BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0022.p (1333 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0454_1 [C] COG0277 FAD/FMN-containing dehydrogenases Rso Rals... 1223 0.0 NMB0998_1 [C] COG0277 FAD/FMN-containing dehydrogenases Nme Neis... 925 0.0 NMA1206_1 [C] COG0277 FAD/FMN-containing dehydrogenases NmA Neis... 925 0.0 RSc0454_2 [C] COG0247 Fe-S oxidoreductase Rso Ralstonia solanace... 902 0.0 NMB0998_2 [C] COG0247 Fe-S oxidoreductase Nme Neisseria meningit... 669 0.0 NMA1206_2 [C] COG0247 Fe-S oxidoreductase NmA Neisseria meningit... 669 0.0 Cj1213c [C] COG0277 FAD/FMN-containing dehydrogenases Cje Campyl... 102 8e-21 aq_1769 [C] COG0277 FAD/FMN-containing dehydrogenases Aae Aquife... 95 1e-18 AGc1189 [C] COG0277 FAD/FMN-containing dehydrogenases Atu Agroba... 93 4e-18 jhp0459 [C] COG0277 FAD/FMN-containing dehydrogenases jHp Helico... 92 9e-18 >RSc0454_1 [C] COG0277 FAD/FMN-containing dehydrogenases Rso Ralstonia solanacearum Length = 825 Score = 1223 bits (3164), Expect = 0.0, Method: Compositional matrix adjust. Identities = 630/840 (75%), Positives = 707/840 (84%), Gaps = 18/840 (2%) Query: 1 MNAPAQIQALLTDAPHGA--TPPRLREIPYNYTSFSDREIVIRLLGEESWSLLDELRGKR 58 MNAP LL DA A PRLREIPYNYTSFSDREIVIRLLGE +W +LDELR +R Sbjct: 1 MNAP-----LLIDAKLAAQDAAPRLREIPYNYTSFSDREIVIRLLGESAWQILDELRSER 55 Query: 59 QTGRSARMLYEVLGDIWVVRRNPYLQDDLLDNPKRRAALIEALNHRLGEVDKRRLATDQA 118 +TGRSARMLYEVLGDIWVVRRNPYLQDDLLDNPKRR LI+ALNHRL E++KRR A DQ Sbjct: 56 RTGRSARMLYEVLGDIWVVRRNPYLQDDLLDNPKRRQMLIDALNHRLAEIEKRRTA-DQT 114 Query: 119 EAGDAEAQRRSASVEALLKAAKKAIADFAEEFRQTYDLRKRATKVLGRFTAKDNIKFDGL 178 D E+ RS VE L+ A++A+ F +EF Q YDLR+RA KVLGR TAKDNIKFDGL Sbjct: 115 AHNDPESDERSRKVEQLVVHARRAVKAFEDEFAQVYDLRRRAQKVLGRVTAKDNIKFDGL 174 Query: 179 SRVSHVTDATDWRVEYPFVVLTPDTEDEMAGLVKACIELGLTIIPRGGGTGYTGGAIPLT 238 SRVSHVTDATDWRVEYPFVVL PDTEDE+AG+VK C ELGLTIIPRGGGTGYTGGA+PLT Sbjct: 175 SRVSHVTDATDWRVEYPFVVLAPDTEDEVAGIVKGCFELGLTIIPRGGGTGYTGGAVPLT 234 Query: 239 PLSAVINTEKLEQLGAVEMEILPGLDKPYATIYSGAGVVTKRVSDAAEKAGFVFAVDPTS 298 P SAVINTEKLE+L AVEM LPG+D P ATIYS AGVVT+RV++AAE+AG VFAVDPTS Sbjct: 235 PFSAVINTEKLERLDAVEMTDLPGVDHPVATIYSAAGVVTRRVAEAAERAGLVFAVDPTS 294 Query: 299 AEASCIGGNVAMNAGGKKAVLWGTALDNLASWRMVDPQGDWLEVTRLDHNLGKIHDVEVA 358 +ASCIGGNVAMNAGGKKAVLWGTALDNLA WRMVDP G+WLEVTRLDHNLGKIHD VA Sbjct: 295 IDASCIGGNVAMNAGGKKAVLWGTALDNLAWWRMVDPDGNWLEVTRLDHNLGKIHDAPVA 354 Query: 359 RFKLEWSHPGEKGQKTEVFKTEILEISGKKFRKEGLGKDVTDKFLSGLPGVQKEGCDGLI 418 F+L+W G ++ +TE L I G+KFRKEGLGKDVTDKFL+GLPGVQKEGCDG+I Sbjct: 355 TFELKW-FDGNAPVGSKPLRTESLTIEGRKFRKEGLGKDVTDKFLAGLPGVQKEGCDGII 413 Query: 419 TSARWILHKMPKQTRTVCLEFFGQARDAIPSIVEIKDYLDAETKK-GGAILAGLEHLDER 477 TSARW+LH+MPK RTVCLEFFGQARDAIPSIVEIKDYLDAETKK GGAILAGLEHLDER Sbjct: 414 TSARWVLHRMPKSIRTVCLEFFGQARDAIPSIVEIKDYLDAETKKPGGAILAGLEHLDER 473 Query: 478 YLRAVGYATKSKRGVLPKMVLIGDIVGDDENAVAAAASEVIRMANNRVGEGFVAVSPEAR 537 YLRAVGYATKSKR PKMVLIGDIVGDD++AVA A SEVIR+AN + GEGFVAVSPEAR Sbjct: 474 YLRAVGYATKSKRNAFPKMVLIGDIVGDDDDAVARATSEVIRLANGKSGEGFVAVSPEAR 533 Query: 538 KKFWLDRSRTAAIAKHTNAFKINEDVVIPLNRMGEYTDGIERINIELSIKNKLQLLAELD 597 KKFWLDRSRTAAIAKHTNAFKINEDVVIPL RMGEYTDGIERINIELS+KNKL+L L Sbjct: 534 KKFWLDRSRTAAIAKHTNAFKINEDVVIPLPRMGEYTDGIERINIELSVKNKLKLADALL 593 Query: 598 SFFVKGNLPLGKSDDAEGDDIPAAEMLEDRVHQAESLLEQTHARWSYLLANLDKPLGEAK 657 +FF + +LPLG++DDA ++IP+AE+LEDRV QA+ LL T ARW YLL +LD P+ A+ Sbjct: 594 AFFARTDLPLGRTDDA--NEIPSAELLEDRVQQAQQLLRATRARWQYLLDHLDTPVNAAR 651 Query: 658 GELAALGLEKMLPVFEQRLVDQPEAAVFHVVQDRTVRISWKQEVRAQLRQIFSGAAFKLI 717 L LGL + ++RL QP+A +FH++QDRT+R+SWK E+RA+LR+IF+G FK I Sbjct: 652 ASLIGLGLGYLAQTIDERLQVQPDANLFHLLQDRTIRVSWKTEIRAELRKIFNGGEFKPI 711 Query: 718 LEECQAIHKRVLRGRVFVALHMHAGDGNVHTNIPVNSDHYEMLQDAHVAVARIMKLARSL 777 L+E QAIHK+VLRGRVFVALHMHAGDGNVHTN+PVNSD Y+MLQDAH AVARIM LARSL Sbjct: 712 LDEAQAIHKQVLRGRVFVALHMHAGDGNVHTNLPVNSDDYDMLQDAHKAVARIMTLARSL 771 Query: 778 NGVISGEHGIGITKLEFLTEDEIGEFRAYKKRVDPEGRFNKGKLLNLPGMEADLSNAYTP 837 +GVISGEHGIGITKLEFLT+DEI +F AYK+RVDP GRFNKGKLL DL++ P Sbjct: 772 DGVISGEHGIGITKLEFLTDDEIADFAAYKRRVDPNGRFNKGKLLR------DLNDPQAP 825 >NMB0998_1 [C] COG0277 FAD/FMN-containing dehydrogenases Nme Neisseria meningitidis MC58 Length = 805 Score = 925 bits (2391), Expect = 0.0, Method: Compositional matrix adjust. Identities = 503/840 (59%), Positives = 601/840 (71%), Gaps = 46/840 (5%) Query: 20 PPRLREIPYNYTSFSDREIVIRLLGEESWSLLDELRGKRQTGRSARMLYEVLGDIWVVRR 79 P R+REIPYNYTS++DREIVIRLLG+E+W +L +LRG+R+TGRSARML+EVLGDIWVV R Sbjct: 7 PQRIREIPYNYTSYTDREIVIRLLGDEAWQILQDLRGQRKTGRSARMLFEVLGDIWVVVR 66 Query: 80 NPYLQDDLLDNPKRRAALIEALNHRLGEVDKRRLATDQAEAGDAEAQRRSASVEALLKAA 139 NPYL DDLL++PKRRAAL+ + HRL E+ KRR Q V+ L+ AA Sbjct: 67 NPYLVDDLLEHPKRRAALVREMRHRLNEIRKRRDDNRQ--------------VDVLVAAA 112 Query: 140 KKAIADFAEEFRQTYDLRKRATKVLGRFTAKDNIKFDGLSRVSHVTDATDWRVEYPFVVL 199 +KA+ F F +T R++ + L + T NI FDGL+RV+HVTDATDWRVEYPFVV+ Sbjct: 113 EKAVERFDSSFDETSQKRRQILERLSKITKPHNIMFDGLARVTHVTDATDWRVEYPFVVV 172 Query: 200 TPDTEDEMAGLVKACIELGLTIIPRGGGTGYTGGAIPLTPLSAVINTEKLEQLGAVEMEI 259 PDTE E+A LV+A IEL L IIPRGGGTGYTGGAIPL SAVINTEKL++ VE Sbjct: 173 NPDTEAEIAPLVRALIELDLVIIPRGGGTGYTGGAIPLDANSAVINTEKLDKHRGVEYVE 232 Query: 260 LPGLDKPYATIYSGAGVVTKRVSDAAEKAGFVFAVDPTSAEASCIGGNVAMNAGGKKAVL 319 L GLD + I GAGVVT+RV + A +AG VFAVDPTSA+ASC+GGNVAMNAGGKKAVL Sbjct: 233 LAGLDGKHPIIRCGAGVVTRRVEETAHQAGLVFAVDPTSADASCVGGNVAMNAGGKKAVL 292 Query: 320 WGTALDNLASWRMVDPQGDWLEVTRLDHNLGKIHDVEVARFKLEWSHPGEKGQKTEVFKT 379 WGTALDNLA W MV+PQG+WL + R+ HN GKIHD E A F + + KT Sbjct: 293 WGTALDNLAYWNMVNPQGEWLRIERVRHNFGKIHDEETAVFDVH----TLDSDGINIVKT 348 Query: 380 EILEISGKKFRKEGLGKDVTDKFLSGLPGVQKEGCDGLITSARWILHKMPKQTRTVCLEF 439 E LEI G KFRK GLGKDVTDKFLSGLPGVQKEG DG+ITS ++LHKMPK TRTVC+EF Sbjct: 349 ERLEIPGHKFRKVGLGKDVTDKFLSGLPGVQKEGTDGIITSVAFVLHKMPKYTRTVCMEF 408 Query: 440 FGQARDAIPSIVEIKDYLDAETKKGGAILAGLEHLDERYLRAVGYATKSKRGVLPKMVLI 499 FG A PSIVEI+D+L A LAGLEHLD RY+RAVGYATK+ PKMVL+ Sbjct: 409 FGTVATATPSIVEIRDFLLAHE---SVRLAGLEHLDWRYVRAVGYATKAAGKGRPKMVLL 465 Query: 500 GDIVGDDENAVAAAASEVIRMANNRVGEGFVAVSPEARKKFWLDRSRTAAIAKHTNAFKI 559 D+V DDE AV AAA + +A R GEGF+AVSPEARK FWLDRSRTAAIAKHTNAFKI Sbjct: 466 ADVVSDDEAAVEAAAEHICELARARDGEGFIAVSPEARKTFWLDRSRTAAIAKHTNAFKI 525 Query: 560 NEDVVIPLNRMGEYTDGIERINIELSIKNKLQLLAELDSFFVKGNLPLGKSDDAEGDDIP 619 NEDVVIPL R+GEY+DGIERINIELSI+NKL+L A L+ + G LP+ D G D+P Sbjct: 526 NEDVVIPLERLGEYSDGIERINIELSIQNKLKLCAALEQYL-SGKLPI----DKMGTDLP 580 Query: 620 AAEMLEDRVHQAESLLEQTHARWSYLLANLDKPLGEAKGELAALGLEKMLPVFEQRLVDQ 679 AE+L +R A + + RW +LLANLD PL + K A + Sbjct: 581 TAELLGERGKHALAHVSAVKTRWEWLLANLDTPLADYKARYGAA------------VHAA 628 Query: 680 PEA----AVFHVVQDRTVRISWKQEVRAQLRQIFSGAAFKLILEECQAIHKRVLRGRVFV 735 PEA + F +D +R+S K +V L +IFSG I++ IH + +R RVFV Sbjct: 629 PEAKNNESCFIAFRDFRLRVSVKADVMKPLSEIFSGKTDTKIIQGLGKIHAKTVRSRVFV 688 Query: 736 ALHMHAGDGNVHTNIPVNSDHYEMLQDAHVAVARIMKLARSLNGVISGEHGIGITKLEFL 795 ALHMHAGDGNVHTNIPVNSD EMLQ A+ +V RIMK+ARSLNGVISGEHGIGITKLEFL Sbjct: 689 ALHMHAGDGNVHTNIPVNSDDAEMLQTAYRSVERIMKIARSLNGVISGEHGIGITKLEFL 748 Query: 796 TEDEIGEFRAYKKRVDPEGRFNKGKLLNLPGMEADLSNAYTPSFGLMGHESLIMQQSDIG 855 +++E+ F YK +VDP+ FN+ KL+ +DL NAYTPSF L+G ESLIM++S++G Sbjct: 749 SDEEMQPFWDYKNQVDPKHTFNRHKLMK----GSDLRNAYTPSFELLGAESLIMEKSNLG 804 >NMA1206_1 [C] COG0277 FAD/FMN-containing dehydrogenases NmA Neisseria meningitidis Z2491 Length = 805 Score = 925 bits (2390), Expect = 0.0, Method: Compositional matrix adjust. Identities = 502/840 (59%), Positives = 602/840 (71%), Gaps = 46/840 (5%) Query: 20 PPRLREIPYNYTSFSDREIVIRLLGEESWSLLDELRGKRQTGRSARMLYEVLGDIWVVRR 79 P R+REIPYNYTS++DREIVIRLLG+E+W +L +LRG+R+TGRSARML+EVLGDIWVV R Sbjct: 7 PQRIREIPYNYTSYTDREIVIRLLGDEAWQILQDLRGQRKTGRSARMLFEVLGDIWVVVR 66 Query: 80 NPYLQDDLLDNPKRRAALIEALNHRLGEVDKRRLATDQAEAGDAEAQRRSASVEALLKAA 139 NPYL DDLL++PKRRAAL+ + HRL E+ KRR Q V+ L+ AA Sbjct: 67 NPYLVDDLLEHPKRRAALVREMRHRLNEIRKRRDDNRQ--------------VDVLVAAA 112 Query: 140 KKAIADFAEEFRQTYDLRKRATKVLGRFTAKDNIKFDGLSRVSHVTDATDWRVEYPFVVL 199 +KA+ F F +T R + + L + T NI FDGL+RV+HVTDATDWRVEYPFVV+ Sbjct: 113 EKAVERFDSSFDETSQKRHQILERLSKITKPHNIMFDGLARVTHVTDATDWRVEYPFVVV 172 Query: 200 TPDTEDEMAGLVKACIELGLTIIPRGGGTGYTGGAIPLTPLSAVINTEKLEQLGAVEMEI 259 PDTE E+A LV+A IEL L IIPRGGGTGYTGGAIPL +SAVINTEKL++ VE Sbjct: 173 NPDTEAEVAPLVRALIELDLVIIPRGGGTGYTGGAIPLDAMSAVINTEKLDKHRGVEFVE 232 Query: 260 LPGLDKPYATIYSGAGVVTKRVSDAAEKAGFVFAVDPTSAEASCIGGNVAMNAGGKKAVL 319 L GLD + I GAGVVT+RV + A +AG VFAVDPTSA+ASC+GGNVAMNAGGKKAVL Sbjct: 233 LAGLDGKHPIIRCGAGVVTRRVEETAHQAGLVFAVDPTSADASCVGGNVAMNAGGKKAVL 292 Query: 320 WGTALDNLASWRMVDPQGDWLEVTRLDHNLGKIHDVEVARFKLEWSHPGEKGQKTEVFKT 379 WGTALDNLA W+MV+PQG+WL + R+ HN GKIHD E A F + + KT Sbjct: 293 WGTALDNLAYWQMVNPQGEWLRIERVRHNFGKIHDEETAVFDVH----TLDSDGINIVKT 348 Query: 380 EILEISGKKFRKEGLGKDVTDKFLSGLPGVQKEGCDGLITSARWILHKMPKQTRTVCLEF 439 E LEI G KFRK GLGKDVTDKFLSGLPGVQKEG DG+IT ++LHKMPK TRTVC+EF Sbjct: 349 ERLEIPGHKFRKVGLGKDVTDKFLSGLPGVQKEGTDGIITGVAFVLHKMPKYTRTVCMEF 408 Query: 440 FGQARDAIPSIVEIKDYLDAETKKGGAILAGLEHLDERYLRAVGYATKSKRGVLPKMVLI 499 FG A PSIVEI+D+L A LAGLEHLD RY+RAVGYATK+ PKMVL+ Sbjct: 409 FGTVATATPSIVEIRDFLLAHD---SVRLAGLEHLDWRYVRAVGYATKAAGKGRPKMVLL 465 Query: 500 GDIVGDDENAVAAAASEVIRMANNRVGEGFVAVSPEARKKFWLDRSRTAAIAKHTNAFKI 559 D+V DDE AV AAA + +A R GEGF+AVSPEARK FWLDRSRTAAIAKHTNAFKI Sbjct: 466 ADVVSDDEAAVEAAAEHICELARARDGEGFIAVSPEARKTFWLDRSRTAAIAKHTNAFKI 525 Query: 560 NEDVVIPLNRMGEYTDGIERINIELSIKNKLQLLAELDSFFVKGNLPLGKSDDAEGDDIP 619 NEDVVIPL R+GEY+DGIERINIELSI+NKL+L A L+ ++ G LP+ D G D+P Sbjct: 526 NEDVVIPLERLGEYSDGIERINIELSIQNKLKLCAALEQ-YLSGKLPI----DKMGTDLP 580 Query: 620 AAEMLEDRVHQAESLLEQTHARWSYLLANLDKPLGEAKGELAALGLEKMLPVFEQRLVDQ 679 AE+L +R A + + ARW +LLANLD PL + K + + Sbjct: 581 TAELLGERGKHALAHVSAVKARWEWLLANLDAPLADYKAR------------YGSAVHAA 628 Query: 680 PEA----AVFHVVQDRTVRISWKQEVRAQLRQIFSGAAFKLILEECQAIHKRVLRGRVFV 735 PEA + F +D +R+S K +V L +IFSG I++ IH + +R RVFV Sbjct: 629 PEAKDNESCFTAFRDFRLRVSVKADVMKPLSEIFSGKTDTKIIQGLGKIHAKTVRSRVFV 688 Query: 736 ALHMHAGDGNVHTNIPVNSDHYEMLQDAHVAVARIMKLARSLNGVISGEHGIGITKLEFL 795 ALHMHAGDGNVHTNIPVNSD EMLQ A+ +V RIMK+ARSL GVISGEHGIGITKLEFL Sbjct: 689 ALHMHAGDGNVHTNIPVNSDDAEMLQTAYRSVERIMKIARSLGGVISGEHGIGITKLEFL 748 Query: 796 TEDEIGEFRAYKKRVDPEGRFNKGKLLNLPGMEADLSNAYTPSFGLMGHESLIMQQSDIG 855 +++E+ F YK +VDP+ FN+ KL+ +DL NAYTPSF L+G ESLIM++SD+G Sbjct: 749 SDEEMQPFWDYKNQVDPKHTFNRHKLMK----GSDLRNAYTPSFELLGAESLIMEKSDLG 804 >RSc0454_2 [C] COG0247 Fe-S oxidoreductase Rso Ralstonia solanacearum Length = 520 Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/519 (80%), Positives = 458/519 (88%), Gaps = 14/519 (2%) Query: 829 ADLSNAYTPSFGLMGHESLIMQQSDIGAIASSVKDCLRCGKCKPVCSTHVPRANLLYSPR 888 ADL NAYTPSFGLMGHES+IMQQSDIGAI+ S+KDCLRCGKCKPVC+THVPRANLLYSPR Sbjct: 2 ADLRNAYTPSFGLMGHESIIMQQSDIGAISDSIKDCLRCGKCKPVCATHVPRANLLYSPR 61 Query: 889 NKILATSLLVEAFLYEEQTRRGVSIKHWEEFEDVADHCTVCHKCVTPCPVDIDFGDVSMN 948 NKILATSLL+EAFLYEEQTRRGVS+KHWEEF DV DHCTVCHKC TPCPV IDFGDVSMN Sbjct: 62 NKILATSLLIEAFLYEEQTRRGVSVKHWEEFADVGDHCTVCHKCATPCPVKIDFGDVSMN 121 Query: 949 MRNLLRKMGKKSFNAGTNAAMFFLNATDPATINATRKVMTQWGFKAQRLGNDLMKKFAKK 1008 MRNLLRKMG+K FN GT A+MFFLNAT+P TIN TRKVM WG+KAQRLG+D++KKFA+K Sbjct: 122 MRNLLRKMGQKKFNPGTAASMFFLNATNPETINLTRKVMIDWGYKAQRLGHDILKKFARK 181 Query: 1009 QTQKPPATVGKPPVKEQVIHFINKKMPGNLPKKTARALLDIEDDKIVPIIRNPKTTTADT 1068 QT PPATVGKPPV+EQVIHFINKKMPGNLPKKTARALLDIED++IVPIIR+PK TT D+ Sbjct: 182 QTAHPPATVGKPPVREQVIHFINKKMPGNLPKKTARALLDIEDNEIVPIIRDPKVTTPDS 241 Query: 1069 EAVFYFPGCGSERLFSQVGLATQAMLWNVGVQTVLPPGYLCCGYPQRGTGDFEKGEKIIT 1128 EAVFYFPGCGSERLFSQVGLATQAMLW+ GVQTVLPPGYLCCGYPQRG G ++K EKI+T Sbjct: 242 EAVFYFPGCGSERLFSQVGLATQAMLWHAGVQTVLPPGYLCCGYPQRGNGQYDKAEKIVT 301 Query: 1129 DNRVLFHRMANTLNYLDIKTVVVSCGTCYDQLQGYEFEKIFPGCRIIDIHEYLLEKGVKL 1188 DNRVLFHR+ANTLNYLDIKTVVVSCGTCYDQL GYEF+KIFPGCRIIDIHE+LLEKGVK+ Sbjct: 302 DNRVLFHRVANTLNYLDIKTVVVSCGTCYDQLAGYEFDKIFPGCRIIDIHEFLLEKGVKI 361 Query: 1189 EGVTGTRYMYHDPCHSPMKQQDPLKTVNSLI---TTVDAQK--IEKNDRCCGESGTFGVS 1243 +GV G RYMYHDPCH+P+K DP K VN L+ D Q IEKNDRCCGESGT VS Sbjct: 362 DGVQGVRYMYHDPCHTPIKTMDPTKLVNQLMGGNKGADGQTRAIEKNDRCCGESGTLAVS 421 Query: 1244 RPDVSTQVRFRKEEEMRKGSDKVR---------ADGFTGDVKILTSCPSCFQGLSRYNED 1294 RPD+STQ+RFRKEEEMRKG+DK+R + F+GDVKILTSCPSC QGLSRY+ED Sbjct: 422 RPDISTQIRFRKEEEMRKGADKLRQLDQASGQGGEAFSGDVKILTSCPSCLQGLSRYSED 481 Query: 1295 AGTTADYIVVEMARHLLGENWMPEYVERANNGGIERILV 1333 A ADYIVVEMARH+LGE W+ +YV AN GGIER+LV Sbjct: 482 ASVQADYIVVEMARHVLGETWLQDYVAHANAGGIERVLV 520 >NMB0998_2 [C] COG0247 Fe-S oxidoreductase Nme Neisseria meningitidis MC58 Length = 472 Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/480 (65%), Positives = 371/480 (77%), Gaps = 11/480 (2%) Query: 857 IASSVKDCLRCGKCKPVCSTHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHW 916 IA SVKDCLRCGKCKPVCSTHVPRANLLYSPRNKIL LL+EAFLYEEQTRRGVSIKH+ Sbjct: 1 IADSVKDCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLIEAFLYEEQTRRGVSIKHF 60 Query: 917 EEFEDVADHCTVCHKCVTPCPVDIDFGDVSMNMRNLLRKMGKKSFNAGTNAAMFFLNATD 976 EE D+ DHCTVCH+CV PCPV+IDFGDV++ +RN L G K F M FLNAT Sbjct: 61 EELMDIGDHCTVCHRCVKPCPVNIDFGDVTVAVRNYLADSGHKRFAPAAAMGMAFLNATG 120 Query: 977 PATINATRKVMTQWGFKAQRLGNDLMKKF---AKKQTQKPPATVGKPPVKEQVIHFINKK 1033 P TI A R M Q GF AQ + K KKQ +P ATVGK P+KEQVIHFIN+ Sbjct: 121 PKTIKALRAAMIQIGFPAQNFAYKIGKLLPIGTKKQKAEPKATVGKAPIKEQVIHFINRP 180 Query: 1034 MPGNLPKKTARALLDIEDDKIVPIIRNPKTTTADTEAVFYFPGCGSERLFSQVGLATQAM 1093 +P N+P KT R+LL IED K +PIIRNP D EAVFYFPGCGSERLFSQ+GLA QAM Sbjct: 181 LPKNVPAKTPRSLLGIEDGKSIPIIRNP-AAPEDAEAVFYFPGCGSERLFSQIGLAVQAM 239 Query: 1094 LWNVGVQTVLPPGYLCCGYPQRGTGDFEKGEKIITDNRVLFHRMANTLNYLDIKTVVVSC 1153 LW+VGVQTVLPPGY+CCGYPQ G+ K E++ T+NRV FHRMANTLNYLDIKTVVVSC Sbjct: 240 LWHVGVQTVLPPGYMCCGYPQDAGGNKAKAEEMSTNNRVAFHRMANTLNYLDIKTVVVSC 299 Query: 1154 GTCYDQLQGYEFEKIFPGCRIIDIHEYLLEKGVKLEGVTGTRYMYHDPCHSPMKQQDPLK 1213 GTCYDQL+ Y FE+IFPGCRIIDIHEYLLEKGVKL+GV G +Y+YHDPCH+P+K + + Sbjct: 300 GTCYDQLEKYRFEEIFPGCRIIDIHEYLLEKGVKLDGVKGQQYLYHDPCHTPIKTMNATQ 359 Query: 1214 TVNSLITTVDAQKIEKNDRCCGESGTFGVSRPDVSTQVRFRKEEEMRKGSDKVRADGFTG 1273 +SL+ QK+ +DRCCGESG F V RPD++TQV+FRK+EE+ K ++ Sbjct: 360 MASSLM----GQKVVLSDRCCGESGMFAVKRPDIATQVKFRKQEEIEKNLKELPQG---E 412 Query: 1274 DVKILTSCPSCFQGLSRYNEDAGTTADYIVVEMARHLLGENWMPEYVERANNGGIERILV 1333 VK+LTSCP+C QGLSRY +D ADYIV+EMA+++LGENW+ E+V++ANNGG+E++L+ Sbjct: 413 PVKMLTSCPACLQGLSRYADDNNMPADYIVIEMAKYILGENWLDEFVKKANNGGVEKVLL 472 >NMA1206_2 [C] COG0247 Fe-S oxidoreductase NmA Neisseria meningitidis Z2491 Length = 472 Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/480 (65%), Positives = 369/480 (76%), Gaps = 11/480 (2%) Query: 857 IASSVKDCLRCGKCKPVCSTHVPRANLLYSPRNKILATSLLVEAFLYEEQTRRGVSIKHW 916 IA SVKDCLRCGKCKPVCSTHVPRANLLYSPRNKIL LL EAFLYEEQTRRGVSIKH+ Sbjct: 1 IADSVKDCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQTRRGVSIKHF 60 Query: 917 EEFEDVADHCTVCHKCVTPCPVDIDFGDVSMNMRNLLRKMGKKSFNAGTNAAMFFLNATD 976 EE D+ DHCTVCH+CV PCPV+IDFGDV++ +RN L G K F M FLNAT Sbjct: 61 EELMDIGDHCTVCHRCVKPCPVNIDFGDVTVAVRNYLADSGHKRFAPAAAMGMAFLNATG 120 Query: 977 PATINATRKVMTQWGFKAQRLGNDLMKKF---AKKQTQKPPATVGKPPVKEQVIHFINKK 1033 P TI A R M Q GF AQ + K KKQ +P ATVGK P+KEQVIHFIN+ Sbjct: 121 PKTIKALRAAMIQTGFPAQNFAYKIGKLLPIGTKKQKAEPKATVGKAPIKEQVIHFINRP 180 Query: 1034 MPGNLPKKTARALLDIEDDKIVPIIRNPKTTTADTEAVFYFPGCGSERLFSQVGLATQAM 1093 +P ++P KT R+LL IED K +PIIRNP D EAVFYFPGCGSERLFSQ+GLA QAM Sbjct: 181 LPKSVPAKTPRSLLGIEDGKSIPIIRNP-AAPEDAEAVFYFPGCGSERLFSQIGLAVQAM 239 Query: 1094 LWNVGVQTVLPPGYLCCGYPQRGTGDFEKGEKIITDNRVLFHRMANTLNYLDIKTVVVSC 1153 LW+VGVQTVLPPGY+CCGYPQ G+ K E++ T+NRV FHRMANTLNYLDIKTVVVSC Sbjct: 240 LWHVGVQTVLPPGYMCCGYPQDAGGNKAKAEEMSTNNRVAFHRMANTLNYLDIKTVVVSC 299 Query: 1154 GTCYDQLQGYEFEKIFPGCRIIDIHEYLLEKGVKLEGVTGTRYMYHDPCHSPMKQQDPLK 1213 GTCYDQL+ Y FE+IFPGCRIIDIHEYLLEKGVKL GV G +Y+YHDPCH+P+K + + Sbjct: 300 GTCYDQLEKYRFEEIFPGCRIIDIHEYLLEKGVKLNGVKGQQYLYHDPCHTPIKTMNATQ 359 Query: 1214 TVNSLITTVDAQKIEKNDRCCGESGTFGVSRPDVSTQVRFRKEEEMRKGSDKVRADGFTG 1273 +SL+ QK+ +DRCCGESG F V RPD++TQV+FRK+EE+ K ++ Sbjct: 360 MASSLM----GQKVVLSDRCCGESGMFAVKRPDIATQVKFRKQEEIEKNLKELPQG---E 412 Query: 1274 DVKILTSCPSCFQGLSRYNEDAGTTADYIVVEMARHLLGENWMPEYVERANNGGIERILV 1333 VK+LTSCP+C QGLSRY +D ADYIV+EMA+H+LGENW+ E+V++ANNGG+E++L+ Sbjct: 413 PVKMLTSCPACLQGLSRYTDDNNMPADYIVIEMAKHILGENWLDEFVKKANNGGVEKVLL 472 >Cj1213c [C] COG0277 FAD/FMN-containing dehydrogenases Cje Campylobacter jejuni Length = 460 Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 100/437 (22%), Positives = 177/437 (40%), Gaps = 76/437 (17%) Query: 156 LRKRATKVLGRFTAKDNIKFDGLSRVSHVTDATDWRVEYPFVVLTPDTEDEMAGLVKACI 215 ++K + RF ++N FD + + ++ DAT P VL P E+++A ++K C Sbjct: 1 MKKEFEQYFKRFLGEENAYFDEIHKRAYSYDATKKHY-LPDGVLFPRNEEDIARILKFCN 59 Query: 216 ELGLTIIPRGGGTGYTGGAIPLTPLSAVINTEKLEQLGAVEMEILPGLDKPYATIYSGAG 275 E + +IPRG G+G+TGGA+ + + + + ++ +++E L + +P G Sbjct: 60 ENNIIVIPRGSGSGFTGGALAVNGGVVLAFEKHMNKILEIDLENLVAVVQP--------G 111 Query: 276 VVTKRVSDAAEKAGFVFAVDPTSAEASCIGGNVAMNAGGKKAVLWGTALDNLASWRMVDP 335 V+ + K G + DP S E S +GGNV+ NAGG +A +G D + + R V P Sbjct: 112 VINIHLQKEVAKYGLFYPPDPASMEYSSLGGNVSENAGGMRAAKYGITKDYVMALRAVLP 171 Query: 336 QGDWLEVTRLDHNLGKIHDVEVARFKLEWSHPGEKGQKTEVFKTEILEISGKKFRKEGLG 395 G E+ R G++T Sbjct: 172 SG---EIIR-------------------------AGKRTI-------------------- 183 Query: 396 KDVTDKFLSGLPGVQKEGCDGLITSARWILHKMPKQTRTVCLEFFGQARDAIPSIVEIKD 455 KDV L+G+ + EG +++ L +PK +T F + A+ ++ Sbjct: 184 KDVAGYNLAGIL-IASEGSLAVLSELTLKLIPLPKFKKT-AFAIFPSVKSAMNAVY---- 237 Query: 456 YLDAETKKGGAILAGLEHLDERYLRAVGYATKSKRGVLPKMVLIGDIVGDDENAVAAAAS 515 ++ G +E LD +RAV + +LI D+ G+ V A Sbjct: 238 ----KSLASGVSPVSMEFLDNLSIRAVESKFNKGLPIEAGAILIADVDGN----VKEAID 289 Query: 516 EVIRMANNR-----VGEGFVAVSPEARKKFWLDRSRTAAIAKHTNAFKINEDVVIPLNRM 570 E +R + E +A + W R + K+NED+ +P +++ Sbjct: 290 EDLRNLEHYFLEAGASEFKIAKDEQETADIWFARRNCSQSIAMYGTLKLNEDITVPRSKL 349 Query: 571 GEYTDGIERINIELSIK 587 +GI+ I+ + K Sbjct: 350 PTLLEGIDEISKKYGFK 366 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 5/87 (5%) Query: 740 HAGDGNVHTNIPV-NSDHYEMLQDAHVAVARIMKLARSLNGVISGEHGIGITKLEFL--- 795 H GDGNVHTN+ V + + E ++ + AV I KL L G +SGEHGIG++K F+ Sbjct: 372 HTGDGNVHTNVMVPDKNDKEQVKKGYEAVEEIFKLTVKLGGTLSGEHGIGLSKAPFMNLA 431 Query: 796 -TEDEIGEFRAYKKRVDPEGRFNKGKL 821 +E E+ R KK DP N K+ Sbjct: 432 FSEAEMNLMRNIKKAFDPNNILNPFKM 458 >aq_1769 [C] COG0277 FAD/FMN-containing dehydrogenases Aae Aquifex aeolicus Length = 482 Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 111/419 (26%), Positives = 164/419 (39%), Gaps = 78/419 (18%) Query: 158 KRATKVLGRFTAKDNIKFDGLSRVSHVTDATDWRVE--YPFVVLTPDTEDEMAGLVKACI 215 ++ K LG KD+I + R + DAT ++ P V+ P+ ++++ LV+ C Sbjct: 29 EKLKKALGEKKVKDSI----VERKLYAYDATPIPIQRAIPSAVVFPENKEDVIKLVEVCY 84 Query: 216 ELGLTIIPRGGGTGYTGGAIPLTPLSAVINTEKLEQLGAVEMEILPGLDKPYATIYSGAG 275 E + I PRG G+G TGGA+P V++ EK+++ +D AT G Sbjct: 85 EEDIPIFPRGAGSGLTGGAVPTIEEGIVVSFEKMDKF---------TVDVDNATAVVQPG 135 Query: 276 VVTKRVSDAAEKAGFVFAVDPTSAEASCIGGNVAMNAGGKKAVLWGTALDNLASWRMVDP 335 V+T + + EK G + DP+S + S IGGNVA NAGG + + +G + + V Sbjct: 136 VITYQFQEYVEKLGLFYPPDPSSFKYSTIGGNVAENAGGPRCLKYGVTREYVLGLETVIK 195 Query: 336 QGDWLEVTRLDHNLGKIHDVEVARFKLEWSHPGEKGQKTEVFKTEILEISGKKFRKEGLG 395 G EV R +G+ K+ G Sbjct: 196 NG---EVIR----------------------------------------TGRPVLKDVAG 212 Query: 396 KDVTDKFLSGLPGVQKEGCDGLITSARWILHKMPKQTRTVCLEFFGQARDAIPSIVEIKD 455 D+T K L G EG GL T L PK R L F ++ +I Sbjct: 213 YDLT-KLLVG-----SEGTLGLFTEITLKLIPKPK-ARMTALALFDDLETVGKAVTKI-- 263 Query: 456 YLDAETKKGGAILAGLEHLDERYLRAVGYATKSKRGVLPKMV--LIGDIVGDDENAVAAA 513 G + LE +D +RAV K LP+ V L+ V V Sbjct: 264 ------LTSGVFPSALEFMDRDAIRAV---EDFKPVGLPRDVEALLLIEVDGHPLTVKEE 314 Query: 514 ASEVIRMANNRVGEGFVAVSPEARKKFWLDRSRTAAIAKHTNAFKINEDVVIPLNRMGE 572 EV ++ + VA S E +K W R + KINED+V P + E Sbjct: 315 IKEVGKILEELGAKVQVAQSEEEAQKLWSARKNLGPALGNLKTGKINEDIVFPRTYLHE 373 Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 6/90 (6%) Query: 740 HAGDGNVHTNIPVNSDHYEMLQDAHVAVARIMKLARSLNGVISGEHGIGITKLEFLTEDE 799 H GDGN+H N+ + + E + A AV + +LA + NG I+GEHG+G+TK +FL + + Sbjct: 394 HIGDGNLHVNLLYDKSNKEEEERAERAVDEVFELALNYNGSITGEHGVGLTKRKFL-KWQ 452 Query: 800 IGE-----FRAYKKRVDPEGRFNKGKLLNL 824 GE + KK DP+ FN GK+L L Sbjct: 453 FGETGYELLKGIKKLFDPKNLFNPGKVLEL 482 >AGc1189 [C] COG0277 FAD/FMN-containing dehydrogenases Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 483 Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 58/158 (36%), Positives = 80/158 (50%), Gaps = 12/158 (7%) Query: 188 TDWRVEY---PFVVLTPDTEDEMAGLVKACIELGLTIIPRGGGTGYTGGAIPLTPLSAVI 244 TD V Y P V P T +E+A +++ C G+ ++PRG GT +GGAIP Sbjct: 52 TDAFVSYRRLPLAVALPKTTEEVAAVMRYCHRYGIPVVPRGAGTSLSGGAIP-------- 103 Query: 245 NTEKLEQLGAVEMEILPGLDKPYATIYSGAGVVTKRVSDAAEKAGFVFAVDPTSAEASCI 304 E +G +M + LD T AGV +SDAA GF +A DP+S A I Sbjct: 104 -QEDAVVIGLSKMSAILDLDFYNRTARVQAGVTNLSISDAAGAEGFFYAPDPSSQLACTI 162 Query: 305 GGNVAMNAGGKKAVLWGTALDNLASWRMVDPQGDWLEV 342 GGN+ MN+GG + +G +NL +MV G LE+ Sbjct: 163 GGNIGMNSGGAHCLKYGVTTNNLLGVKMVLVDGTVLEL 200 >jhp0459 [C] COG0277 FAD/FMN-containing dehydrogenases jHp Helicobacter pylori J99 Length = 459 Score = 92.0 bits (227), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 99/390 (25%), Positives = 164/390 (42%), Gaps = 76/390 (19%) Query: 182 SHVTDATDWRVEYPFVVLTPDTEDEMAGLVKACIELGLTIIPRGGGTGYTGGAIPLTPLS 241 ++ DAT R P V+ P E E++ ++K C E L ++PRG G+G+TGGA+ ++ Sbjct: 28 AYCYDATKER-HLPSGVIFPKNEREISQILKYCNEHRLIVVPRGAGSGFTGGALSVSG-G 85 Query: 242 AVINTEK-LEQLGAVEMEILPGLDKPYATIYSGAGVVTKRVSDAAEKAGFVFAVDPTSAE 300 V++ EK L+++ ++ + L +P GV+ K + EK + DP S Sbjct: 86 LVLSVEKHLDKILEIDTKNLIARVEP--------GVINKHFQNEVEKLDLFYPPDPASEN 137 Query: 301 ASCIGGNVAMNAGGKKAVLWGTALDNLASWRMVDPQGDWLEVTRLDHNLGKIHDVEVARF 360 S +GGNVA NAGG +A +G D + + R+V G E+ R Sbjct: 138 QSTLGGNVAENAGGMRAAKYGITKDYVMALRVVLANG---EIIR---------------- 178 Query: 361 KLEWSHPGEKGQKTEVFKTEILEISGKKFRKEGLGKDVTDKFLSGLPGVQKEGCDGLITS 420 G+KT KDV ++GL + EGC G+I+ Sbjct: 179 ---------AGKKTI--------------------KDVAGFNIAGLM-IASEGCLGVISE 208 Query: 421 ARWILHKMPKQTRTVCLEFFGQARDAIPSIVEIKDYLDAETKKGGAILAGLEHLDERYLR 480 L P ++ + F DA+ ++ +T G +E LD ++ Sbjct: 209 ITLKLLAKPPLKQS-AMGVFNHIEDAMNAVY--------KTMSSGVTPVAMEFLDNLSIK 259 Query: 481 AVGYATKSKRGVLPK---MVLIGDIVGDDENAVAAAASEVIRMANNRVGEGF-VAVSPEA 536 AV + +G LPK +LI + G + +A +E+ + GF +A + + Sbjct: 260 AV--EERFSKG-LPKDAGAILITQVDGVVKEQIAWQLNEIEKHFKANGCVGFKIAQNEQE 316 Query: 537 RKKFWLDRSRTAAIAKHTNAFKINEDVVIP 566 + W R + K+NEDV +P Sbjct: 317 EQDLWFSRRNASQSISVYGKKKLNEDVTVP 346 Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 5/86 (5%) Query: 740 HAGDGNVHTNIPVNSDHYEMLQDAHVAVARIMKLARSLNGVISGEHGIGITKLEFL---- 795 H GDGNVH NI + D L+ H A+ I + A SL G +SGEHGIG++K +F+ Sbjct: 373 HTGDGNVHVNIML-EDPKRDLEKGHKAMEEIFQAAISLEGTLSGEHGIGLSKAKFMPLAF 431 Query: 796 TEDEIGEFRAYKKRVDPEGRFNKGKL 821 E+ FR KK +DP N K+ Sbjct: 432 NHSEMELFRNIKKALDPNNILNPFKM 457