BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0128.p (113 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1333 [D] COG0239 Integral membrane protein possibly involved ... 117 9e-27 PA4383 [D] COG0239 Integral membrane protein possibly involved i... 98 5e-21 ZcrcB [D] COG0239 Integral membrane protein possibly involved in... 91 9e-19 ECs0663 [D] COG0239 Integral membrane protein possibly involved ... 91 9e-19 crcB [D] COG0239 Integral membrane protein possibly involved in ... 89 2e-18 YPO2596 [D] COG0239 Integral membrane protein possibly involved ... 89 2e-18 STM0630 [D] COG0239 Integral membrane protein possibly involved ... 88 6e-18 PM1630 [D] COG0239 Integral membrane protein possibly involved i... 80 1e-15 Cj0517 [D] COG0239 Integral membrane protein possibly involved i... 72 2e-13 AGc2712 [D] COG0239 Integral membrane protein possibly involved ... 69 3e-12 >RSc1333 [D] COG0239 Integral membrane protein possibly involved in chromosome condensation Rso Ralstonia solanacearum Length = 126 Score = 117 bits (292), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 74/111 (66%) Query: 1 LGAWLRWRISVVWNVSGHFVPLGTLAANWIGAYVIGFLVAYFEQHPGLPPEWRLFAVTGF 60 LGAWLRW +V+WN +P GTLAAN +G Y+IG V +F+ H LPPEWRL AVTGF Sbjct: 15 LGAWLRWAFAVLWNAINPALPYGTLAANLLGGYLIGVAVGFFDTHASLPPEWRLLAVTGF 74 Query: 61 LGGLTTFSTFSAEAMILLQRGDYLWAIGHSGLHLLGSIVLCVAGFASYRAL 111 LGGLTTFSTFS+E M + GDY + H HL GS+ L + G + R L Sbjct: 75 LGGLTTFSTFSSEVMANILAGDYAIGMLHVAAHLGGSLFLTMLGLWTVRTL 125 >PA4383 [D] COG0239 Integral membrane protein possibly involved in chromosome condensation Pae Pseudomonas aeruginosa Length = 127 Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 53/108 (49%), Positives = 67/108 (62%) Query: 6 RWRISVVWNVSGHFVPLGTLAANWIGAYVIGFLVAYFEQHPGLPPEWRLFAVTGFLGGLT 65 RW + + N +P GTL AN +G YVIG +AYF Q PG+ PEWRL +TGF GGLT Sbjct: 19 RWFLGLKLNSLLPSIPPGTLLANLVGGYVIGAAIAYFAQAPGIAPEWRLLIITGFCGGLT 78 Query: 66 TFSTFSAEAMILLQRGDYLWAIGHSGLHLLGSIVLCVAGFASYRALAG 113 TFSTFSAE + LLQ G WA G H+ GS+++ + G S + G Sbjct: 79 TFSTFSAEVVSLLQEGRLGWAAGAIATHVSGSLLMTLLGLFSMNWMLG 126 >ZcrcB [D] COG0239 Integral membrane protein possibly involved in chromosome condensation EcZ Escherichia coli O157:H7 EDL933 Length = 127 Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 48/104 (46%), Positives = 67/104 (64%) Query: 2 GAWLRWRISVVWNVSGHFVPLGTLAANWIGAYVIGFLVAYFEQHPGLPPEWRLFAVTGFL 61 G+ RW +S+ +N +PLGTLAAN IGA++IG A+F + + P W++ TGF Sbjct: 15 GSVARWLLSMRFNPLHQAIPLGTLAANLIGAFIIGMGFAWFSRMTNIDPVWKVLITTGFC 74 Query: 62 GGLTTFSTFSAEAMILLQRGDYLWAIGHSGLHLLGSIVLCVAGF 105 GGLTTFSTFSAE + LLQ G + WA+ + ++LLGS + F Sbjct: 75 GGLTTFSTFSAEVVFLLQEGRFGWALLNVFVNLLGSFAMTALAF 118 >ECs0663 [D] COG0239 Integral membrane protein possibly involved in chromosome condensation Ecs Escherichia coli O157:H7 Length = 127 Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 48/104 (46%), Positives = 67/104 (64%) Query: 2 GAWLRWRISVVWNVSGHFVPLGTLAANWIGAYVIGFLVAYFEQHPGLPPEWRLFAVTGFL 61 G+ RW +S+ +N +PLGTLAAN IGA++IG A+F + + P W++ TGF Sbjct: 15 GSVARWLLSMRFNPLHQAIPLGTLAANLIGAFIIGMGFAWFSRMTNIDPVWKVLITTGFC 74 Query: 62 GGLTTFSTFSAEAMILLQRGDYLWAIGHSGLHLLGSIVLCVAGF 105 GGLTTFSTFSAE + LLQ G + WA+ + ++LLGS + F Sbjct: 75 GGLTTFSTFSAEVVFLLQEGRFGWALLNVFVNLLGSFAMTALAF 118 >crcB [D] COG0239 Integral membrane protein possibly involved in chromosome condensation Eco Escherichia coli K12 Length = 127 Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 47/104 (45%), Positives = 66/104 (63%) Query: 2 GAWLRWRISVVWNVSGHFVPLGTLAANWIGAYVIGFLVAYFEQHPGLPPEWRLFAVTGFL 61 G+ RW +S+ +N +PLGTL AN IGA++IG A+F + + P W++ TGF Sbjct: 15 GSVARWLLSMRFNPLHQAIPLGTLTANLIGAFIIGIGFAWFSRMTNIDPVWKVLITTGFC 74 Query: 62 GGLTTFSTFSAEAMILLQRGDYLWAIGHSGLHLLGSIVLCVAGF 105 GGLTTFSTFSAE + LLQ G + WA+ + ++LLGS + F Sbjct: 75 GGLTTFSTFSAEVVFLLQEGRFGWALLNVFVNLLGSFAMTALAF 118 >YPO2596 [D] COG0239 Integral membrane protein possibly involved in chromosome condensation Ype Yersinia pestis Length = 127 Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 43/105 (40%), Positives = 65/105 (61%) Query: 1 LGAWLRWRISVVWNVSGHFVPLGTLAANWIGAYVIGFLVAYFEQHPGLPPEWRLFAVTGF 60 +G+ RW +S+ N + +P+GTL N +GA++IG +A+F + + P W+L TGF Sbjct: 14 VGSMARWLVSLKLNSASAHLPVGTLIVNLVGAFIIGLTLAFFSRMTHIDPVWKLLITTGF 73 Query: 61 LGGLTTFSTFSAEAMILLQRGDYLWAIGHSGLHLLGSIVLCVAGF 105 GGLTTFSTFS E + L+Q G WA G L++ GS+ + + F Sbjct: 74 CGGLTTFSTFSVEVVYLIQEGKLAWAAGTILLNVAGSLAMTMLAF 118 >STM0630 [D] COG0239 Integral membrane protein possibly involved in chromosome condensation Sty Salmonella typhimurium LT2 Length = 127 Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 47/111 (42%), Positives = 69/111 (62%) Query: 2 GAWLRWRISVVWNVSGHFVPLGTLAANWIGAYVIGFLVAYFEQHPGLPPEWRLFAVTGFL 61 G+ RW +S+ +N +P+GTL AN +GA++IG A+F + + P W++ TGF Sbjct: 15 GSVARWMLSMRFNPLHQAIPIGTLTANLLGAFIIGMGFAWFNRMTHIDPMWKVLITTGFC 74 Query: 62 GGLTTFSTFSAEAMILLQRGDYLWAIGHSGLHLLGSIVLCVAGFASYRALA 112 GGLTTFSTFSAE + LLQ G + WA+ + ++LLGS + F + A A Sbjct: 75 GGLTTFSTFSAEVVFLLQEGRFGWALLNVLINLLGSFAMTALAFWLFSAAA 125 >PM1630 [D] COG0239 Integral membrane protein possibly involved in chromosome condensation Pmu Pasteurella multocida Length = 134 Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 48/109 (44%), Positives = 65/109 (59%) Query: 1 LGAWLRWRISVVWNVSGHFVPLGTLAANWIGAYVIGFLVAYFEQHPGLPPEWRLFAVTGF 60 LGA RW + ++ N LGTL AN++G +IG +A+F Q+P EWRLF VTGF Sbjct: 23 LGALSRWGLGLLLNPLFSAFSLGTLVANYLGCLIIGVFLAFFWQYPQCSAEWRLFFVTGF 82 Query: 61 LGGLTTFSTFSAEAMILLQRGDYLWAIGHSGLHLLGSIVLCVAGFASYR 109 LG LTTFSTFSAE + L + +L + + HLLG ++ G +R Sbjct: 83 LGSLTTFSTFSAEVIENLIQQKWLAGLMLASGHLLGCLLFTALGVFIWR 131 >Cj0517 [D] COG0239 Integral membrane protein possibly involved in chromosome condensation Cje Campylobacter jejuni Length = 122 Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/103 (40%), Positives = 64/103 (62%), Gaps = 6/103 (5%) Query: 1 LGAWLRW-RISVVWNVSGHFVPLGTLAANWIGAYVIGFLVAYFEQHPGLPPEWRLFAVTG 59 +GA LR I++V + + GTL N +G+++IG L +Y Q+ GL P + F TG Sbjct: 14 IGAILRMLSINLVNKFFPYSISFGTLFVNVLGSFIIGLLFSY-AQNKGLSPLLKSFISTG 72 Query: 60 FLGGLTTFSTFSAEAMILLQRGDYLWAIGHSGLHLLGSIVLCV 102 FLG TTFSTFS + ++LLQ G+YL H L+++ ++ LC+ Sbjct: 73 FLGAFTTFSTFSYQNLLLLQSGNYL----HFALNIILNVFLCL 111 >AGc2712 [D] COG0239 Integral membrane protein possibly involved in chromosome condensation Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 125 Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 5/104 (4%) Query: 1 LGAWLRWRISV-VWNVSGHFVPLGTLAANWIGAYVIGFLVAYFEQHPGLPPEWRLFAVTG 59 +G+ R+ + V ++G P GTLA N +G+++IG LV + E RLF VTG Sbjct: 13 IGSVFRYLVGVWSMRLAGPNFPWGTLAVNIVGSFLIGLLVELVARRLNASIEMRLFLVTG 72 Query: 60 FLGGLTTFSTFSAEAMILLQRGDYLWAIGHSGLHLLGSIVLCVA 103 LGG TTFS+FS +A+ L +RG A+G S ++L S+V+ +A Sbjct: 73 VLGGFTTFSSFSLDAVSLFERG----ALGLSAFYILASLVVSIA 112