BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0028.p         (156 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGpA559 [S] COG3558 Uncharacterized protein conserved in bacteri...   218   6e-57
mll3526 Non COG                                                       214   7e-56
sll0781 [S] COG3558 Uncharacterized protein conserved in bacteri...   211   7e-55
PA5395 [S] COG3558 Uncharacterized protein conserved in bacteria...   206   1e-53

>AGpA559 [S] COG3558 Uncharacterized protein conserved in bacteria Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 154

 Score =  218 bits (554), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 106/153 (69%), Positives = 120/153 (78%), Gaps = 1/153 (0%)

Query: 4   RPPLPPFTRETAIEKVRLAENGWNTRDAEKVALAYTEDSWWRNRAEFAQGREAITALLKR 63
           RPP+PPFT +TAIEKVRLAE+GWN+RDA KVALAYT D+ WRNR EFA  RE   A L R
Sbjct: 3   RPPVPPFTCKTAIEKVRLAEDGWNSRDAAKVALAYTVDTRWRNRVEFATNREEAQAFLTR 62

Query: 64  KWTRELDYRLVKELWAFDGARIAVRFAYEYHDDSGQWYRAYGNENWEFDEQGLMHHRHAC 123
           KW RE +YRL+KELWAF G RIAVR+AYEY DD+GQW+RAYGNENWEF E GLM HRHAC
Sbjct: 63  KWNREHEYRLIKELWAFTGNRIAVRYAYEYRDDNGQWFRAYGNENWEFAEDGLMAHRHAC 122

Query: 124 INEHPIKPEERKFLWDNSGPRPADHPGLSDFGI 156
           INE PI   +R + W   G RP DHP L+D G+
Sbjct: 123 INEMPIAESDRLYHWP-LGRRPDDHPSLTDLGL 154


>mll3526 Non COG
          Length = 156

 Score =  214 bits (544), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 104/153 (67%), Positives = 120/153 (78%), Gaps = 1/153 (0%)

Query: 4   RPPLPPFTRETAIEKVRLAENGWNTRDAEKVALAYTEDSWWRNRAEFAQGREAITALLKR 63
           RPPLPPFT ETA +K R+AE+ WN+RD  +VALAYT DS WRNRAEF QGR+AI A L R
Sbjct: 5   RPPLPPFTAETAAQKARMAEDAWNSRDPARVALAYTTDSHWRNRAEFLQGRDAIQAFLTR 64

Query: 64  KWTRELDYRLVKELWAFDGARIAVRFAYEYHDDSGQWYRAYGNENWEFDEQGLMHHRHAC 123
           KW+RELDYRL+KE+WAF G RIAVRFAYE+HDDSG W+R+YGNENWEFDE GLM  R A 
Sbjct: 65  KWSRELDYRLIKEVWAFHGNRIAVRFAYEWHDDSGSWFRSYGNENWEFDEHGLMRLRIAS 124

Query: 124 INEHPIKPEERKFLWDNSGPRPADHPGLSDFGI 156
           IN+ PI   +RK+ W   G RP DHP LS  G+
Sbjct: 125 INDLPISAADRKYHWP-LGRRPDDHPSLSALGL 156


>sll0781 [S] COG3558 Uncharacterized protein conserved in bacteria Syn
           Synechocystis
          Length = 155

 Score =  211 bits (536), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 100/147 (68%), Positives = 114/147 (77%)

Query: 5   PPLPPFTRETAIEKVRLAENGWNTRDAEKVALAYTEDSWWRNRAEFAQGREAITALLKRK 64
           P +PPFT+E AI KVR+AEN WN R+ +KV +AYTEDS+WRNRAE  QGRE I   L+RK
Sbjct: 4   PLVPPFTKEIAIAKVRMAENAWNGRNPDKVCMAYTEDSFWRNRAEVFQGREKIREFLRRK 63

Query: 65  WTRELDYRLVKELWAFDGARIAVRFAYEYHDDSGQWYRAYGNENWEFDEQGLMHHRHACI 124
           W +EL+YRLVKELWAF   RIAVRF YE+ DD+GQWYRAYGNENWEFDE GLM  R A I
Sbjct: 64  WDKELNYRLVKELWAFGENRIAVRFQYEWQDDAGQWYRAYGNENWEFDEAGLMRRREASI 123

Query: 125 NEHPIKPEERKFLWDNSGPRPADHPGL 151
           N+ PI   ER+F WD  G RP DHPGL
Sbjct: 124 NDKPIAESERRFFWDAPGDRPLDHPGL 150


>PA5395 [S] COG3558 Uncharacterized protein conserved in bacteria Pae
           Pseudomonas aeruginosa
          Length = 156

 Score =  206 bits (525), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 97/154 (62%), Positives = 120/154 (77%), Gaps = 1/154 (0%)

Query: 3   IRPPLPPFTRETAIEKVRLAENGWNTRDAEKVALAYTEDSWWRNRAEFAQGREAITALLK 62
           +RPPLPPFT ETA +KVR AE+GWN+RD ++V+LAY+ DS WRNR+ F +GRE I   L 
Sbjct: 4   VRPPLPPFTAETAAQKVRAAEDGWNSRDPQRVSLAYSPDSVWRNRSTFVRGRERIVEFLS 63

Query: 63  RKWTRELDYRLVKELWAFDGARIAVRFAYEYHDDSGQWYRAYGNENWEFDEQGLMHHRHA 122
            KW RE +YRL+KELWAF G RIAVRFAYE+HDDSG W+R+YGNENW FDEQGLM+ RHA
Sbjct: 64  GKWQREQEYRLIKELWAFTGNRIAVRFAYEWHDDSGNWFRSYGNENWAFDEQGLMYERHA 123

Query: 123 CINEHPIKPEERKFLWDNSGPRPADHPGLSDFGI 156
            IN+ PI+ ++R F W   G RP +HP L + G+
Sbjct: 124 SINDLPIREDQRLFRW-LLGRRPDNHPSLGELGL 156