BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0037.p (455 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0584 Non COG 350 5e-96 PA3047 [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicill... 314 3e-85 NMA0665 [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicil... 205 2e-52 NMB1797 [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicil... 201 3e-51 YPO3506 [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicil... 137 4e-32 XF1614 [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicill... 134 6e-31 STM3300 [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicil... 128 3e-29 dacB [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin... 124 3e-28 ZdacB [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicilli... 123 1e-27 ECs4061 [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicil... 123 1e-27 >RSc0584 Non COG Length = 514 Score = 350 bits (897), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 196/453 (43%), Positives = 266/453 (58%), Gaps = 11/453 (2%) Query: 9 LPPAVVGALRVAHIPQQNTGVLVIDTEGSKRVLVSNNIAQPFNPASVMKLVTTDAALEML 68 LP V A AHIP V VI T G+ ++ N NPAS MKL+TT A L++L Sbjct: 61 LPANVALAFARAHIPLDAVSVFVIRT-GTATPILQWNADAGMNPASTMKLLTTFAGLDLL 119 Query: 69 GPTFTWKTQAYIDGTLSGGVLNGDLILKGGGDPKLVLENFWLLLRQLRARGIQDIRGKLV 128 GP F WKT AY D +GGVL+G+L L+G GDPKL+ E L+ +R G+ ++ G +V Sbjct: 120 GPDFRWKTSAYADRPPAGGVLSGNLYLRGQGDPKLIPEELIKLVTDVRRAGVDELAGNIV 179 Query: 129 LDRSYFASSSYDPAQFDGDPQKPYNAGPDALLLNYRTQAFRFEPDAASGTVSVSMDPPMA 188 LDRSYF + D DGD + YN PDALL ++T F PDAA+G V+V + PP+A Sbjct: 180 LDRSYFENGLSDAPPLDGDTGRAYNVAPDALLYAFKTLTFTLAPDAATGAVNVDVSPPLA 239 Query: 189 GFTI-TPPRLSQEPCGDWQGKLMLN--NDASG---ATFSGSYSADCGARVWYVHPYRMSN 242 + ++ CGDW+ + A G A+F G Y+ CG R++ V +++ Sbjct: 240 QLQVDNQLHVTHGNCGDWRSHANFDIATQADGTVRASFDGRYAGACGERIFNVAA--LTH 297 Query: 243 VQYVGASFAQMWADLGGRFAGR--VLDGQVTPSARMMVEVQSPALPEVIRDINKYSNNVM 300 ++ F +W GG F + +G+V A ++ P L EV+ DI+KYSNNVM Sbjct: 298 ADFIWGGFLALWRQAGGTFRATPGLREGKVPHPAVLLATHYGPTLAEVVHDIDKYSNNVM 357 Query: 301 ARQVLLTLGAEMTGQPGDPVNAARAVRGWLGDKGIDTNGLAIENGAGLSRIERVTPGLLA 360 ARQ+ LT+GAE+ +P +A + WL + + L +ENG+GLSRIER++ L Sbjct: 358 ARQLFLTIGAEIGRKPASVQQSADIISRWLARQNLSMPELVLENGSGLSRIERISARNLG 417 Query: 361 NVLLQTWRSPLMPEFVSSLPLVGYDGTMRRRLKTQGVAGQAHIKTGTLNDVRSIAGYVQA 420 +L Q +P +LP+VG DGTMR RL GVAG A IKTGTLNDVR+IAGYV+ Sbjct: 418 RLLQQADANPNGAILRDALPVVGVDGTMRNRLTRAGVAGNAEIKTGTLNDVRAIAGYVEG 477 Query: 421 ASGKTYVVVFLINHPAAPNGQKAQDALLQWVYE 453 G+ YVVV +INHP+A GQ A DALLQW+Y+ Sbjct: 478 EGGQRYVVVSMINHPSAGGGQAAHDALLQWIYQ 510 >PA3047 [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) Pae Pseudomonas aeruginosa Length = 476 Score = 314 bits (804), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 189/447 (42%), Positives = 249/447 (55%), Gaps = 36/447 (8%) Query: 8 SLPPAVVGALRVAHIPQQNTGVLVIDTEGSKRVLVSNNIAQPFNPASVMKLVTTDAALEM 67 +LP V AL+ + + +++I +G N NPAS MKL TT AALEM Sbjct: 27 TLPANVQKALQTNKLTGNDLSLVLIPLDGPGNPTYYNADVS-VNPASTMKLFTTYAALEM 85 Query: 68 LGPTFTWKTQAYIDGTLSGGVLNGDLILKGGGDPKLVLENFWLLLRQLRARGIQDIRGKL 127 LGPT+ WKT+ Y DG L GVLNG+L LKGGGDPKL +E WLL+R LRA G+ + G L Sbjct: 86 LGPTYQWKTEFYTDGQLKNGVLNGNLYLKGGGDPKLNMEKLWLLMRDLRANGVTKVTGDL 145 Query: 128 VLDRSYFASSSYDPAQFDG-DPQKPYNAGPDALLLNYRTQAFRFEPDAASGTVSVSMDPP 186 VLDRSYF DG D KP+ GPD+LL+N ++ D V+V MDPP Sbjct: 146 VLDRSYFNIPQLPVFNDDGGDDTKPFLVGPDSLLVNLKSVRMVVRTDG--NKVNVQMDPP 203 Query: 187 MAGFTITP-------------PRLSQEPCGDWQGKLMLNNDASGATFSGSYSADCGARVW 233 +A I P+L P + G +L +G C A+ + Sbjct: 204 LANVRIDNQVKMTAPATCPAWPKLRFSPVTQFDGTTLLA--------TGQIPQGCSAQTY 255 Query: 234 YV---HPYRMSNVQYVGASFAQMWADLGGRFAGRVLDGQVTPSARMMVEVQSPALPEVIR 290 HP Y + +W +LGG G+ G V +A ++ + SP L E+IR Sbjct: 256 MSLLDHP------GYTAGAVRGIWQELGGSILGKDRQGSVPRNATLIAKAFSPDLVEIIR 309 Query: 291 DINKYSNNVMARQVLLTLGAEMTGQP-GDPVNAA-RAVRGWLGDKGIDTNGLAIENGAGL 348 DINKYSNN MARQ+ L++GA+ GD AA R VR WL KGI L +ENG+GL Sbjct: 310 DINKYSNNTMARQLFLSIGAQFRNSADGDDAQAAQRVVRQWLARKGITAPRLVMENGSGL 369 Query: 349 SRIERVTPGLLANVLLQTWRSPLMPEFVSSLPLVGYDGTMRRRLKTQGVAGQAHIKTGTL 408 SR ERV+ +A +L W SP E++SSLPL G DGTMR+RL+ + G+AH+KTGTL Sbjct: 370 SRQERVSAREMAAMLQAAWHSPYAAEYISSLPLAGLDGTMRKRLRRTALVGEAHVKTGTL 429 Query: 409 NDVRSIAGYVQAASGKTYVVVFLINHP 435 N VR++AG+ + ASG +VVV ++N P Sbjct: 430 NTVRALAGFSRDASGHNWVVVAILNSP 456 >NMA0665 [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) NmA Neisseria meningitidis Z2491 Length = 469 Score = 205 bits (521), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 142/419 (33%), Positives = 208/419 (49%), Gaps = 19/419 (4%) Query: 21 HIPQQNTGVLVIDTEGSKRVLVSNNIAQPFNPASVMKLVTTDAALEMLGPTFTWKTQAYI 80 IPQ V V + + S +V++ + P NPAS MKLVT AA + G + W T+ Sbjct: 26 RIPQNEIAVYVQELD-SGKVIIDHRSDVPVNPASTMKLVTAFAAFKTFGSNYRWATEFKS 84 Query: 81 DGTLSGGVLNGDLILKGGGDPKLVLENFWLLLRQLRARGIQDIRGKLVLDRSYFASSSYD 140 +GT++ G L+G+L G GDP EN + RQLR +GI++I G L+LD S + Sbjct: 85 NGTVNDGTLDGNLYWAGSGDPVFNQENLLAVQRQLREQGIRNITGHLMLDHSLWGEVG-S 143 Query: 141 PAQFDGDPQKPYNAGPDALLLNYRTQAFRFEPDAASGTVSVSMDPPM------AGFTITP 194 P F+ D P+ P+ +L+ R E +AA T + DPP+ IT Sbjct: 144 PDDFEADSGSPFMTPPNPTMLSAGMVMVRAERNAADST-DILTDPPLPHIFAQNNLKITA 202 Query: 195 PRLSQEPCGDWQGKLMLNNDASGATFSGSYSADCGARVWYVHPYRMSNVQYVGASFAQMW 254 SQ C + + + + G+ C + V + + + + SF W Sbjct: 203 ---SQAACPSIKKLMRASFSDNTLKLRGNIPESCLGKPVGVRMFALD--ELIRQSFTNHW 257 Query: 255 ADLGGRFAGRVLDGQVTPSARMMVEVQSPALPEVIRDINKYSNNVMARQVLLTLGAEMTG 314 GGR + + A+ + S + E++ D+NK S+N++AR V L LG + Sbjct: 258 LLGGGRISDGIGISDTPEGAQTLAVAHSKPMKEILTDMNKRSDNLIARSVFLKLGGD-GK 316 Query: 315 QPGDPVNAARAVRGWLGDKGIDTNGLAIENGAGLSRIERVTPGLLANVLLQTWRSPLMPE 374 P AA AVR L GID L +ENG+GLSR ERVT ++A +L + SP + Sbjct: 317 LPAVSEQAASAVRRELAVSGIDVADLVLENGSGLSRKERVTARMMAQMLETAYFSPFAQD 376 Query: 375 FVSSLPLVGYDGTMRRRLKTQGVAGQAHIKTGTLNDVRSIAGYVQAASGKTYVVVFLIN 433 F+ +LP+ G DGT+R R K G G +KTGTLN+VR++AGY K VV +IN Sbjct: 377 FIDTLPIAGTDGTLRNRFKQSG--GLLRLKTGTLNNVRALAGY--WLGDKPMAVVVIIN 431 >NMB1797 [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) Nme Neisseria meningitidis MC58 Length = 469 Score = 201 bits (510), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 140/419 (33%), Positives = 207/419 (49%), Gaps = 19/419 (4%) Query: 21 HIPQQNTGVLVIDTEGSKRVLVSNNIAQPFNPASVMKLVTTDAALEMLGPTFTWKTQAYI 80 IPQ V V + + S +V++ + P NPAS MKLVT AA + G + W T+ Sbjct: 26 RIPQNEIAVYVQELD-SGKVIIDHRSDVPVNPASTMKLVTAFAAFKTFGSNYRWATEFKS 84 Query: 81 DGTLSGGVLNGDLILKGGGDPKLVLENFWLLLRQLRARGIQDIRGKLVLDRSYFASSSYD 140 +GT++ G L+G+L G GDP EN +QLR +GI +I G L+LD S + Sbjct: 85 NGTVNDGTLDGNLYWAGSGDPVFNQENLLDAQKQLREQGILNITGHLMLDHSLWGEVG-S 143 Query: 141 PAQFDGDPQKPYNAGPDALLLNYRTQAFRFEPDAASGTVSVSMDPPM------AGFTITP 194 P F+ D P+ P+ +L+ R E +AA G+ + DPP+ IT Sbjct: 144 PDDFEADSGSPFMTPPNPTMLSAGMVMVRAERNAA-GSTDILTDPPLPHIFAQNNLKITA 202 Query: 195 PRLSQEPCGDWQGKLMLNNDASGATFSGSYSADCGARVWYVHPYRMSNVQYVGASFAQMW 254 SQ C + + + + G+ C + V + + + + SF W Sbjct: 203 ---SQAACPSIKKLMRASFSDNTLKLRGNIPESCLGKPVGVRMFALD--ELIRQSFTNHW 257 Query: 255 ADLGGRFAGRVLDGQVTPSARMMVEVQSPALPEVIRDINKYSNNVMARQVLLTLGAEMTG 314 GGR + + A+ + + + E++ D+NK S+N++AR V L LG + Sbjct: 258 LLGGGRISDGIGIADTPEGAQTLAVAHAKPMKEILTDMNKRSDNLIARSVFLKLGGD-GK 316 Query: 315 QPGDPVNAARAVRGWLGDKGIDTNGLAIENGAGLSRIERVTPGLLANVLLQTWRSPLMPE 374 P AA AVR L GID L +ENG+GLSR ERVT ++A +L + SP + Sbjct: 317 LPAVSEQAASAVRRELAVSGIDVADLVLENGSGLSRKERVTARMMAQMLETAYFSPFAQD 376 Query: 375 FVSSLPLVGYDGTMRRRLKTQGVAGQAHIKTGTLNDVRSIAGYVQAASGKTYVVVFLIN 433 F+ +LP+ G DGT+R R K G G +KTGTLN+VR++AGY K VV +IN Sbjct: 377 FIDTLPIAGTDGTLRNRFKQSG--GLLRLKTGTLNNVRALAGY--WLGDKPMAVVVIIN 431 >YPO3506 [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) Ype Yersinia pestis Length = 482 Score = 137 bits (346), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 126/455 (27%), Positives = 211/455 (46%), Gaps = 28/455 (6%) Query: 21 HIPQQNTGVLVIDTEGSKRVLVSNNIAQPFNPASVMKLVTTDAALEMLGPTFTWKTQAYI 80 ++P L++ G+ + + Q PAS K++T AAL LGP F + T Sbjct: 34 YLPDGANLALMVQKIGASTPAIDYHAQQMALPASTQKVLTALAALLQLGPDFRFNTTLES 93 Query: 81 DGTLSGGVLNGDLILKGGGDPKLVLENFWLLLRQLRARGIQDIRGKLVLDRSYFASSSYD 140 GT++ GVL G+LI + GGDP L + ++ LR G++ I G +V+D S FAS Sbjct: 94 HGTITDGVLRGNLIARFGGDPTLTRQQLRNMVATLRKAGVKQIAGDVVIDTSVFASHDKA 153 Query: 141 PAQFDGDPQKPYNAGPDALLLN---YRTQAFRFEPDAASGTVSVSMDPPMAGFTITPPRL 197 P D + ++A P A +++ + + + + V+ P+ F+ Sbjct: 154 PGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPNPGDTAFIRVASYYPVQMFSEVRTLA 213 Query: 198 SQEPCGDWQGKLMLNNDASGATFSGSYSADCGARVWYVHPYRMSNVQYVGASFAQMWADL 257 P + ++ + + T +G + P ++ GAS+A Sbjct: 214 KGSPDAQYCELDVVPGELNRFTLTGCLTQRS-------EPLPLAFAVQNGASYAGAILKD 266 Query: 258 GGRFAGRVLDGQV------TPSARMMVEVQSPALPEVIRDINKYSNNVMARQVLLTLGAE 311 + A +DG + +P+ ++ + QS L ++++ + K S+N++A V T+G + Sbjct: 267 ELKKADIQIDGNLRRQTIPSPAGNVLAQTQSAPLHDLLKIMLKKSDNMIADTVFRTIGHQ 326 Query: 312 MTGQPGDPVNAARAVRGWLGDK-GIDTNGLAIENGAGLSRIERVTPGLLANVLLQTWRSP 370 G PG + A AVR L K G+D + +G+GLSR ++P + VL ++ Sbjct: 327 RFGVPGTWRSGADAVRQILRQKAGVDLGNSIVVDGSGLSRHNLISPATMMQVLQYIAQND 386 Query: 371 LMPEFVSSLPLVGYDGTMRRR--LKTQGVAGQAHIKTGTLNDVRSIAGYVQAASGKTYVV 428 F+S LPL GYDGT+R R L GV G+ KTG L V ++AG++ ASG+ Sbjct: 387 QELNFISMLPLAGYDGTLRYRGGLHEAGVNGKVSAKTGALQGVYNLAGFITTASGQRMAF 446 Query: 429 V-FLINHPAAPNGQKAQDA--------LLQWVYEN 454 V FL + P QK + A L + +Y+N Sbjct: 447 VQFLSGYAVPPEDQKNRRAPLVRFESRLYKDIYQN 481 >XF1614 [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) Xfa Xylella fastidiosa 9a5c Length = 494 Score = 134 bits (336), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 123/413 (29%), Positives = 185/413 (44%), Gaps = 30/413 (7%) Query: 40 VLVSNNIAQPFNPASVMKLVTTDAALEMLGPTFTWKTQAYIDGTLSGGVLNGDLILKGGG 99 VL + N PAS +KLVT +A +LG + ++T DGT G L+G+L LK G Sbjct: 71 VLYARNTGSRTFPASNLKLVTLYSAFSVLGSDYKFETILMTDGTQKKGHLSGNLYLKEIG 130 Query: 100 DPKLVLENFWLLLRQLRARGIQDIRGKLVLDRSYFASSSYDPAQFDGDPQKPYNAGPDAL 159 DP L +++ L L ARGI+ I G LVLD + F S + D K + A Sbjct: 131 DPTLSADDYDKLANDLAARGIRKIDGNLVLDDTSFDSIALCLGWMIDDEDKYFEA----- 185 Query: 160 LLNYRTQAFRFEPDAASGTVSVSMDPPMAGFTITPPRLSQEPCGDWQGKLMLNNDASGAT 219 + A F P+A +V +D A + ++ P + M+N +G T Sbjct: 186 ----QISALTFSPNADFNAGAVIIDVSAARTGNSTTEITVLPRNNVVK--MINRVVNGNT 239 Query: 220 FSGSYSADCGARVWYVHPYRMS--NVQ----------YVGASFAQMWADLGGRFAGRVLD 267 + + S G+ YV + ++Q V F G AG + Sbjct: 240 SAITVSRARGSNDIYVSGTVKAGDSIQELCSVWMPSLIVSDIFQSALKRHGIEVAGHAVV 299 Query: 268 GQVTP-SARMMVEVQSPALPEVIRDINKYSNNVMARQVLLTLGAEMTGQPGDPVNAARAV 326 GQ TP A M+V QS L ++ + K SNN MA L ++G + Q G +A Sbjct: 300 GQATPMQALMLVRRQSAPLESLVIPLMKLSNNTMAEIFLKSIGRKSLNQ-GSASAGIQAT 358 Query: 327 RGWLGDKGIDTNGLAIENGAGLSRIERVTPGLLANVLLQTWRSPLMPEFVSSLPLVG--- 383 G L GI++ L +G+ LSR + +L ++LL + P F +SLP+ G Sbjct: 359 LGVLAMDGINSESLVQVDGSDLSRYNLIASRILTDILLAARKKPWFAAFYASLPVAGQPD 418 Query: 384 --YDGTMRRRLKTQGVAGQAHIKTGTLNDVRSIAGYVQAASGKTYVVVFLINH 434 GT+R R++ G+ KTG+L + S++GYV AA V L+N+ Sbjct: 419 RLIGGTLRNRMRGTAAEGKVIAKTGSLTGISSLSGYVTAADEYPLVFSILLNN 471 >STM3300 [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) Sty Salmonella typhimurium LT2 Length = 477 Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 113/398 (28%), Positives = 184/398 (46%), Gaps = 17/398 (4%) Query: 52 PASVMKLVTTDAALEMLGPTFTWKTQAYIDGTLSGGVLNGDLILKGGGDPKLVLENFWLL 111 PAS K++T AAL LGP F + T G + G+L GD+I + GGDP L ++ + Sbjct: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVDNGILKGDVIARFGGDPTLKRQDIRNM 119 Query: 112 LRQLRARGIQDIRGKLVLDRSYFASSSYDPAQFDGDPQKPYNAGPDALLLN---YRTQAF 168 + L+ G+ I G +++D S FAS P D + ++A P A +++ + + Sbjct: 120 VATLKKSGVTQIDGNVLIDTSIFASHDKAPGWPWNDLTQCFSAPPAAAIVDRNCFSVSLY 179 Query: 169 RFEPDAASGTVSVSMDPPMAGFTI--TPPRLSQEPCGDWQGKLMLNNDASGATFSGSY-- 224 + + V+ P+ F+ T PR S + + ++ D + T +G Sbjct: 180 SAQKPNDLAFIRVASYYPVTMFSQVRTLPRGSAD--AQYCELDVVPGDLNRYTLTGCLPQ 237 Query: 225 SADCGARVWYVHPYRMSNVQYVGASFAQMWADLGGRFAGRVL-DGQVTPSARMMVEVQSP 283 AD + + Y GA Q + G + G +L QV ++ QS Sbjct: 238 RADPLPLAFAIQ----DGASYAGAILKQELKEAGITYRGTLLRQTQVNEPGTIVASKQSA 293 Query: 284 ALPEVIRDINKYSNNVMARQVLLTLGAEMTGQPGDPVNAARAVRGWLGDK-GIDTNGLAI 342 L ++++ + K S+N++A V +G PG + AVR L + GID I Sbjct: 294 PLHDLLKIMLKKSDNMIADTVFRMIGHVRFNVPGTWRAGSDAVRQILRQQAGIDIGNTII 353 Query: 343 ENGAGLSRIERVTPGLLANVLLQTWRSPLMPEFVSSLPLVGYDGTMRRR--LKTQGVAGQ 400 +G+GLSR + P + VL + F+S LPL GYDG+++ R L GV G+ Sbjct: 354 ADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGK 413 Query: 401 AHIKTGTLNDVRSIAGYVQAASGKTYVVVFLINHPAAP 438 KTG+L V ++AG++ ASG+ V ++ A P Sbjct: 414 VSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVP 451 >dacB [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) Eco Escherichia coli K12 Length = 477 Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 118/437 (27%), Positives = 194/437 (44%), Gaps = 20/437 (4%) Query: 19 VAHIPQQNTGVLVIDTEGSKRVLVSNNIAQPFNPASVMKLVTTDAALEMLGPTFTWKTQA 78 + +P L++ G+ + + Q PAS K++T AAL LGP F + T Sbjct: 27 ITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTL 86 Query: 79 YIDGTLSGGVLNGDLILKGGGDPKLVLENFWLLLRQLRARGIQDIRGKLVLDRSYFASSS 138 G + GVL GDL+ + G DP L ++ ++ L+ G+ I G +++D S FAS Sbjct: 87 ETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHD 146 Query: 139 YDPAQFDGDPQKPYNAGPDALLLNYRTQAFRFEPDAASGT---VSVSMDPPMAGFTI--T 193 P D + ++A P A +++ + G + V+ P+ F+ T Sbjct: 147 KAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRT 206 Query: 194 PPRLSQEPCGDWQGKLMLNNDASGATFSGSYSADCGARVWYVHPYRMS---NVQYVGASF 250 PR S E + ++ D + T +G C + P + Y GA Sbjct: 207 LPRGSAE--AQYCELDVVPGDLNRFTLTG-----CLPQRSEPLPLAFAVQDGASYAGAIL 259 Query: 251 AQMWADLGGRFAGRVL-DGQVTPSARMMVEVQSPALPEVIRDINKYSNNVMARQVLLTLG 309 G ++G +L QV ++ QS L ++++ + K S+N++A V +G Sbjct: 260 KDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG 319 Query: 310 AEMTGQPGDPVNAARAVRGWLGDK-GIDTNGLAIENGAGLSRIERVTPGLLANVLLQTWR 368 PG + AVR L + G+D I +G+GLSR + P + VL + Sbjct: 320 HARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQ 379 Query: 369 SPLMPEFVSSLPLVGYDGTMRRR--LKTQGVAGQAHIKTGTLNDVRSIAGYVQAASGKTY 426 F+S LPL GYDG+++ R L GV G+ KTG+L V ++AG++ ASG+ Sbjct: 380 HDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRM 439 Query: 427 VVV-FLINHPAAPNGQK 442 V +L + P Q+ Sbjct: 440 AFVQYLSGYAVEPADQR 456 >ZdacB [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) EcZ Escherichia coli O157:H7 EDL933 Length = 477 Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 117/437 (26%), Positives = 193/437 (44%), Gaps = 20/437 (4%) Query: 19 VAHIPQQNTGVLVIDTEGSKRVLVSNNIAQPFNPASVMKLVTTDAALEMLGPTFTWKTQA 78 + +P L++ G+ + + Q PAS K++T AAL LGP F + T Sbjct: 27 ITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTL 86 Query: 79 YIDGTLSGGVLNGDLILKGGGDPKLVLENFWLLLRQLRARGIQDIRGKLVLDRSYFASSS 138 G + GVL GDL+ + G DP L ++ ++ L+ G+ I G +++D S FAS Sbjct: 87 ETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHD 146 Query: 139 YDPAQFDGDPQKPYNAGPDALLLNYRTQAFRFEPDAASGT---VSVSMDPPMAGFTI--T 193 P D + ++A P +++ + G + V+ P+ F+ T Sbjct: 147 KAPGWPWNDMTQCFSAPPAVAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRT 206 Query: 194 PPRLSQEPCGDWQGKLMLNNDASGATFSGSYSADCGARVWYVHPYRMS---NVQYVGASF 250 PR S E + ++ D + T +G C + P + Y GA Sbjct: 207 LPRGSAE--AQYCELDVVPGDLNRFTLTG-----CLPQRSEPLPLAFAVQDGASYAGAIL 259 Query: 251 AQMWADLGGRFAGRVL-DGQVTPSARMMVEVQSPALPEVIRDINKYSNNVMARQVLLTLG 309 G ++G +L QV ++ QS L ++++ + K S+N++A V +G Sbjct: 260 KDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG 319 Query: 310 AEMTGQPGDPVNAARAVRGWLGDK-GIDTNGLAIENGAGLSRIERVTPGLLANVLLQTWR 368 PG + AVR L + G+D I +G+GLSR + P + VL + Sbjct: 320 HARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQ 379 Query: 369 SPLMPEFVSSLPLVGYDGTMRRR--LKTQGVAGQAHIKTGTLNDVRSIAGYVQAASGKTY 426 F+S LPL GYDG+++ R L GV G+ KTG+L V ++AG++ ASG+ Sbjct: 380 HDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRM 439 Query: 427 VVV-FLINHPAAPNGQK 442 V +L + P Q+ Sbjct: 440 AFVQYLSGYAVEPADQR 456 >ECs4061 [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) Ecs Escherichia coli O157:H7 Length = 477 Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 117/437 (26%), Positives = 193/437 (44%), Gaps = 20/437 (4%) Query: 19 VAHIPQQNTGVLVIDTEGSKRVLVSNNIAQPFNPASVMKLVTTDAALEMLGPTFTWKTQA 78 + +P L++ G+ + + Q PAS K++T AAL LGP F + T Sbjct: 27 ITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTL 86 Query: 79 YIDGTLSGGVLNGDLILKGGGDPKLVLENFWLLLRQLRARGIQDIRGKLVLDRSYFASSS 138 G + GVL GDL+ + G DP L ++ ++ L+ G+ I G +++D S FAS Sbjct: 87 ETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHD 146 Query: 139 YDPAQFDGDPQKPYNAGPDALLLNYRTQAFRFEPDAASGT---VSVSMDPPMAGFTI--T 193 P D + ++A P +++ + G + V+ P+ F+ T Sbjct: 147 KAPGWPWNDMTQCFSAPPAVAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRT 206 Query: 194 PPRLSQEPCGDWQGKLMLNNDASGATFSGSYSADCGARVWYVHPYRMS---NVQYVGASF 250 PR S E + ++ D + T +G C + P + Y GA Sbjct: 207 LPRGSAE--AQYCELDVVPGDLNRFTLTG-----CLPQRSEPLPLAFAVQDGASYAGAIL 259 Query: 251 AQMWADLGGRFAGRVL-DGQVTPSARMMVEVQSPALPEVIRDINKYSNNVMARQVLLTLG 309 G ++G +L QV ++ QS L ++++ + K S+N++A V +G Sbjct: 260 KDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG 319 Query: 310 AEMTGQPGDPVNAARAVRGWLGDK-GIDTNGLAIENGAGLSRIERVTPGLLANVLLQTWR 368 PG + AVR L + G+D I +G+GLSR + P + VL + Sbjct: 320 HARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQ 379 Query: 369 SPLMPEFVSSLPLVGYDGTMRRR--LKTQGVAGQAHIKTGTLNDVRSIAGYVQAASGKTY 426 F+S LPL GYDG+++ R L GV G+ KTG+L V ++AG++ ASG+ Sbjct: 380 HDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRM 439 Query: 427 VVV-FLINHPAAPNGQK 442 V +L + P Q+ Sbjct: 440 AFVQYLSGYAVEPADQR 456