BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0060.p (89 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp0374 [NU] COG1987 Flagellar biosynthesis pathway, component F... 116 1e-26 BU083 [NU] COG1987 Flagellar biosynthesis pathway, component Fli... 98 5e-21 STM1980 [NU] COG1987 Flagellar biosynthesis pathway, component F... 98 6e-21 YPO1820a [NU] COG1987 Flagellar biosynthesis pathway, component ... 97 7e-21 BS_fliQ [NU] COG1987 Flagellar biosynthesis pathway, component F... 92 3e-19 PA1447 [NU] COG1987 Flagellar biosynthesis pathway, component Fl... 86 2e-17 fliQ [NU] COG1987 Flagellar biosynthesis pathway, component FliQ... 80 9e-16 ZfliQ [NU] COG1987 Flagellar biosynthesis pathway, component Fli... 80 9e-16 ECs2688 [NU] COG1987 Flagellar biosynthesis pathway, component F... 80 9e-16 VC2122 [NU] COG1987 Flagellar biosynthesis pathway, component Fl... 74 9e-14 >RSp0374 [NU] COG1987 Flagellar biosynthesis pathway, component FliQ Rso Ralstonia solanacearum Length = 89 Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 54/89 (60%), Positives = 70/89 (78%) Query: 1 MTPESVMTMGRQAMEITLLIAAPMLLTALLIGLLVSIFQAATQINEQTLAFIPKLLGVFL 60 MTPE V+ M RQAM++ ++I APMLL +L++GLLV++FQAATQ+NEQTL+FIPKLL V Sbjct: 1 MTPEYVLNMARQAMQVAMMIGAPMLLVSLIVGLLVAVFQAATQLNEQTLSFIPKLLAVAA 60 Query: 61 AMIVAGPWILTVIVDYMHTMFSGIPAMVQ 89 MI+AGPW+L VIVDY + + IP V Sbjct: 61 TMILAGPWVLGVIVDYTRDVLTNIPNYVN 89 >BU083 [NU] COG1987 Flagellar biosynthesis pathway, component FliQ Buc Buchnera sp. APS Length = 89 Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 45/84 (53%), Positives = 65/84 (77%) Query: 1 MTPESVMTMGRQAMEITLLIAAPMLLTALLIGLLVSIFQAATQINEQTLAFIPKLLGVFL 60 MT E VM + AM++ L+IA+P+LL AL+ GL++SI QAATQ+NEQTL+FIPK++ V Sbjct: 1 MTSEYVMELFYNAMKVALIIASPLLLAALISGLIISILQAATQVNEQTLSFIPKIISVLG 60 Query: 61 AMIVAGPWILTVIVDYMHTMFSGI 84 + + GPW+L V++DYMH +F+ I Sbjct: 61 VISILGPWMLGVMLDYMHNLFNNI 84 >STM1980 [NU] COG1987 Flagellar biosynthesis pathway, component FliQ Sty Salmonella typhimurium LT2 Length = 89 Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 53/88 (60%), Positives = 75/88 (85%) Query: 1 MTPESVMTMGRQAMEITLLIAAPMLLTALLIGLLVSIFQAATQINEQTLAFIPKLLGVFL 60 MTPESVM MG +AM++ L +AAP+LL AL+ GL++SI QAATQINE TL+FIPK++ VF+ Sbjct: 1 MTPESVMMMGTEAMKVALALAAPLLLVALITGLIISILQAATQINEMTLSFIPKIVAVFI 60 Query: 61 AMIVAGPWILTVIVDYMHTMFSGIPAMV 88 A+IVAGPW+L +++DY+ T+FS +P ++ Sbjct: 61 AIIVAGPWMLNLLLDYVRTLFSNLPYII 88 >YPO1820a [NU] COG1987 Flagellar biosynthesis pathway, component FliQ Ype Yersinia pestis Length = 89 Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 52/88 (59%), Positives = 72/88 (81%) Query: 1 MTPESVMTMGRQAMEITLLIAAPMLLTALLIGLLVSIFQAATQINEQTLAFIPKLLGVFL 60 MTPESVM +G +AM+I L +AAP+LL AL+ GL+VS+ QAATQINE TL+FIPK+L VF Sbjct: 1 MTPESVMALGTEAMKIALALAAPLLLAALISGLIVSLLQAATQINEMTLSFIPKILAVFT 60 Query: 61 AMIVAGPWILTVIVDYMHTMFSGIPAMV 88 M++AGPW+L +I+DYM +F+ +P ++ Sbjct: 61 TMVIAGPWMLNLILDYMRNLFTSLPTLI 88 >BS_fliQ [NU] COG1987 Flagellar biosynthesis pathway, component FliQ Bsu Bacillus subtilis Length = 89 Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 44/84 (52%), Positives = 64/84 (76%) Query: 1 MTPESVMTMGRQAMEITLLIAAPMLLTALLIGLLVSIFQAATQINEQTLAFIPKLLGVFL 60 M+ E V++M +A+ +TL+I+ P+L ALL+GL+VSIFQA TQI EQTLAFIPK++ V L Sbjct: 1 MSSEFVISMAEKAVYVTLMISGPLLAIALLVGLIVSIFQATTQIQEQTLAFIPKIVAVLL 60 Query: 61 AMIVAGPWILTVIVDYMHTMFSGI 84 A+I GPW+L+ I+ + +FS + Sbjct: 61 ALIFFGPWMLSTILSFTTELFSNL 84 >PA1447 [NU] COG1987 Flagellar biosynthesis pathway, component FliQ Pae Pseudomonas aeruginosa Length = 89 Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 39/88 (44%), Positives = 66/88 (75%) Query: 1 MTPESVMTMGRQAMEITLLIAAPMLLTALLIGLLVSIFQAATQINEQTLAFIPKLLGVFL 60 MTPE + + R+A+ +T +I +++ +LL+GL+V++FQAATQINEQTL+F+P+L+ + L Sbjct: 1 MTPEVALDLFREALWLTAMIVGVLVVPSLLVGLVVAMFQAATQINEQTLSFLPRLMVILL 60 Query: 61 AMIVAGPWILTVIVDYMHTMFSGIPAMV 88 +IV GPW+L +++Y T+ IP ++ Sbjct: 61 TLIVLGPWLLRQLMEYTQTLIGNIPLLI 88 >fliQ [NU] COG1987 Flagellar biosynthesis pathway, component FliQ Eco Escherichia coli K12 Length = 89 Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 51/88 (57%), Positives = 75/88 (85%) Query: 1 MTPESVMTMGRQAMEITLLIAAPMLLTALLIGLLVSIFQAATQINEQTLAFIPKLLGVFL 60 MTPESVM MG +AM++ L +AAP+LL AL+ GL++SI QAATQINE TL+FIPK++ VF+ Sbjct: 1 MTPESVMMMGTEAMKVALALAAPLLLVALVTGLIISILQAATQINEMTLSFIPKIIAVFI 60 Query: 61 AMIVAGPWILTVIVDYMHTMFSGIPAMV 88 A+I+AGPW+L +++DY+ T+F+ +P ++ Sbjct: 61 AIIIAGPWMLNLLLDYVRTLFTNLPYII 88 >ZfliQ [NU] COG1987 Flagellar biosynthesis pathway, component FliQ EcZ Escherichia coli O157:H7 EDL933 Length = 89 Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 51/88 (57%), Positives = 75/88 (85%) Query: 1 MTPESVMTMGRQAMEITLLIAAPMLLTALLIGLLVSIFQAATQINEQTLAFIPKLLGVFL 60 MTPESVM MG +AM++ L +AAP+LL AL+ GL++SI QAATQINE TL+FIPK++ VF+ Sbjct: 1 MTPESVMMMGTEAMKVALALAAPLLLVALVTGLIISILQAATQINEMTLSFIPKIIAVFI 60 Query: 61 AMIVAGPWILTVIVDYMHTMFSGIPAMV 88 A+I+AGPW+L +++DY+ T+F+ +P ++ Sbjct: 61 AIIIAGPWMLNLLLDYVRTLFTNLPYII 88 >ECs2688 [NU] COG1987 Flagellar biosynthesis pathway, component FliQ Ecs Escherichia coli O157:H7 Length = 89 Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 51/88 (57%), Positives = 75/88 (85%) Query: 1 MTPESVMTMGRQAMEITLLIAAPMLLTALLIGLLVSIFQAATQINEQTLAFIPKLLGVFL 60 MTPESVM MG +AM++ L +AAP+LL AL+ GL++SI QAATQINE TL+FIPK++ VF+ Sbjct: 1 MTPESVMMMGTEAMKVALALAAPLLLVALVTGLIISILQAATQINEMTLSFIPKIIAVFI 60 Query: 61 AMIVAGPWILTVIVDYMHTMFSGIPAMV 88 A+I+AGPW+L +++DY+ T+F+ +P ++ Sbjct: 61 AIIIAGPWMLNLLLDYVRTLFTNLPYII 88 >VC2122 [NU] COG1987 Flagellar biosynthesis pathway, component FliQ Vch Vibrio cholerae Length = 89 Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 62/85 (72%) Query: 1 MTPESVMTMGRQAMEITLLIAAPMLLTALLIGLLVSIFQAATQINEQTLAFIPKLLGVFL 60 MTPE + + ++++ + L++ +++ +LL+GL+V+IFQAAT INEQTL+F+P+L+ L Sbjct: 1 MTPEIFVELFKESLWLVLIMVCAIIIPSLLVGLVVAIFQAATSINEQTLSFLPRLIITLL 60 Query: 61 AMIVAGPWILTVIVDYMHTMFSGIP 85 A++ G W+ +++D+ ++M +P Sbjct: 61 ALMFFGHWMTQILMDFFYSMIERMP 85