BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0071.p (319 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp0391 [N] COG1536 Flagellar motor switch protein Rso Ralstonia... 404 e-112 STM1970 [N] COG1536 Flagellar motor switch protein Sty Salmonell... 352 7e-97 fliG [N] COG1536 Flagellar motor switch protein Eco Escherichia ... 351 1e-96 ECs2678 [N] COG1536 Flagellar motor switch protein Ecs Escherich... 351 1e-96 ZfliG [N] COG1536 Flagellar motor switch protein EcZ Escherichia... 350 2e-96 YPO1829 [N] COG1536 Flagellar motor switch protein Ype Yersinia ... 345 6e-95 PA1102 [N] COG1536 Flagellar motor switch protein Pae Pseudomona... 338 1e-92 VC2132 [N] COG1536 Flagellar motor switch protein Vch Vibrio cho... 285 1e-76 BU074 [N] COG1536 Flagellar motor switch protein Buc Buchnera sp... 211 2e-54 TM0220 [N] COG1536 Flagellar motor switch protein Tma Thermotoga... 209 9e-54 >RSp0391 [N] COG1536 Flagellar motor switch protein Rso Ralstonia solanacearum Length = 330 Score = 404 bits (1039), Expect = e-112, Method: Compositional matrix adjust. Identities = 198/319 (62%), Positives = 255/319 (79%), Gaps = 1/319 (0%) Query: 1 MLALGEDEAAEVMKYLGPKEVQKLGAAMSALRNVSFEEINEVLEAFVAETGQASSLGLDS 60 +++LGE+EAAEV+K+LGP+EVQKLGA M+AL+NVS + + + +AF E + L +DS Sbjct: 13 LMSLGENEAAEVLKHLGPREVQKLGATMAALKNVSRDRVLDAFDAFFIE-AEDLPLDIDS 71 Query: 61 DEYIRSVLTKALGDDKATSLLNRILGGRDASGIESLKWMDAQSVAELIRNEHPQIIATIL 120 +EYIRSV KALGDD+A ++++RIL G D SGIE LKWMDA SVAELIRNEHPQIIATIL Sbjct: 72 NEYIRSVFRKALGDDRAANIIDRILSGGDTSGIEGLKWMDASSVAELIRNEHPQIIATIL 131 Query: 121 VHLERDHACGIINNFTERLRNDVILRIATLDGVQPAALRELNDVLTKLLTGNESLKKQQM 180 VHL+RD A I+ FTERLRND +LRIATLDG+QP+ALRELN+VLT LL GN+ KK + Sbjct: 132 VHLDRDQASEILTYFTERLRNDTVLRIATLDGIQPSALRELNEVLTGLLQGNDHRKKSTL 191 Query: 181 GGIRTAAEILNFMSGENETSVMNNLRSYDEDMAQKIMDEMFVFENIIDIDGRGIQLLLRE 240 GG+ TAAEILN + E++V+ +RS D ++A I+++MFVF+N+ID+D R +Q LLRE Sbjct: 192 GGVLTAAEILNLVPSAVESAVIEGVRSRDPELADAIVEKMFVFDNLIDLDNRSLQSLLRE 251 Query: 241 VQSESLIVALKGASQGLRDKIFANMSQRAAEMMKEDLESKGPVRLSEVDAQQKAILQIVR 300 V + L+VALKGA Q RDK+FANMSQRA +M+KE+LE GPV++SEV+ QQK ILQI R Sbjct: 252 VGQDVLVVALKGAKQEFRDKVFANMSQRAGQMLKEELEVLGPVKVSEVETQQKEILQIAR 311 Query: 301 RLADEGQIVLGAKGEDAFI 319 RLADEG+I +G K EDA++ Sbjct: 312 RLADEGEITIGRKAEDAYV 330 >STM1970 [N] COG1536 Flagellar motor switch protein Sty Salmonella typhimurium LT2 Length = 331 Score = 352 bits (902), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 177/320 (55%), Positives = 249/320 (77%), Gaps = 3/320 (0%) Query: 1 MLALGEDEAAEVMKYLGPKEVQKLGAAMSALRNVSFEEINEVLEAFVAETGQASSLGLDS 60 ++ +GED AAEV K+L +EVQ L AM+ +R +S +++ +VL F E Q ++L +++ Sbjct: 14 LMTIGEDRAAEVFKHLSTREVQALSTAMANVRQISNKQLTDVLSEFEQEAEQFAALNINA 73 Query: 61 DEYIRSVLTKALGDDKATSLLNRILGGRDA-SGIESLKWMDAQSVAELIRNEHPQIIATI 119 +EY+RSVL KALG+++A+SLL IL RD SGIE+L +M+ QS A+LIR+EHPQIIATI Sbjct: 74 NEYLRSVLVKALGEERASSLLEDILETRDTTSGIETLNFMEPQSAADLIRDEHPQIIATI 133 Query: 120 LVHLERDHACGIINNFTERLRNDVILRIATLDGVQPAALRELNDVLTKLLTGNESLKKQQ 179 LVHL+R A I+ F ERLR+DV+LRIAT GVQPAAL EL +VL LL G ++LK+ + Sbjct: 134 LVHLKRSQAADILALFDERLRHDVMLRIATFGGVQPAALAELTEVLNGLLDG-QNLKRSK 192 Query: 180 MGGIRTAAEILNFMSGENETSVMNNLRSYDEDMAQKIMDEMFVFENIIDIDGRGIQLLLR 239 MGG+RTAAEI+N M + E +V+ +R +D ++AQKI+DEMF+FEN++D+D R IQ LL+ Sbjct: 193 MGGVRTAAEIINLMKTQQEEAVITAVREFDGELAQKIIDEMFLFENLVDVDDRSIQRLLQ 252 Query: 240 EVQSESLIVALKGASQGLRDKIFANMSQRAAEMMKEDLESKGPVRLSEVDAQQKAILQIV 299 EV SESL++ALKGA LR+K NMSQRAA+++++DL ++GPVRLS+V+ +QKAIL IV Sbjct: 253 EVDSESLLIALKGAEPPLREKFLRNMSQRAADILRDDLANRGPVRLSQVENEQKAILLIV 312 Query: 300 RRLADEGQIVLGAKGEDAFI 319 RRLA+ G++V+G+ GED ++ Sbjct: 313 RRLAETGEMVIGS-GEDTYV 331 >fliG [N] COG1536 Flagellar motor switch protein Eco Escherichia coli K12 Length = 331 Score = 351 bits (901), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 178/320 (55%), Positives = 250/320 (78%), Gaps = 3/320 (0%) Query: 1 MLALGEDEAAEVMKYLGPKEVQKLGAAMSALRNVSFEEINEVLEAFVAETGQASSLGLDS 60 ++ +GED AAEV K+L +EVQ L AAM+ + +S +++ +VL F E Q ++L +++ Sbjct: 14 LMTIGEDRAAEVFKHLSQREVQTLSAAMANVTQISNKQLTDVLAEFEQEAEQFAALNINA 73 Query: 61 DEYIRSVLTKALGDDKATSLLNRILGGRD-ASGIESLKWMDAQSVAELIRNEHPQIIATI 119 ++Y+RSVL KALG+++A SLL IL RD ASGIE+L +M+ QS A+LIR+EHPQIIATI Sbjct: 74 NDYLRSVLVKALGEERAASLLEDILETRDTASGIETLNFMEPQSAADLIRDEHPQIIATI 133 Query: 120 LVHLERDHACGIINNFTERLRNDVILRIATLDGVQPAALRELNDVLTKLLTGNESLKKQQ 179 LVHL+R A I+ F ERLR+DV+LRIAT GVQPAAL EL +VL LL G ++LK+ + Sbjct: 134 LVHLKRAQAADILALFDERLRHDVMLRIATFGGVQPAALAELTEVLNGLLDG-QNLKRSK 192 Query: 180 MGGIRTAAEILNFMSGENETSVMNNLRSYDEDMAQKIMDEMFVFENIIDIDGRGIQLLLR 239 MGG+RTAAEI+N M + E +V+ +R +D ++AQKI+DEMF+FEN++D+D R IQ LL+ Sbjct: 193 MGGVRTAAEIINLMKTQQEEAVITAVREFDGELAQKIIDEMFLFENLVDVDDRSIQRLLQ 252 Query: 240 EVQSESLIVALKGASQGLRDKIFANMSQRAAEMMKEDLESKGPVRLSEVDAQQKAILQIV 299 EV SESL++ALKGA Q LR+K NMSQRAA+++++DL ++GPVRLS+V+ +QKAIL IV Sbjct: 253 EVDSESLLIALKGAEQPLREKFLRNMSQRAADILRDDLANRGPVRLSQVENEQKAILLIV 312 Query: 300 RRLADEGQIVLGAKGEDAFI 319 RRLA+ G++V+G+ GED ++ Sbjct: 313 RRLAETGEMVIGS-GEDTYV 331 >ECs2678 [N] COG1536 Flagellar motor switch protein Ecs Escherichia coli O157:H7 Length = 331 Score = 351 bits (901), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 178/320 (55%), Positives = 250/320 (78%), Gaps = 3/320 (0%) Query: 1 MLALGEDEAAEVMKYLGPKEVQKLGAAMSALRNVSFEEINEVLEAFVAETGQASSLGLDS 60 ++ +GED AAEV K+L +EVQ L AAM+ + +S +++ +VL F E Q ++L +++ Sbjct: 14 LMTIGEDRAAEVFKHLSQREVQTLSAAMANVTQISNKQLTDVLAEFEQEAEQFAALNINA 73 Query: 61 DEYIRSVLTKALGDDKATSLLNRILGGRD-ASGIESLKWMDAQSVAELIRNEHPQIIATI 119 ++Y+RSVL KALG+++A SLL IL RD ASGIE+L +M+ QS A+LIR+EHPQIIATI Sbjct: 74 NDYLRSVLVKALGEERAASLLEDILETRDTASGIETLNFMEPQSAADLIRDEHPQIIATI 133 Query: 120 LVHLERDHACGIINNFTERLRNDVILRIATLDGVQPAALRELNDVLTKLLTGNESLKKQQ 179 LVHL+R A I+ F ERLR+DV+LRIAT GVQPAAL EL +VL LL G ++LK+ + Sbjct: 134 LVHLKRAQAADILALFDERLRHDVMLRIATFGGVQPAALAELTEVLNGLLDG-QNLKRSK 192 Query: 180 MGGIRTAAEILNFMSGENETSVMNNLRSYDEDMAQKIMDEMFVFENIIDIDGRGIQLLLR 239 MGG+RTAAEI+N M + E +V+ +R +D ++AQKI+DEMF+FEN++D+D R IQ LL+ Sbjct: 193 MGGVRTAAEIINLMKTQQEEAVITAVREFDGELAQKIIDEMFLFENLVDVDDRSIQRLLQ 252 Query: 240 EVQSESLIVALKGASQGLRDKIFANMSQRAAEMMKEDLESKGPVRLSEVDAQQKAILQIV 299 EV SESL++ALKGA Q LR+K NMSQRAA+++++DL ++GPVRLS+V+ +QKAIL IV Sbjct: 253 EVDSESLLIALKGAEQPLREKFLRNMSQRAADILRDDLANRGPVRLSQVENEQKAILLIV 312 Query: 300 RRLADEGQIVLGAKGEDAFI 319 RRLA+ G++V+G+ GED ++ Sbjct: 313 RRLAETGEMVIGS-GEDTYV 331 >ZfliG [N] COG1536 Flagellar motor switch protein EcZ Escherichia coli O157:H7 EDL933 Length = 331 Score = 350 bits (898), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 178/320 (55%), Positives = 249/320 (77%), Gaps = 3/320 (0%) Query: 1 MLALGEDEAAEVMKYLGPKEVQKLGAAMSALRNVSFEEINEVLEAFVAETGQASSLGLDS 60 ++ +GED AAEV K+L +EVQ L AAM+ + +S +++ +VL F E Q ++L +++ Sbjct: 14 LMTIGEDRAAEVFKHLSQREVQTLSAAMANVTQISNKQLTDVLAEFEQEAEQFAALNINA 73 Query: 61 DEYIRSVLTKALGDDKATSLLNRILGGRD-ASGIESLKWMDAQSVAELIRNEHPQIIATI 119 ++Y RSVL KALG+++A SLL IL RD ASGIE+L +M+ QS A+LIR+EHPQIIATI Sbjct: 74 NDYXRSVLVKALGEERAASLLEDILETRDTASGIETLNFMEPQSAADLIRDEHPQIIATI 133 Query: 120 LVHLERDHACGIINNFTERLRNDVILRIATLDGVQPAALRELNDVLTKLLTGNESLKKQQ 179 LVHL+R A I+ F ERLR+DV+LRIAT GVQPAAL EL +VL LL G ++LK+ + Sbjct: 134 LVHLKRAQAADILALFDERLRHDVMLRIATFGGVQPAALAELTEVLNGLLDG-QNLKRSK 192 Query: 180 MGGIRTAAEILNFMSGENETSVMNNLRSYDEDMAQKIMDEMFVFENIIDIDGRGIQLLLR 239 MGG+RTAAEI+N M + E +V+ +R +D ++AQKI+DEMF+FEN++D+D R IQ LL+ Sbjct: 193 MGGVRTAAEIINLMKTQQEEAVITAVREFDGELAQKIIDEMFLFENLVDVDDRSIQRLLQ 252 Query: 240 EVQSESLIVALKGASQGLRDKIFANMSQRAAEMMKEDLESKGPVRLSEVDAQQKAILQIV 299 EV SESL++ALKGA Q LR+K NMSQRAA+++++DL ++GPVRLS+V+ +QKAIL IV Sbjct: 253 EVDSESLLIALKGAEQPLREKFLRNMSQRAADILRDDLANRGPVRLSQVENEQKAILLIV 312 Query: 300 RRLADEGQIVLGAKGEDAFI 319 RRLA+ G++V+G+ GED ++ Sbjct: 313 RRLAETGEMVIGS-GEDTYV 331 >YPO1829 [N] COG1536 Flagellar motor switch protein Ype Yersinia pestis Length = 330 Score = 345 bits (886), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 173/320 (54%), Positives = 247/320 (77%), Gaps = 3/320 (0%) Query: 1 MLALGEDEAAEVMKYLGPKEVQKLGAAMSALRNVSFEEINEVLEAFVAETGQASSLGLDS 60 ++ LGED AAEV K+L +EVQ+L M+++R VS +++ +VL F + Q ++L +++ Sbjct: 13 LMTLGEDHAAEVFKHLSSREVQQLSTTMASMRQVSHQQLVDVLAEFEDDAEQYAALSVNA 72 Query: 61 DEYIRSVLTKALGDDKATSLLNRILGGRDA-SGIESLKWMDAQSVAELIRNEHPQIIATI 119 +Y+RSVL KALG+++A+SLL IL R+ SG+E+L +M+ Q A+LIR+EHPQIIATI Sbjct: 73 SDYLRSVLIKALGEERASSLLEDILESRETTSGMETLNFMEPQMAADLIRDEHPQIIATI 132 Query: 120 LVHLERDHACGIINNFTERLRNDVILRIATLDGVQPAALRELNDVLTKLLTGNESLKKQQ 179 LVHL+R A I+ F ERLRNDV+LRIAT GVQPAAL EL +VL LL G ++LK+ + Sbjct: 133 LVHLKRAQAADILALFDERLRNDVMLRIATFGGVQPAALAELTEVLNNLLDG-QNLKRSK 191 Query: 180 MGGIRTAAEILNFMSGENETSVMNNLRSYDEDMAQKIMDEMFVFENIIDIDGRGIQLLLR 239 MGGIRTAAEI+N M + E +VM+ +R YD ++AQKI+DEMF+FEN++ +D R IQ LL+ Sbjct: 192 MGGIRTAAEIINLMKTQQEETVMDAVREYDGELAQKIIDEMFLFENLVSVDDRSIQRLLQ 251 Query: 240 EVQSESLIVALKGASQGLRDKIFANMSQRAAEMMKEDLESKGPVRLSEVDAQQKAILQIV 299 E+ +ESL++ALKGA Q LR++ +NMS RAAE++++DL ++GPVR+S V+ +QK+IL IV Sbjct: 252 EIDNESLLIALKGADQALRERFLSNMSLRAAEILRDDLATRGPVRMSLVENEQKSILLIV 311 Query: 300 RRLADEGQIVLGAKGEDAFI 319 RRLA+ G+IV+G GED ++ Sbjct: 312 RRLAESGEIVIGG-GEDIYV 330 >PA1102 [N] COG1536 Flagellar motor switch protein Pae Pseudomonas aeruginosa Length = 338 Score = 338 bits (867), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 156/319 (48%), Positives = 245/319 (76%) Query: 1 MLALGEDEAAEVMKYLGPKEVQKLGAAMSALRNVSFEEINEVLEAFVAETGQASSLGLDS 60 +L+LGE +AA+V++++GPKEVQ++G AM+++RNV E++ +V+ FV G +SLG+ + Sbjct: 20 LLSLGETDAAQVLRHMGPKEVQRVGVAMASMRNVHREQVEQVMGEFVEVVGDQTSLGVGA 79 Query: 61 DEYIRSVLTKALGDDKATSLLNRILGGRDASGIESLKWMDAQSVAELIRNEHPQIIATIL 120 D YIR +LT+ALG+DKA +L++RIL G SG++SLKWM+ ++VA++IR EHPQI A ++ Sbjct: 80 DGYIRKMLTQALGEDKANNLIDRILLGGSTSGLDSLKWMEPRAVADVIRYEHPQIQAIVV 139 Query: 121 VHLERDHACGIINNFTERLRNDVILRIATLDGVQPAALRELNDVLTKLLTGNESLKKQQM 180 +L+ D A ++++F ++R D++LR+++L+ VQP+AL+ELN +L K GN + + M Sbjct: 140 AYLDPDQAAEVLSHFDHKVRLDIVLRVSSLNTVQPSALKELNLILEKQFAGNSNATRTTM 199 Query: 181 GGIRTAAEILNFMSGENETSVMNNLRSYDEDMAQKIMDEMFVFENIIDIDGRGIQLLLRE 240 GG++ AA+I+N++ E +M+++R DED++ +I D MFVF+N+ D+D RGIQ LLRE Sbjct: 200 GGVKRAADIMNYLDSSIEGQLMDSIREVDEDLSGQIEDLMFVFDNLADVDDRGIQALLRE 259 Query: 241 VQSESLIVALKGASQGLRDKIFANMSQRAAEMMKEDLESKGPVRLSEVDAQQKAILQIVR 300 V S+ L++ALKG+ + +R+K+F NMS+RAAE++++DLE+KGPVR+SEV+ QK IL I R Sbjct: 260 VSSDVLVLALKGSDEAIREKVFKNMSKRAAELLRDDLEAKGPVRVSEVEGAQKEILTIAR 319 Query: 301 RLADEGQIVLGAKGEDAFI 319 R+A+ G IVLG KG + I Sbjct: 320 RMAESGDIVLGGKGGEEMI 338 >VC2132 [N] COG1536 Flagellar motor switch protein Vch Vibrio cholerae Length = 348 Score = 285 bits (729), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 142/319 (44%), Positives = 229/319 (71%), Gaps = 1/319 (0%) Query: 1 MLALGEDEAAEVMKYLGPKEVQKLGAAMSALRNVSFEEINEVLEAFVAETGQASSLGLDS 60 +L+L E++AA ++++L PK+VQ++G+AM+ +++S +++ V AF+ + + +++G+ S Sbjct: 31 LLSLNEEDAAGIIRHLEPKQVQRVGSAMARAKDLSQTKVSAVHRAFLEDIQKYTNIGMGS 90 Query: 61 DEYIRSVLTKALGDDKATSLLNRILGGRDASGIESLKWMDAQSVAELIRNEHPQIIATIL 120 ++++R+ L ALG DKA +L+++IL G + G++SLKWMD + VA +I NEHPQI +L Sbjct: 91 EDFLRNALVAALGADKANNLVDQILLGTGSKGLDSLKWMDPRQVASIIINEHPQIQTIVL 150 Query: 121 VHLERDHACGIINNFTERLRNDVILRIATLDGVQPAALRELNDVLTKLLTGNESLKKQQM 180 +LE D + I+ F +R D+++RIA L+ VQP+AL ELN+++ K G + ++ Sbjct: 151 SYLEPDQSAEILAQFAQRDALDLLMRIANLEEVQPSALAELNEIMEKQFAGQAGAQAAKI 210 Query: 181 GGIRTAAEILNFMSGENETSVMNNLRSYDEDMAQKIMDEMFVFENIIDIDGRGIQLLLRE 240 GG++ AA+I+N++ E+ +M +R DED+A +I D MFVFEN++++D +GIQ LLR+ Sbjct: 211 GGLKAAADIMNYLDNNIESVLMEGMREKDEDLATQIQDLMFVFENLVEVDDQGIQKLLRD 270 Query: 241 VQSESLIVALKGASQGLRDKIFANMSQRAAEMMKEDLESKGPVRLSEVDAQQKAILQIVR 300 V + L ALKGA LR+KIF NMS+RAAEMMK+DLE+ P+++S+V+A QK IL I R Sbjct: 271 VPQDVLQKALKGADDTLREKIFKNMSKRAAEMMKDDLEAMPPIKVSDVEAAQKEILSIAR 330 Query: 301 RLADEGQIVLGAKGEDAFI 319 R+AD G+I+LG G D F+ Sbjct: 331 RMADNGEIMLGG-GADEFL 348 >BU074 [N] COG1536 Flagellar motor switch protein Buc Buchnera sp. APS Length = 331 Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 117/313 (37%), Positives = 201/313 (64%), Gaps = 5/313 (1%) Query: 1 MLALGEDEAAEVMKYLGPKEVQKLGAAMSALRNVSFEEINEVL-EAF-VAETGQASSLGL 58 ++A+G D+A E++K+L P EVQ+L AM ++ VS +++NE+L + + +A A + Sbjct: 13 LMAIGSDQAGEILKHLTPFEVQELITAMVNIKRVSAQKLNEILLQCYNLAIKNNAFNCN- 71 Query: 59 DSDEYIRSVLTKALGDDKATSLLNRILGGRDAS-GIESLKWMDAQSVAELIRNEHPQIIA 117 +SD+Y+ +LTKALG+ K TSLL L R+A I++L +M A+ VA L+ EHPQII Sbjct: 72 NSDKYLIKMLTKALGEKKGTSLLKEALEIRNARICIKALNYMKAKQVAFLLDKEHPQIIT 131 Query: 118 TILVHLERDHACGIINNFTERLRNDVILRIATLDGVQPAALRELNDVLTKLLTGNESLKK 177 TIL+ L ++ + +++ +++ R ++ILRI G++ ++L EL V+ LL N+ L Sbjct: 132 TILICLNKNQSAEVLSFLSDKKRAEIILRIVDFHGIEESSLVELTQVINNLL-KNKKLIL 190 Query: 178 QQMGGIRTAAEILNFMSGENETSVMNNLRSYDEDMAQKIMDEMFVFENIIDIDGRGIQLL 237 + GGI+TAA+ILN M ++E ++ N+ +E +A KI+ E+F+FEN++D+D + I++L Sbjct: 191 SEKGGIKTAAQILNSMKIKHEKEIIENISKSNEQLADKIIKEIFLFENLVDLDDKYIKIL 250 Query: 238 LREVQSESLIVALKGASQGLRDKIFANMSQRAAEMMKEDLESKGPVRLSEVDAQQKAILQ 297 L ++ E L +AL+ SQ +R+K F NMS + + +LE K + + +QK IL Sbjct: 251 LENIEKEKLHIALQNTSQAIREKFFKNMSHTESNELTLNLEKKSYISDISIKNEQKLILI 310 Query: 298 IVRRLADEGQIVL 310 +++ + + G+I L Sbjct: 311 MLKSIVENGRISL 323 >TM0220 [N] COG1536 Flagellar motor switch protein Tma Thermotoga maritima Length = 335 Score = 209 bits (531), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 117/319 (36%), Positives = 191/319 (59%) Query: 1 MLALGEDEAAEVMKYLGPKEVQKLGAAMSALRNVSFEEINEVLEAFVAETGQASSLGLDS 60 ++ALG ++AA+VMK+L + V++L ++ + V+ EE +VLE F++ + Sbjct: 16 LVALGPEKAAQVMKHLDEETVEQLVVEIANIGRVTPEEKKQVLEEFLSLAKAKEMISEGG 75 Query: 61 DEYIRSVLTKALGDDKATSLLNRILGGRDASGIESLKWMDAQSVAELIRNEHPQIIATIL 120 EY + VL KA G ++A ++ R+ ++ D + +++EHPQ IA +L Sbjct: 76 IEYAKKVLEKAFGPERARKIIERLTSSLQVKPFSFVRDTDPVQLVNFLQSEHPQTIAVVL 135 Query: 121 VHLERDHACGIINNFTERLRNDVILRIATLDGVQPAALRELNDVLTKLLTGNESLKKQQM 180 +L+ A I+ E L+ +V+ RIA L+ P ++E+ L K ++G S ++ Sbjct: 136 SYLDPPVAAQILGALPEELQTEVLKRIALLERTSPEVVKEIERNLEKKISGFVSRTFSKV 195 Query: 181 GGIRTAAEILNFMSGENETSVMNNLRSYDEDMAQKIMDEMFVFENIIDIDGRGIQLLLRE 240 GGI TAAEI+N + E +M+ L + ++A +I MFVFE+I+ +D R IQL+LRE Sbjct: 196 GGIDTAAEIMNNLDRTTEKKIMDKLVQENPELADEIRRRMFVFEDILKLDDRSIQLVLRE 255 Query: 241 VQSESLIVALKGASQGLRDKIFANMSQRAAEMMKEDLESKGPVRLSEVDAQQKAILQIVR 300 V + L +ALKGAS L++KIF NMS+RAA ++K++LE GPVRL +V+ Q+ I+ I+R Sbjct: 256 VDTRDLALALKGASDELKEKIFKNMSKRAAALLKDELEYMGPVRLKDVEEAQQKIINIIR 315 Query: 301 RLADEGQIVLGAKGEDAFI 319 RL + G+IV+ G + I Sbjct: 316 RLEEAGEIVIARGGGEELI 334