BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0082.p (362 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value YPO1842 [N] COG1344 Flagellin and related hook-associated protei... 224 2e-58 TM0758 [N] COG1344 Flagellin and related hook-associated protein... 213 6e-55 VC2143 [N] COG1344 Flagellin and related hook-associated protein... 213 6e-55 VC2188 [N] COG1344 Flagellin and related hook-associated protein... 212 1e-54 BS_hag [N] COG1344 Flagellin and related hook-associated protein... 196 1e-49 CAC2203 [N] COG1344 Flagellin and related hook-associated protei... 173 5e-43 TP0870 [N] COG1344 Flagellin and related hook-associated protein... 171 3e-42 TP0868 [N] COG1344 Flagellin and related hook-associated protein... 167 3e-41 PA1092 [N] COG1344 Flagellin and related hook-associated protein... 163 5e-40 TP0792 [N] COG1344 Flagellin and related hook-associated protein... 160 3e-39 >YPO1842 [N] COG1344 Flagellin and related hook-associated proteins Ype Yersinia pestis Length = 369 Score = 224 bits (572), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 172/403 (42%), Positives = 226/403 (56%), Gaps = 80/403 (19%) Query: 3 SVINTNIPSLNTQRNLNASQSSLNTSIQRLSSGLRVNSAKDDAAGLAIADRMNSQVKGLA 62 +VINTN SL TQ NLN SQSSL T+I+RLSSGLR+NSAKDDAAG AIA+R S +KGL Sbjct: 2 AVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLT 61 Query: 63 VAQRNANDGISMAQTAEGALSTVGDNLQRMRELAVQAANGTNSAQDRKTLNDEYTQLSQE 122 A RNANDGIS+AQT EG+L+ + +NLQR+REL VQA NG+NS+ D ++ DE + E Sbjct: 62 QAARNANDGISIAQTTEGSLNEINNNLQRVRELTVQAQNGSNSSSDLDSIQDEISLRLAE 121 Query: 123 VFRVLNGTSFNGQNLFTGTGQGASAGTGSDSANVSASLTLSFQVGANVSDNKLNDQITIT 182 + RV + T FNG+ + + + T+S QVGA ND TI Sbjct: 122 IDRVSDQTQFNGKKVL------------------AENTTMSIQVGA-------NDGETID 156 Query: 183 LDDLSNNGTMANVIGTSAKGLIGLG--NTSGVSTAQATY-------TSAKAALD----NL 229 + N+ +K L GLG + SGVS A + + ALD + Sbjct: 157 I----------NLQKIDSKSL-GLGSYSVSGVSGALTSLTDTSVTGVTTTTALDFSDIST 205 Query: 230 FATGSSL-------SSSALASSAVT-------LQATVDS--AKLAL-DQAVAAP------ 266 FA G+++ + A A V + VD+ K+ D A P Sbjct: 206 FAKGATVHGIGDVGTDGAYADGYVIRTTDGKQYKGEVDATNGKVTFADDANGDPIDDATK 265 Query: 267 ---SAQ-SDAQKA----IQNLDKAISLISSKRAEFGAVQNRFSAVISNLQVSSENITSSR 318 +AQ S A KA ++ LD AI + R+ GAVQNRF + ++NL + N+TS+R Sbjct: 266 LEAAAQFSPAGKATASPLETLDDAIKQVDGLRSSLGAVQNRFESAVTNLNNTVTNLTSAR 325 Query: 319 SRIMDTDYAQETANLTRAQILQQAGNAMLSQANSAPQQVLSLL 361 SRI D DYA E +N++RAQILQQAG ++LSQAN PQ VLSLL Sbjct: 326 SRIEDADYATEVSNMSRAQILQQAGTSVLSQANQVPQTVLSLL 368 >TM0758 [N] COG1344 Flagellin and related hook-associated proteins Tma Thermotoga maritima Length = 387 Score = 213 bits (542), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 143/385 (37%), Positives = 215/385 (55%), Gaps = 27/385 (7%) Query: 5 INTNIPSLNTQRNLNASQSSLNTSIQRLSSGLRVNSAKDDAAGLAIADRMNSQVKGLAVA 64 IN NI +LN RN++ +Q S++ +++RLSSGLR+N A DDAAGLAI+++M Q+KGL +A Sbjct: 3 INHNISALNAWRNISQTQYSMSKTLERLSSGLRINRAGDDAAGLAISEKMRGQIKGLNMA 62 Query: 65 QRNANDGISMAQTAEGALSTVGDNLQRMRELAVQAANGTNSAQDRKTLNDEYTQLSQEVF 124 +NA D IS+ QTAEGAL+ V LQRMRELAVQAA+ TN+ DR+ + E QL +E+ Sbjct: 63 IKNAQDAISLIQTAEGALTEVHSILQRMRELAVQAASDTNTDVDREQIQKEIDQLREEID 122 Query: 125 RVLNGTSFNGQNLFTG--------------TGQGASAGTGS-DSANVSASLTLSFQVGAN 169 R+ T FN + L G TG + GS SA V + + Sbjct: 123 RIARTTEFNTKKLLDGKLESFRSQVDAKVVTGGNINVQLGSVSSAAVEGTYVIEVGQFNG 182 Query: 170 VSDNKLNDQITI--------TLDDLS-NNGTMANVIGTSAKGLIGLGNTSGVSTAQATYT 220 ++L+ +IT+ T+ ++ + T+ N+ T ++ + + G Sbjct: 183 AETSELDVKITLFTAGGYSTTVVTITVGSATVGNINFTWDTDVLSINDFGGALPKNEVVD 242 Query: 221 SAKAALDNLFATGSSLSSSALASSAVTLQATVD---SAKLALDQAVAAPSAQSDAQKAIQ 277 SA ++ ++ + S L A+ + A +D +A L L + Q A++AI Sbjct: 243 SAVVRVEAIYTSASQLIFQIGANEGHNMVAGIDDMSAAALGLTTVSLDVTTQDAAERAIM 302 Query: 278 NLDKAISLISSKRAEFGAVQNRFSAVISNLQVSSENITSSRSRIMDTDYAQETANLTRAQ 337 +D AI +S+ RA GAVQNR ISNL V++EN+T++ SRI D D A+E T+ Q Sbjct: 303 VVDAAIHRVSTARAALGAVQNRLEHTISNLGVAAENLTAAESRIRDADMAKEMMEFTKQQ 362 Query: 338 ILQQAGNAMLSQANSAPQQVLSLLK 362 IL Q+ AML+Q+N+ PQ VL L++ Sbjct: 363 ILLQSSMAMLAQSNTLPQNVLQLMR 387 >VC2143 [N] COG1344 Flagellin and related hook-associated proteins Vch Vibrio cholerae Length = 377 Score = 213 bits (541), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 156/408 (38%), Positives = 227/408 (55%), Gaps = 79/408 (19%) Query: 1 MASVINTNIPSLNTQRNLNASQSSLNTSIQRLSSGLRVNSAKDDAAGLAIADRMNSQVKG 60 MA +NTN+ ++ QR L + ++ TS++RLSSG ++NSAKDDAAGL I++R+N Q +G Sbjct: 1 MAVNVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRG 60 Query: 61 LAVAQRNANDGISMAQTAEGALSTVGDNLQRMRELAVQAANGTNSAQDRKTLNDEYTQLS 120 L VA RNANDGIS+AQTAEGA++ + LQRMR+L++Q+ANG+NS +R + +E T L+ Sbjct: 61 LDVAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALN 120 Query: 121 QEVFRVLNGTSFNGQNLFTGTGQGASAGTGSDSANVSASLTLSFQVGANVSDNKLNDQIT 180 E+ R+ TSF G L GT T SFQ+GA DN + + Sbjct: 121 DELNRIAETTSFGGNKLLNGTFS-----------------TKSFQIGA---DN--GEAVM 158 Query: 181 ITLDDLSNNGTM---------------------ANVIGTSAKGLIGLGNTSGVSTAQ--- 216 +TL D+ ++ M AN I + K + G T V+ + Sbjct: 159 LTLKDMRSDNRMMGGTSYVAAEGKDKDWKVQAGANDITFTLKDIDGNDQTITVNAKEGDD 218 Query: 217 ----ATYTSA-----KAALDN-----LFA-----TGSSLSSSALASSAVTLQA----TVD 253 ATY + KA+++ +FA TG S LA A+ +QA TVD Sbjct: 219 IEEVATYINGQTDMVKASVNEKGQLQIFAGNNKVTGDVAFSGGLA-GALNMQAGTAETVD 277 Query: 254 SAKLALDQAVAAPSAQSDAQKAIQNLDKAISLISSKRAEFGAVQNRFSAVISNLQVSSEN 313 + + ++ AQ+++ +D A+ + S RAE GA QNRF+ ISNL +EN Sbjct: 278 TIDV---------TSVGGAQQSVAVIDSALKYVDSHRAELGAFQNRFNHAISNLDNINEN 328 Query: 314 ITSSRSRIMDTDYAQETANLTRAQILQQAGNAMLSQANSAPQQVLSLL 361 + +S+SRI DTD+A+ET LT++QIL QA +++L+QA AP LSLL Sbjct: 329 VNASKSRIKDTDFAKETTALTKSQILSQASSSVLAQAKQAPNAALSLL 376 >VC2188 [N] COG1344 Flagellin and related hook-associated proteins Vch Vibrio cholerae Length = 379 Score = 212 bits (539), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 143/384 (37%), Positives = 206/384 (53%), Gaps = 35/384 (9%) Query: 5 INTNIPSLNTQRNLNASQSSLNTSIQRLSSGLRVNSAKDDAAGLAIADRMNSQVKGLAVA 64 +NTN+ ++ QR L + LNTS++RLSSG R+NSAKDDAAGL I++R+ +Q +GL VA Sbjct: 5 VNTNVSAMTAQRYLTKATGELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRGLDVA 64 Query: 65 QRNANDGISMAQTAEGALSTVGDNLQRMRELAVQAANGTNSAQDRKTLNDEYTQLSQEVF 124 RNANDGIS+AQTAEGA++ LQRMR+LA+Q+ANGTNSA +R+ LN+E L E+ Sbjct: 65 MRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESVALQDELN 124 Query: 125 RVLNGTSFNGQNLFTGTGQGASAGTGSDSANV----------------------SASLTL 162 R+ TSF G+ L G+ AS GS S T Sbjct: 125 RIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFIAEQPKTK 184 Query: 163 SFQVGANVSDNKLN----DQITITLDDLSNNGTMANVIGTSAKGLIGLGNTSGVSTAQAT 218 + V D K D + LD ++ +G + T G L S + Sbjct: 185 EWGVPPTARDLKFEFTKKDGEAVVLDIIAKDGDDIEELATYINGQTDLFKASVDQEGKLQ 244 Query: 219 YTSAKAALDNLFATGSSLSSSALASSAVTLQATVDSAKLALDQAVAAPSAQSDAQKAIQN 278 A+ ++ F L++ + ++ TV + ++ +Q A+ Sbjct: 245 IFVAEPNIEGNFNISGGLATELGLNGGPGVKTTVQDIDI---------TSVGGSQNAVGI 295 Query: 279 LDKAISLISSKRAEFGAVQNRFSAVISNLQVSSENITSSRSRIMDTDYAQETANLTRAQI 338 +D A+ + S+RA+ GA QNR S ISNL EN+ +S+SRI DTD+A+ET LT++QI Sbjct: 296 IDAALKYVDSQRADLGAKQNRLSHSISNLSNIQENVEASKSRIKDTDFAKETTQLTKSQI 355 Query: 339 LQQAGNAMLSQANSAPQQVLSLLK 362 LQQAG ++L+QA P +SLL+ Sbjct: 356 LQQAGTSILAQAKQLPNSAISLLQ 379 >BS_hag [N] COG1344 Flagellin and related hook-associated proteins Bsu Bacillus subtilis Length = 304 Score = 196 bits (497), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 138/360 (38%), Positives = 204/360 (56%), Gaps = 60/360 (16%) Query: 5 INTNIPSLNTQRNLNASQSSLNTSIQRLSSGLRVNSAKDDAAGLAIADRMNSQVKGLAVA 64 IN NI +LNT L+++ S+ ++++LSSGLR+N A DDAAGLAI+++M Q++GL +A Sbjct: 3 INHNIAALNTLNRLSSNNSASQKNMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLEMA 62 Query: 65 QRNANDGISMAQTAEGALSTVGDNLQRMRELAVQAAN-GT-NSAQDRKTLNDEYTQLSQE 122 +N+ DGIS+ QTAEGAL+ LQR+REL VQA N GT + A D +++ DE + L+ E Sbjct: 63 SKNSQDGISLIQTAEGALTETHAILQRVRELVVQAGNTGTQDKATDLQSIQDEISALTDE 122 Query: 123 VFRVLNGTSFNGQNLFTGTGQGASAGTGSDSANVSASLTLSFQVGANVSDNKLNDQITIT 182 + + N T FNG+ L GT + D+A + L FQ+GAN + QI++ Sbjct: 123 IDGISNRTEFNGKKLLDGTYK-------VDTATPANQKNLVFQIGANAT-----QQISVN 170 Query: 183 LDDLSNNGTMANVIGTSAKGLIGLGNTSGVSTAQATYTSAKAALDNLFATGSSLSSSALA 242 ++D+ G A +G+ G + AAL ++ + L + A Sbjct: 171 IEDM----------GADA---LGIKEADG----------SIAALHSV----NDLDVTKFA 203 Query: 243 SSAVTLQATVDSAKLALDQAVAAPSAQSDAQKAIQNLDKAISLISSKRAEFGAVQNRFSA 302 +A D+A + DAQ + +D+AI+ +SS+RA+ GAVQNR Sbjct: 204 DNA------ADTADIGF-----------DAQLKV--VDEAINQVSSQRAKLGAVQNRLEH 244 Query: 303 VISNLQVSSENITSSRSRIMDTDYAQETANLTRAQILQQAGNAMLSQANSAPQQVLSLLK 362 I+NL S EN+T++ SRI D D A+E + T+ IL QA AML+QAN PQ VL LL+ Sbjct: 245 TINNLSASGENLTAAESRIRDVDMAKEMSEFTKNNILSQASQAMLAQANQQPQNVLQLLR 304 >CAC2203 [N] COG1344 Flagellin and related hook-associated proteins Cac Clostridium acetobutylicum Length = 275 Score = 173 bits (439), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 130/363 (35%), Positives = 179/363 (49%), Gaps = 93/363 (25%) Query: 4 VINTNIPSLNTQRNLNASQSSLNTSIQRLSSGLRVNSAKDDAAGLAIADRMNSQVKGLAV 63 VIN N+ ++N R +N + SI++LSSG R+N A DDAAGLAI+++M +Q+ GL Sbjct: 2 VINHNLNAMNALRQMNINNGEAANSIEKLSSGYRINKAGDDAAGLAISEKMRAQINGLNQ 61 Query: 64 AQRNANDGISMAQTAEGALSTVGDNLQRMRELAVQAANGTNSAQDRKTLNDEYTQLSQEV 123 + RNA DGIS+ QTAEG L+ LQRMRELAVQ+A GTN++ DR L E+ QL EV Sbjct: 62 STRNAQDGISLVQTAEGNLNESQAILQRMRELAVQSATGTNTSTDRANLELEFKQLQSEV 121 Query: 124 FRVLNGTSFNGQNLFTGTGQGASAGTGSDSANVSASLTLSFQVGANVSDNKLNDQITITL 183 R+ + FN + L G+ G + ++FQ+GAN I++++ Sbjct: 122 TRIAVQSEFNTKKLLDGSLTGTAQ--------------MTFQIGANSGQT-----ISLSI 162 Query: 184 DDLSNNGTMANVIGTSAKGLIGLGNTSG-VST---AQATYTSAKAALDNLFATGSSLSSS 239 +++S TS +G+ TS +ST AQA TS + A+D Sbjct: 163 NNMS---------ATS----LGVNTTSASISTQTGAQAAITSVQKAID------------ 197 Query: 240 ALASSAVTLQATVDSAKLALDQAVAAPSAQSDAQKAIQNLDKAISLISSKRAEFGAVQNR 299 TV S + L G+VQNR Sbjct: 198 -----------TVSSERAKL----------------------------------GSVQNR 212 Query: 300 FSAVISNLQVSSENITSSRSRIMDTDYAQETANLTRAQILQQAGNAMLSQANSAPQQVLS 359 I+NL SEN+ S+ SRI D D A E N T++ +L QA AMLSQAN P VL Sbjct: 213 LEHTINNLNTDSENLQSAESRIRDVDMASEMMNYTKSNVLVQAAQAMLSQANQTPNNVLQ 272 Query: 360 LLK 362 LL+ Sbjct: 273 LLR 275 >TP0870 [N] COG1344 Flagellin and related hook-associated proteins Tpa Treponema pallidum Length = 285 Score = 171 bits (432), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 121/359 (33%), Positives = 181/359 (50%), Gaps = 75/359 (20%) Query: 4 VINTNIPSLNTQRNLNASQSSLNTSIQRLSSGLRVNSAKDDAAGLAIADRMNSQVKGLAV 63 +IN N+ ++ QR + ++ +I++LSSG R+N A DDA+GLA++++M SQ++GL Sbjct: 2 IINHNMSAMFAQRQGGINGLAIAKNIEKLSSGYRINRAGDDASGLAVSEKMRSQIRGLNQ 61 Query: 64 AQRNANDGISMAQTAEGALSTVGDNLQRMRELAVQAANGTNSAQDRKTLNDEYTQLSQEV 123 A +N +GIS Q EG L+ + +QR+RELA+QAANG SA+DR + E +QL EV Sbjct: 62 AGQNIQNGISFIQATEGYLAETTEIVQRLRELAIQAANGIYSAEDRMQIQVEVSQLVDEV 121 Query: 124 FRVLNGTSFNGQNLFTGTGQGASAGTGSDSANVSASLTLSFQVGANVSDNKLNDQITITL 183 R+ + FNG NL TG + SA + VGAN+ N++I I Sbjct: 122 DRIASQAQFNGMNLLTGR-----------FSRESALGPMQLHVGANMDQ---NEKIFI-- 165 Query: 184 DDLSNNGTMANVIGTSAKGLIGLGNTSGVSTAQATYTSAKAALDNLFATGSSLSSSALAS 243 N + SA G T G S Sbjct: 166 ----------NTMTASALGFFSDEGTDG-------------------------------S 184 Query: 244 SAVTLQATVDSAKLALDQAVAAPSAQSDAQKAIQNLDKAISLISSKRAEFGAVQNRFSAV 303 ++++ ATVD A K I LD A+ I+ +RA+ GA QNRF Sbjct: 185 RSISI-ATVDGAN-----------------KVIGTLDSALKEINKQRADLGAYQNRFETA 226 Query: 304 ISNLQVSSENITSSRSRIMDTDYAQETANLTRAQILQQAGNAMLSQANSAPQQVLSLLK 362 + +++EN+ ++ SRI D D AQ+ + T+ QIL+Q+ AML+QAN+ PQ VL L++ Sbjct: 227 YQGIAIAAENLQAAESRIRDADLAQQMVDYTKNQILEQSTMAMLAQANTQPQAVLRLMQ 285 >TP0868 [N] COG1344 Flagellin and related hook-associated proteins Tpa Treponema pallidum Length = 286 Score = 167 bits (424), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 116/359 (32%), Positives = 183/359 (50%), Gaps = 74/359 (20%) Query: 4 VINTNIPSLNTQRNLNASQSSLNTSIQRLSSGLRVNSAKDDAAGLAIADRMNSQVKGLAV 63 +IN N+ ++ QR L + + I++LSSG R+N A DDA+GLA++++M SQ++GL Sbjct: 2 IINHNMSAMFAQRTLGHTNVQVGKGIEKLSSGYRINRAGDDASGLAVSEKMRSQIRGLNQ 61 Query: 64 AQRNANDGISMAQTAEGALSTVGDNLQRMRELAVQAANGTNSAQDRKTLNDEYTQLSQEV 123 A NA++G++ Q E L D +QR+RELA+QAANG SA+DR + E +QL EV Sbjct: 62 ASTNASNGVNFIQVTEAYLQETTDIMQRIRELAIQAANGIYSAEDRMQIQVEVSQLVAEV 121 Query: 124 FRVLNGTSFNGQNLFTGTGQGASAGTGSDSANVSASLTLSFQVGANVSDNKLNDQITITL 183 R+ + FNG NL TG + ++ NV ++ F +GAN+ D ++ I Sbjct: 122 DRIASSAQFNGMNLLTGR------FSRTEGENVIGG-SMWFHIGANM-DQRMRVYI---- 169 Query: 184 DDLSNNGTMANVIGTSAKGLIGLGNTSGVSTAQATYTSAKAALDNLFATGSSLSSSALAS 243 GTM V LG +GV Sbjct: 170 ------GTMTAV---------ALGVRNGVD-----------------------------E 185 Query: 244 SAVTLQATVDSAKLALDQAVAAPSAQSDAQKAIQNLDKAISLISSKRAEFGAVQNRFSAV 303 S ++++ T DSA K+I +D A+ I+ +RA+ G QNR Sbjct: 186 SIMSIE-TADSAN-----------------KSIGTIDAALKRINKQRADLGGYQNRMEYT 227 Query: 304 ISNLQVSSENITSSRSRIMDTDYAQETANLTRAQILQQAGNAMLSQANSAPQQVLSLLK 362 + L +++EN+ ++ SRI D + A++ T+ Q+L Q+G AML+QAN++ Q +LS+L+ Sbjct: 228 VVGLDIAAENLQAAESRIRDANIAKQMVEYTKNQVLTQSGTAMLAQANTSAQSILSILR 286 >PA1092 [N] COG1344 Flagellin and related hook-associated proteins Pae Pseudomonas aeruginosa Length = 488 Score = 163 bits (413), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 94/177 (53%), Positives = 123/177 (69%), Gaps = 8/177 (4%) Query: 1 MASVINTNIPSLNTQRNLNASQSSLNTSIQRLSSGLRVNSAKDDAAGLAIADRMNSQVKG 60 MA +NTNI SLNTQRNLNAS + LNTS+QRL++G R+NSAKDDAAGL I++R+++Q+ G Sbjct: 1 MALTVNTNIASLNTQRNLNASSNDLNTSLQRLTTGYRINSAKDDAAGLQISNRLSNQISG 60 Query: 61 LAVAQRNANDGISMAQTAEGALSTVGDNLQRMRELAVQAANGTNSAQDRKTLNDEYTQLS 120 L VA RNANDGIS+AQTAEGAL + LQR+R+LA+Q+ANG+NS DR L E Sbjct: 61 LNVATRNANDGISLAQTAEGALQQSTNILQRIRDLALQSANGSNSDADRAALQKEVAAQQ 120 Query: 121 QEVFRVLNGTSFNGQNLFTGTGQGASAGTGSDSA--------NVSASLTLSFQVGAN 169 E+ R+ + T+F G+ L G+ S GS++ N SAS S+QVG+N Sbjct: 121 AELTRISDTTTFGGRKLLDGSFGTTSFQVGSNAYETIDISLQNASASAIGSYQVGSN 177 Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 53/91 (58%), Positives = 68/91 (74%) Query: 272 AQKAIQNLDKAISLISSKRAEFGAVQNRFSAVISNLQVSSENITSSRSRIMDTDYAQETA 331 AQ AI +D A++ I ++RA+ GAVQNRF I NL SEN T++RSRI DTD+A ETA Sbjct: 398 AQNAIAVVDNALAAIDAQRADLGAVQNRFKNTIDNLTNISENATNARSRIKDTDFAAETA 457 Query: 332 NLTRAQILQQAGNAMLSQANSAPQQVLSLLK 362 L++ Q+LQQAG A+L+QAN PQ VLSLL+ Sbjct: 458 ALSKNQVLQQAGTAILAQANQLPQAVLSLLR 488 >TP0792 [N] COG1344 Flagellin and related hook-associated proteins Tpa Treponema pallidum Length = 286 Score = 160 bits (406), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 124/359 (34%), Positives = 183/359 (50%), Gaps = 74/359 (20%) Query: 4 VINTNIPSLNTQRNLNASQSSLNTSIQRLSSGLRVNSAKDDAAGLAIADRMNSQVKGLAV 63 +IN N+ ++ +QR L + S+ +I++LSSGLR+N + DDA+GLA++++M SQ++GL Sbjct: 2 IINHNMSAMFSQRTLGHTNLSVQKNIEKLSSGLRINRSGDDASGLAVSEKMRSQIRGLNQ 61 Query: 64 AQRNANDGISMAQTAEGALSTVGDNLQRMRELAVQAANGTNSAQDRKTLNDEYTQLSQEV 123 A NA +GIS Q AE L D +QR+REL+VQAANG SA+DR + E +QL EV Sbjct: 62 ASTNAQNGISFIQVAEAFLQETTDVIQRIRELSVQAANGIYSAEDRLYIQVEVSQLVAEV 121 Query: 124 FRVLNGTSFNGQNLFTGTGQGASAGTGSDSANVSASLTLSFQVGANVSDNKLNDQITITL 183 R+ + FNG N+ TG A G ++ V+AS+ F +GAN+ D + I Sbjct: 122 DRIASHAQFNGMNMLTGR----FARQGGENT-VTASMW--FHIGANM-DQRTRAYI---- 169 Query: 184 DDLSNNGTMANVIGTSAKGLIGLGNTSGVSTAQATYTSAKAALDNLFATGSSLSSSALAS 243 GTM V A G+ G+ S + ++ S A+ Sbjct: 170 ------GTMTAV----AMGIRDAGDESVM----------------------NIDSPEKAN 197 Query: 244 SAVTLQATVDSAKLALDQAVAAPSAQSDAQKAIQNLDKAISLISSKRAEFGAVQNRFSAV 303 A+ LDQA+ + Q A QN R Sbjct: 198 RAIG----------TLDQAIKRINKQRADLGAYQN--------------------RLDHT 227 Query: 304 ISNLQVSSENITSSRSRIMDTDYAQETANLTRAQILQQAGNAMLSQANSAPQQVLSLLK 362 ++ + V++EN+ ++ SRI D D A+E + T+ QIL Q+G AML+QAN A Q VLSLL+ Sbjct: 228 VAGINVAAENLQAAESRIRDVDMAKEMVDYTKNQILVQSGTAMLAQANQATQSVLSLLR 286