BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0086.p (121 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1307 [J] COG0360 Ribosomal protein S6 Rso Ralstonia solanacearum 197 5e-51 NMA1537 [J] COG0360 Ribosomal protein S6 NmA Neisseria meningiti... 158 3e-39 NMB1323 [J] COG0360 Ribosomal protein S6 Nme Neisseria meningiti... 157 4e-39 VC0366 [J] COG0360 Ribosomal protein S6 Vch Vibrio cholerae 153 1e-37 YPO3539 [J] COG0360 Ribosomal protein S6 Ype Yersinia pestis 150 7e-37 PM1180 [J] COG0360 Ribosomal protein S6 Pmu Pasteurella multocida 150 9e-37 STM4391 [J] COG0360 Ribosomal protein S6 Sty Salmonella typhimur... 147 4e-36 rpsF [J] COG0360 Ribosomal protein S6 Eco Escherichia coli K12 147 5e-36 ZrpsF [J] COG0360 Ribosomal protein S6 EcZ Escherichia coli O157... 147 5e-36 ECs5176 [J] COG0360 Ribosomal protein S6 Ecs Escherichia coli O1... 147 5e-36 >RSc1307 [J] COG0360 Ribosomal protein S6 Rso Ralstonia solanacearum Length = 122 Score = 197 bits (501), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 91/121 (75%), Positives = 104/121 (85%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVFIVHPDQSEQVPAMIERYK VT++GG+VHRVEDWGRRQLAY IQKLAKAHYV Sbjct: 1 MRHYEIVFIVHPDQSEQVPAMIERYKSTVTSQGGQVHRVEDWGRRQLAYMIQKLAKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKSRTEAPA 120 C+NIE ETLAE+E FKFNDAVLRHL V+ KKAET PSP++K VQ+E+A K+ ++ Sbjct: 61 CVNIECGKETLAELEHAFKFNDAVLRHLIVQTKKAETAPSPMMKEVQREEAKKAAAQSEQ 120 Query: 121 A 121 A Sbjct: 121 A 121 >NMA1537 [J] COG0360 Ribosomal protein S6 NmA Neisseria meningitidis Z2491 Length = 122 Score = 158 bits (399), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 71/103 (68%), Positives = 83/103 (80%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVFIVHPDQSEQVPAM+ERYK ++ GK+HR+EDWGRRQLAY I K+ KAHYV Sbjct: 1 MRHYEIVFIVHPDQSEQVPAMVERYKTMIAEANGKIHRLEDWGRRQLAYPINKIHKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPIL 103 +NIE E + E+ET F+FNDAVLRHLT+K K A T SP+L Sbjct: 61 LMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPML 103 >NMB1323 [J] COG0360 Ribosomal protein S6 Nme Neisseria meningitidis MC58 Length = 122 Score = 157 bits (398), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 70/103 (67%), Positives = 83/103 (80%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVFIVHPDQSEQVPAM+ERYK ++ GK+HR+EDWGRRQLAY I K+ KAHYV Sbjct: 1 MRHYEIVFIVHPDQSEQVPAMVERYKTMIAEANGKIHRLEDWGRRQLAYPINKIHKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPIL 103 +NIE E + E+ET F+FNDA+LRHLT+K K A T SP+L Sbjct: 61 LMNIETTPEVVEELETAFRFNDAILRHLTIKTKHAVTEASPML 103 >VC0366 [J] COG0360 Ribosomal protein S6 Vch Vibrio cholerae Length = 122 Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 69/105 (65%), Positives = 83/105 (79%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVF+VHPDQSEQV MIERY G +T GGK+HR+EDWGRRQLAY I KL KAHYV Sbjct: 1 MRHYEIVFMVHPDQSEQVAGMIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKA 105 +N+E D + E+ET F+FNDAVLR++ ++ K A T PS +LKA Sbjct: 61 LMNVEADQAVVDELETAFRFNDAVLRNMIMRTKAAITEPSIMLKA 105 >YPO3539 [J] COG0360 Ribosomal protein S6 Ype Yersinia pestis Length = 130 Score = 150 bits (379), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 66/105 (62%), Positives = 81/105 (77%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVF+VHPDQSEQVP MIERY +T G +HR+EDWGRRQLAY I KL KAHYV Sbjct: 1 MRHYEIVFMVHPDQSEQVPGMIERYSATITNAAGTIHRLEDWGRRQLAYPINKLHKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKA 105 LN+E E + E+ET F+FNDAV+R + +++K A T SP++KA Sbjct: 61 LLNVEAPQEAIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKA 105 >PM1180 [J] COG0360 Ribosomal protein S6 Pmu Pasteurella multocida Length = 125 Score = 150 bits (378), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 68/105 (64%), Positives = 83/105 (79%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVF+VHPDQSEQVP MIERY G V GG+VHR+EDWGRRQLAY I KL KAHYV Sbjct: 1 MRHYEIVFMVHPDQSEQVPGMIERYTGSVKEAGGQVHRLEDWGRRQLAYPINKLHKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKA 105 +N+E E + E+ET F++NDAVLR++ ++ K A T SP++KA Sbjct: 61 LMNVEAPQEVIDELETTFRYNDAVLRNVIIRTKHAVTEASPMVKA 105 >STM4391 [J] COG0360 Ribosomal protein S6 Sty Salmonella typhimurium LT2 Length = 131 Score = 147 bits (372), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 66/105 (62%), Positives = 81/105 (77%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVF+VHPDQSEQVP MIERY +T GK+HR+EDWGRRQLAY I KL KAHYV Sbjct: 1 MRHYEIVFMVHPDQSEQVPGMIERYSAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKA 105 +N+E E + E+ET F+FNDAV+R + ++ K A T SP++KA Sbjct: 61 LMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKA 105 >rpsF [J] COG0360 Ribosomal protein S6 Eco Escherichia coli K12 Length = 131 Score = 147 bits (371), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 66/105 (62%), Positives = 81/105 (77%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVF+VHPDQSEQVP MIERY +T GK+HR+EDWGRRQLAY I KL KAHYV Sbjct: 1 MRHYEIVFMVHPDQSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKA 105 +N+E E + E+ET F+FNDAV+R + ++ K A T SP++KA Sbjct: 61 LMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKA 105 >ZrpsF [J] COG0360 Ribosomal protein S6 EcZ Escherichia coli O157:H7 EDL933 Length = 131 Score = 147 bits (371), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 66/105 (62%), Positives = 81/105 (77%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVF+VHPDQSEQVP MIERY +T GK+HR+EDWGRRQLAY I KL KAHYV Sbjct: 1 MRHYEIVFMVHPDQSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKA 105 +N+E E + E+ET F+FNDAV+R + ++ K A T SP++KA Sbjct: 61 LMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKA 105 >ECs5176 [J] COG0360 Ribosomal protein S6 Ecs Escherichia coli O157:H7 Length = 131 Score = 147 bits (371), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 66/105 (62%), Positives = 81/105 (77%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVF+VHPDQSEQVP MIERY +T GK+HR+EDWGRRQLAY I KL KAHYV Sbjct: 1 MRHYEIVFMVHPDQSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKA 105 +N+E E + E+ET F+FNDAV+R + ++ K A T SP++KA Sbjct: 61 LMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKA 105