BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0054.p (221 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp0675 Non COG 249 3e-66 YPO2970 [S] COG4380 Uncharacterized protein conserved in bacteri... 245 5e-65 NMB1162 [S] COG4380 Uncharacterized protein conserved in bacteri... 201 9e-52 NMB1124 [S] COG4380 Uncharacterized protein conserved in bacteri... 201 9e-52 NMA1332 [S] COG4380 Uncharacterized protein conserved in bacteri... 201 9e-52 PA0047 [S] COG4380 Uncharacterized protein conserved in bacteria... 196 2e-50 >RSp0675 Non COG Length = 223 Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 125/224 (55%), Positives = 160/224 (71%), Gaps = 4/224 (1%) Query: 1 MIARKCKVLAAAMLVLLATGCATQPQKSYDYAEFKAARPASILVLPPVNTSSEVIAPYGV 60 M R K+ AA +V L GCA P K DYA FKA++P SI+VLPP+N S +V A YG+ Sbjct: 1 MAKRFLKLFAAIGVVALMAGCAA-PAKHVDYAAFKASKPRSIVVLPPLNQSPDVKATYGM 59 Query: 61 LAQATEPLAESGYYVIPVSLAAATFRQNGLSNPDEIHELPAPKLREIFGADAALYIKITR 120 L+Q T+PLAE+GYYV+PV+L TFRQNGL+ +IH +P KL++IFGADAALY+ IT+ Sbjct: 60 LSQVTKPLAEAGYYVLPVALVDETFRQNGLTTAGDIHGVPVAKLKDIFGADAALYVTITQ 119 Query: 121 YGTSYQVVQSETLVAAEARLVDLRSGKLLWEGSARASSLEQQQQ---NSNGLIGMLVSAV 177 YGT Y ++ S T+VAA+A+LVDL+SG+ LW G A ASS E N+ G+IG+LVSA Sbjct: 120 YGTKYMLIDSVTVVAADAKLVDLKSGETLWTGHASASSKETGNSVDVNAGGIIGVLVSAA 179 Query: 178 INQIVNTTSDASYKMAGIASQRLLRAGNPNGLLHGPRSPQYQKD 221 + QIVNT D+ Y +AG S RLL AG GLL+GPRSP+Y D Sbjct: 180 VKQIVNTAIDSGYSVAGATSARLLSAGPHGGLLYGPRSPKYGTD 223 >YPO2970 [S] COG4380 Uncharacterized protein conserved in bacteria Ype Yersinia pestis Length = 218 Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 124/213 (58%), Positives = 157/213 (73%), Gaps = 3/213 (1%) Query: 9 LAAAMLVLLATGCATQPQKSYDYAEFKAARPASILVLPPVNTSSEVIAPYGVLAQATEPL 68 + A M+ LL TGCAT P + DY +FK ++P SILVL P N S EV A +GVL+Q T PL Sbjct: 7 VCAVMMALLLTGCAT-PVAT-DYTDFKQSKPKSILVLLPQNQSPEVDASHGVLSQVTYPL 64 Query: 69 AESGYYVIPVSLAAATFRQNGLSNPDEIHELPAPKLREIFGADAALYIKITRYGTSYQVV 128 AE+GYYV+PV++ TF+QNG++N +I KLR+IFGADA LYI I +YGTSYQV+ Sbjct: 65 AEAGYYVLPVAVVEETFKQNGMTNAGDISAASPAKLRQIFGADAVLYITIVQYGTSYQVI 124 Query: 129 QSETLVAAEARLVDLRSGKLLWEGSARASSLEQQQQNSNGLIGMLVSAVINQIVNTTSDA 188 S+T V A A+LVDL++GKLLW GSA ASS E +S G+IG+LV A ++QI NT +D Sbjct: 125 TSDTRVTANAKLVDLKTGKLLWSGSATASSNE-GNNSSGGVIGLLVQAAVSQIANTITDK 183 Query: 189 SYKMAGIASQRLLRAGNPNGLLHGPRSPQYQKD 221 S+ +AGI S R+L AG PNGLL+GPRSPQY KD Sbjct: 184 SHDVAGITSARMLSAGTPNGLLYGPRSPQYGKD 216 >NMB1162 [S] COG4380 Uncharacterized protein conserved in bacteria Nme Neisseria meningitidis MC58 Length = 215 Score = 201 bits (511), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 101/201 (50%), Positives = 136/201 (67%), Gaps = 4/201 (1%) Query: 15 VLLATGCATQPQKSYDYAEFKAARPASILVLPPVNTSSEVIAPYGVLAQATEPLAESGYY 74 VL + C Q +DY FK ++PASILV+PP+N S +V +GVLA PL+E+GYY Sbjct: 11 VLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDVNGTWGVLASTAAPLSEAGYY 70 Query: 75 VIPVSLAAATFRQNGLSNPDEIHELPAPKLREIFGADAALYIKITRYGTSYQVVQSETLV 134 V P ++ TF+QNGL+N +IH + KL +IFG DA LYI +T YGTSYQ++ S T V Sbjct: 71 VFPAAVVEETFKQNGLTNAADIHAVRPEKLHQIFGNDAVLYITVTEYGTSYQILDSVTTV 130 Query: 135 AAEARLVDLRSGKLLWEGSARASSLEQQQQNSN-GLIGMLVSAVINQIVNTTSDASYKMA 193 +A+ARLVD R+GK LW GSA S+ + NSN GL+G LVSAV+NQI N+ +D Y+++ Sbjct: 131 SAKARLVDSRNGKELWSGSA---SIREGSNNSNSGLLGALVSAVVNQIANSLTDRGYQVS 187 Query: 194 GIASQRLLRAGNPNGLLHGPR 214 A+ LL + NG+L GPR Sbjct: 188 KTAAYNLLSPYSHNGILKGPR 208 >NMB1124 [S] COG4380 Uncharacterized protein conserved in bacteria Nme Neisseria meningitidis MC58 Length = 215 Score = 201 bits (511), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 101/201 (50%), Positives = 136/201 (67%), Gaps = 4/201 (1%) Query: 15 VLLATGCATQPQKSYDYAEFKAARPASILVLPPVNTSSEVIAPYGVLAQATEPLAESGYY 74 VL + C Q +DY FK ++PASILV+PP+N S +V +GVLA PL+E+GYY Sbjct: 11 VLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDVNGTWGVLASTAAPLSEAGYY 70 Query: 75 VIPVSLAAATFRQNGLSNPDEIHELPAPKLREIFGADAALYIKITRYGTSYQVVQSETLV 134 V P ++ TF+QNGL+N +IH + KL +IFG DA LYI +T YGTSYQ++ S T V Sbjct: 71 VFPAAVVEETFKQNGLTNAADIHAVRPEKLHQIFGNDAVLYITVTEYGTSYQILDSVTTV 130 Query: 135 AAEARLVDLRSGKLLWEGSARASSLEQQQQNSN-GLIGMLVSAVINQIVNTTSDASYKMA 193 +A+ARLVD R+GK LW GSA S+ + NSN GL+G LVSAV+NQI N+ +D Y+++ Sbjct: 131 SAKARLVDSRNGKELWSGSA---SIREGSNNSNSGLLGALVSAVVNQIANSLTDRGYQVS 187 Query: 194 GIASQRLLRAGNPNGLLHGPR 214 A+ LL + NG+L GPR Sbjct: 188 KTAAYNLLSPYSHNGILKGPR 208 >NMA1332 [S] COG4380 Uncharacterized protein conserved in bacteria NmA Neisseria meningitidis Z2491 Length = 215 Score = 201 bits (511), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 101/201 (50%), Positives = 136/201 (67%), Gaps = 4/201 (1%) Query: 15 VLLATGCATQPQKSYDYAEFKAARPASILVLPPVNTSSEVIAPYGVLAQATEPLAESGYY 74 VL + C Q +DY FK ++PASILV+PP+N S +V +GVLA PL+E+GYY Sbjct: 11 VLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDVNGTWGVLASTAAPLSEAGYY 70 Query: 75 VIPVSLAAATFRQNGLSNPDEIHELPAPKLREIFGADAALYIKITRYGTSYQVVQSETLV 134 V P ++ TF+QNGL+N +IH + KL +IFG DA LYI +T YGTSYQ++ S T V Sbjct: 71 VFPAAVVEETFKQNGLTNAADIHAVRPEKLHQIFGNDAVLYITVTEYGTSYQILDSVTTV 130 Query: 135 AAEARLVDLRSGKLLWEGSARASSLEQQQQNSN-GLIGMLVSAVINQIVNTTSDASYKMA 193 +A+ARLVD R+GK LW GSA S+ + NSN GL+G LVSAV+NQI N+ +D Y+++ Sbjct: 131 SAKARLVDSRNGKELWSGSA---SIREGSNNSNSGLLGALVSAVVNQIANSLTDRGYQVS 187 Query: 194 GIASQRLLRAGNPNGLLHGPR 214 A+ LL + NG+L GPR Sbjct: 188 KTAAYNLLSPYSHNGILKGPR 208 >PA0047 [S] COG4380 Uncharacterized protein conserved in bacteria Pae Pseudomonas aeruginosa Length = 169 Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 95/167 (56%), Positives = 125/167 (74%), Gaps = 1/167 (0%) Query: 56 APYGVLAQATEPLAESGYYVIPVSLAAATFRQNGLSNPDEIHELPAPKLREIFGADAALY 115 A Y +L+Q T PLAE+GYYV+PV+LA TFRQNGL++ ++H++ KLREI+GADAALY Sbjct: 3 ATYSMLSQVTFPLAEAGYYVVPVALADETFRQNGLTSAGDVHQVSPAKLREIYGADAALY 62 Query: 116 IKITRYGTSYQVVQSETLVAAEARLVDLRSGKLLWEGSARASSLEQQQQNSNGLIGMLVS 175 + ++ YGT Y V+ S T+V A A+LVDLRSG LW GSA ASS E N+ GL+GML++ Sbjct: 63 VTVSDYGTRYMVISSATIVTASAKLVDLRSGTTLWTGSATASSEEGNGGNNGGLVGMLIT 122 Query: 176 AVINQIVNTT-SDASYKMAGIASQRLLRAGNPNGLLHGPRSPQYQKD 221 A + QI+N++ DA Y +AG+ S RLL AG P GLL+GPRSP+Y D Sbjct: 123 AAVKQIINSSVEDAGYPIAGMTSARLLSAGQPGGLLYGPRSPRYGSD 169