLEVPTGLVEAAQSM 134 Query: 127 GATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYGYQRFLP 186 GAT QII KVL+PEA I+ +TIT V+LV YSAMAG +GGGGLGD+ IRYG+ R+ Sbjct: 135 GATPLQIIRKVLLPEALPTILNSVTITLVTLVSYSAMAGTVGGGGLGDVAIRYGFHRYDI 194 Query: 187 EVMLAVVLILIVFVQLVQSLGDLLVRKLSHR 217 +M V++LIV VQ++QS+GD LVR++ HR Sbjct: 195 TIMAVTVVMLIVLVQIIQSIGDALVRRVDHR 225 >BMEII0336 [P] COG2011 ABC-type metal ion transport system, permease component Bme Brucella melitensis Length = 230 Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 122/217 (56%), Positives = 163/217 (75%) Query: 1 MSSELIDLFVSSFGETLMMVVISGVVGSLLGIPLGIALHITEAKGVLPNVAFNRIAGLLV 60 MS ++DL SF ET++M S ++ ++G+PL + + +TE G+ N+ N I G ++ Sbjct: 10 MSQAMLDLLWRSFWETIIMAGFSSLISLVVGLPLALIMILTERGGLAQNLTLNTILGAII 69 Query: 61 NAVRSTPFIILLVAVIPMTRFFVGTSIGTAAAIVPLTIAAAPFIARLVETALREVDHGLV 120 N RS PFIILLVA+IP+TRF VGTSIGT A+IVPL+IAA P+ AR+ E +LREVDHGL+ Sbjct: 70 NGFRSVPFIILLVALIPVTRFIVGTSIGTWASIVPLSIAAIPYYARIAEVSLREVDHGLI 129 Query: 121 EAAQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180 EAA++MGA W I+ +VL+PEA GI+AG T+T ++L+G SAMAGAIG GGLGDL IRYG Sbjct: 130 EAARSMGANRWTIVREVLIPEALPGIIAGFTVTVITLIGASAMAGAIGAGGLGDLAIRYG 189 Query: 181 YQRFLPEVMLAVVLILIVFVQLVQSLGDLLVRKLSHR 217 YQRF +VM+AVV+ILI+ V +Q +GD LV +L R Sbjct: 190 YQRFETQVMIAVVIILIIMVCGIQWVGDRLVNRLDKR 226 >mll4791 [P] COG2011 ABC-type metal ion transport system, permease component Mlo Mesorhizobium loti Length = 218 Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 126/217 (58%), Positives = 158/217 (72%) Query: 1 MSSELIDLFVSSFGETLMMVVISGVVGSLLGIPLGIALHITEAKGVLPNVAFNRIAGLLV 60 MS L +L + S ET++M SG++ + G+PL +AL TE G+ ++ NR+ G ++ Sbjct: 1 MSPILFELLLRSIWETVLMTAASGLISLVFGLPLCLALISTERGGIAESLWVNRVLGAII 60 Query: 61 NAVRSTPFIILLVAVIPMTRFFVGTSIGTAAAIVPLTIAAAPFIARLVETALREVDHGLV 120 N RS PFIILLVA+IP+TR VGTSIGT AAIVPL+IAA P+ AR+ E +LREVD GL+ Sbjct: 61 NGFRSVPFIILLVALIPLTRLIVGTSIGTWAAIVPLSIAATPYYARIAEVSLREVDPGLI 120 Query: 121 EAAQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180 EAA+AMG W II +VLVPEA GIVAG T+T V+L+G SAMAGAIG GGLGDL IRYG Sbjct: 121 EAARAMGGNRWTIIREVLVPEALPGIVAGFTVTLVTLIGASAMAGAIGAGGLGDLAIRYG 180 Query: 181 YQRFLPEVMLAVVLILIVFVQLVQSLGDLLVRKLSHR 217 YQRF VM+AVV++LI+ V VQ GD LV +L R Sbjct: 181 YQRFETSVMVAVVIVLIILVCGVQWAGDRLVARLDRR 217 >AGl763 [P] COG2011 ABC-type metal ion transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 222 Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 137/218 (62%), Positives = 167/218 (76%), Gaps = 1/218 (0%) Query: 1 MSSELI-DLFVSSFGETLMMVVISGVVGSLLGIPLGIALHITEAKGVLPNVAFNRIAGLL 59 MS ++I +L +TL MV ++G+VGS++G+P+G+ L + + P NRI GL+ Sbjct: 1 MSPDMIFNLLFKGLWQTLHMVAVAGIVGSIIGVPMGVFLATSGKGELFPAPMTNRILGLI 60 Query: 60 VNAVRSTPFIILLVAVIPMTRFFVGTSIGTAAAIVPLTIAAAPFIARLVETALREVDHGL 119 VNA RSTPFIIL+VA+IP TR GTSIGT+AAIVPLT+A PFIARLVE A+REVD GL Sbjct: 61 VNAARSTPFIILVVAIIPFTRLVAGTSIGTSAAIVPLTVATVPFIARLVEAAIREVDKGL 120 Query: 120 VEAAQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRY 179 +EAA+AMGAT QI+ KVL+ EA GI LT+T VSL+GYSAM GA+GGGGLGDLGIRY Sbjct: 121 IEAARAMGATPLQIVTKVLLAEAKPGITLALTLTLVSLIGYSAMVGAVGGGGLGDLGIRY 180 Query: 180 GYQRFLPEVMLAVVLILIVFVQLVQSLGDLLVRKLSHR 217 GYQRF+P+VMLAVVL+LIV VQLVQS GD L R R Sbjct: 181 GYQRFMPDVMLAVVLVLIVLVQLVQSAGDRLARSFDKR 218 >FN0659 [P] COG2011 ABC-type metal ion transport system, permease component Fnu Fusobacterium nucleatum Length = 233 Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 103/203 (50%), Positives = 154/203 (75%) Query: 15 ETLMMVVISGVVGSLLGIPLGIALHITEAKGVLPNVAFNRIAGLLVNAVRSTPFIILLVA 74 ET+ MV +S + LLG P+G+ L IT+ G+ FN I G+++NA+RS PFIIL++ Sbjct: 28 ETIYMVFLSTIFSLLLGFPIGVLLVITKEDGIYEMKKFNAILGVIINALRSFPFIILMIL 87 Query: 75 VIPMTRFFVGTSIGTAAAIVPLTIAAAPFIARLVETALREVDHGLVEAAQAMGATTWQII 134 + P++RF VG++IG AAIVPL+I AAPF+AR+VE AL EVD+GL+EA+Q+MGA+ II Sbjct: 88 LFPLSRFVVGSTIGATAAIVPLSIGAAPFVARIVEGALLEVDYGLIEASQSMGASNSTII 147 Query: 135 YKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYGYQRFLPEVMLAVVL 194 +KV++PE ++ +V G+ +T +SL+GYSAMAG IG GGLGDL IR+GY RF ++M+ ++ Sbjct: 148 FKVMLPECYSTLVHGIIVTIISLIGYSAMAGTIGAGGLGDLAIRFGYLRFKLDIMIYAII 207 Query: 195 ILIVFVQLVQSLGDLLVRKLSHR 217 I+I+ VQ++QS+G+ +V + + Sbjct: 208 IIIILVQVIQSVGNYIVYRRQKK 230 >SMc03158 [P] COG2011 ABC-type metal ion transport system, permease component Sme Sinorhizobium meliloti Length = 221 Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 137/220 (62%), Positives = 170/220 (77%), Gaps = 6/220 (2%) Query: 1 MSSELIDLFVSSFGETLMMVVISGVVGSLLGIPLGIALHITEAKGVL---PNVAFNRIAG 57 MS +L+ S+ +T+ MV I+G+VGSL+G+P+GI L T KG L PNV NR G Sbjct: 1 MSPDLLLRIGSATLDTMYMVAIAGLVGSLIGLPIGIFLA-TSGKGELFPAPNV--NRAVG 57 Query: 58 LLVNAVRSTPFIILLVAVIPMTRFFVGTSIGTAAAIVPLTIAAAPFIARLVETALREVDH 117 L+VNA RSTPFIIL+VA+IP+TR GTSIGT AAIVPLTIA PF+ARLVE A+R+VD Sbjct: 58 LVVNATRSTPFIILVVAIIPLTRLITGTSIGTKAAIVPLTIATIPFVARLVEAAIRDVDK 117 Query: 118 GLVEAAQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGI 177 GL+EAA+AMGAT QI++KVL+ E+ + LT+T VSL+GYSAM GA+GGGGLGDLGI Sbjct: 118 GLIEAARAMGATPMQIVFKVLLAESRPALTLALTMTIVSLIGYSAMVGAVGGGGLGDLGI 177 Query: 178 RYGYQRFLPEVMLAVVLILIVFVQLVQSLGDLLVRKLSHR 217 RYGYQRF+P+VML VV++LIV VQLVQS GD + R+ R Sbjct: 178 RYGYQRFMPDVMLVVVVVLIVLVQLVQSAGDRMARRFDKR 217 >PA2351 [P] COG2011 ABC-type metal ion transport system, permease component Pae Pseudomonas aeruginosa Length = 217 Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 118/215 (54%), Positives = 147/215 (68%) Query: 3 SELIDLFVSSFGETLMMVVISGVVGSLLGIPLGIALHITEAKGVLPNVAFNRIAGLLVNA 62 S +++ F +TL+M+ S + L+GIPL + L T G+ NRI G LVN Sbjct: 2 SPMLERLWQGFLDTLLMIGASSAIVLLVGIPLALVLVTTGPGGIFEARLLNRILGGLVNV 61 Query: 63 VRSTPFIILLVAVIPMTRFFVGTSIGTAAAIVPLTIAAAPFIARLVETALREVDHGLVEA 122 +RS PF+IL+VA+IP TR VGTS G AA+VPLTIAA PF AR+ E +LREVDHGLVEA Sbjct: 62 LRSVPFLILMVALIPFTRMIVGTSYGVWAAVVPLTIAATPFFARIAEVSLREVDHGLVEA 121 Query: 123 AQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYGYQ 182 AQAMG II VL+PEA GIV G TIT V+++ SAMAGAIG GGLGDL RYGYQ Sbjct: 122 AQAMGCERRHIICNVLLPEARPGIVGGFTITLVTMINSSAMAGAIGAGGLGDLAYRYGYQ 181 Query: 183 RFLPEVMLAVVLILIVFVQLVQSLGDLLVRKLSHR 217 RF +VML V+++L++ V L+Q GD L R L+ R Sbjct: 182 RFDTQVMLTVIIVLVLLVTLIQFGGDRLARLLNKR 216 >YPO1319 [P] COG2011 ABC-type metal ion transport system, permease component Ype Yersinia pestis Length = 223 Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 116/215 (53%), Positives = 158/215 (73%) Query: 3 SELIDLFVSSFGETLMMVVISGVVGSLLGIPLGIALHITEAKGVLPNVAFNRIAGLLVNA 62 EL+ L ++ GET+ MV+I+ L+G+PLG+ L ++ GVLP N + G LVN Sbjct: 8 QELLVLVANASGETIYMVMIATFFTVLIGLPLGVLLFVSRPAGVLPAPRLNTLIGALVNV 67 Query: 63 VRSTPFIILLVAVIPMTRFFVGTSIGTAAAIVPLTIAAAPFIARLVETALREVDHGLVEA 122 RS PF++LL+A+IP+TR+ +GT++G+ AAIVP+T+ A PF AR+VE AL EVD G VEA Sbjct: 68 GRSMPFVVLLIALIPITRWIIGTTLGSTAAIVPITLGAIPFFARVVEAALDEVDKGRVEA 127 Query: 123 AQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYGYQ 182 +MG + +I KVL+PEA ++AG+T+T V LVG+S+MAG IGGGGLGDL IRYGYQ Sbjct: 128 ILSMGGSARHVIQKVLLPEALPALLAGITLTVVMLVGFSSMAGVIGGGGLGDLAIRYGYQ 187 Query: 183 RFLPEVMLAVVLILIVFVQLVQSLGDLLVRKLSHR 217 RF EVM+A ++IL++ VQ +QSLGD VR L+HR Sbjct: 188 RFNNEVMVATLVILVILVQGIQSLGDRWVRSLAHR 222 >XF0874 [P] COG2011 ABC-type metal ion transport system, permease component Xfa Xylella fastidiosa 9a5c Length = 235 Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 102/188 (54%), Positives = 135/188 (71%) Query: 30 LGIPLGIALHITEAKGVLPNVAFNRIAGLLVNAVRSTPFIILLVAVIPMTRFFVGTSIGT 89 LG+PLGIAL++ + + + L VN +RS PFIIL++ +IP+T +GTS+G Sbjct: 48 LGLPLGIALYLCNTSQLRSHPLVYTLLALAVNLLRSVPFIILMITMIPVTLLIMGTSLGI 107 Query: 90 AAAIVPLTIAAAPFIARLVETALREVDHGLVEAAQAMGATTWQIIYKVLVPEAFAGIVAG 149 AI+PL I AAPF ARLVE+ALREVD G+VEAAQAMGATTWQ+I++VL+PEA G++AG Sbjct: 108 RGAILPLVIGAAPFYARLVESALREVDRGVVEAAQAMGATTWQLIWRVLLPEARPGLIAG 167 Query: 150 LTITFVSLVGYSAMAGAIGGGGLGDLGIRYGYQRFLPEVMLAVVLILIVFVQLVQSLGDL 209 TIT +++VG++AM GAIG GGLGD+ R GY R +V L V+ L++ VQL+Q GD Sbjct: 168 ATITGIAVVGFTAMGGAIGSGGLGDVAYREGYLRSHTDVALVTVIALLMVVQLIQMFGDW 227 Query: 210 LVRKLSHR 217 LV S R Sbjct: 228 LVAHYSRR 235