BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0006.p (221 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2879 [G] COG0036 Pentose-5-phosphate-3-epimerase Rso Ralstoni... 353 1e-97 YPO0155 [G] COG0036 Pentose-5-phosphate-3-epimerase Ype Yersinia... 348 5e-96 NMB1244 [G] COG0036 Pentose-5-phosphate-3-epimerase Nme Neisseri... 347 1e-95 rpe [G] COG0036 Pentose-5-phosphate-3-epimerase Eco Escherichia ... 346 2e-95 Zrpe [G] COG0036 Pentose-5-phosphate-3-epimerase EcZ Escherichia... 346 2e-95 ECs4228 [G] COG0036 Pentose-5-phosphate-3-epimerase Ecs Escheric... 346 2e-95 HI0566 [G] COG0036 Pentose-5-phosphate-3-epimerase Hin Haemophil... 345 4e-95 STM3483 [G] COG0036 Pentose-5-phosphate-3-epimerase Sty Salmonel... 343 1e-94 PM1619 [G] COG0036 Pentose-5-phosphate-3-epimerase Pmu Pasteurel... 343 2e-94 NMA1413 [G] COG0036 Pentose-5-phosphate-3-epimerase NmA Neisseri... 332 3e-91 >RSc2879 [G] COG0036 Pentose-5-phosphate-3-epimerase Rso Ralstonia solanacearum Length = 242 Score = 353 bits (907), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 175/231 (75%), Positives = 196/231 (84%), Gaps = 13/231 (5%) Query: 4 YRIAPSILSADFARLGEEVRNVVAAGADFIHFDVMDNHYVPNLTIGPLVCEAIRPHVQ-- 61 +RIAPSILSADFARLGEEVR V+ GAD+IHFDVMDNHYVPNLT+GPLVCEAIRPH Q Sbjct: 10 FRIAPSILSADFARLGEEVRRVIEGGADWIHFDVMDNHYVPNLTVGPLVCEAIRPHAQRD 69 Query: 62 ---VPIDVHLMVKPVDRIIPDFAKAGANLITFHPEASEHIDRSLQLIRDNGCKAGLVFNP 118 VPIDVHLMV+PVDRIIPDFAKAGA+LITFHPEASEHIDRSL LIRD GCKAGLVFNP Sbjct: 70 GKPVPIDVHLMVRPVDRIIPDFAKAGADLITFHPEASEHIDRSLALIRDQGCKAGLVFNP 129 Query: 119 GTPLQYLDHVMDKLDMVLIMSVNPGFGGQSFIPEALKKIAEVRRRI----DESGRDILLE 174 TPL YLDHVMD+LDMVLIMSVNPGFGGQSFIPEAL K+ VR+++ D +GR ILLE Sbjct: 130 ATPLHYLDHVMDRLDMVLIMSVNPGFGGQSFIPEALTKLRAVRQKLDAYADRTGRRILLE 189 Query: 175 VDGGIKIENIAAAARAGADTFVAGSAIFGKPD----YKAVIDAMRAELAQV 221 +DGG+K +NIA ARAGADTFVAGSA+FGKPD Y+ + A+R+ L + Sbjct: 190 IDGGVKADNIAEIARAGADTFVAGSAVFGKPDADGGYRGTVGALRSALEGI 240 >YPO0155 [G] COG0036 Pentose-5-phosphate-3-epimerase Ype Yersinia pestis Length = 225 Score = 348 bits (893), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 166/220 (75%), Positives = 191/220 (86%), Gaps = 1/220 (0%) Query: 1 MPTYRIAPSILSADFARLGEEVRNVVAAGADFIHFDVMDNHYVPNLTIGPLVCEAIRPH- 59 M Y IAPSILSADFARLGE+ V+AAGAD +HFDVMDNHYVPNLTIGP+VC+A+R + Sbjct: 1 MKKYLIAPSILSADFARLGEDTAKVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRDYG 60 Query: 60 VQVPIDVHLMVKPVDRIIPDFAKAGANLITFHPEASEHIDRSLQLIRDNGCKAGLVFNPG 119 + PIDVHLMVKPVDRI+PDFAKAGA ITFHPEASEH+DR+LQLI+++GCKAGLVFNP Sbjct: 61 ITAPIDVHLMVKPVDRIVPDFAKAGATYITFHPEASEHVDRTLQLIKESGCKAGLVFNPA 120 Query: 120 TPLQYLDHVMDKLDMVLIMSVNPGFGGQSFIPEALKKIAEVRRRIDESGRDILLEVDGGI 179 TPL YLD+VMDKLD++L+MSVNPGFGGQSFIPE L K+ +VR+ ID+SG DI LEVDGG+ Sbjct: 121 TPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPETLNKLRQVRKLIDDSGYDIRLEVDGGV 180 Query: 180 KIENIAAAARAGADTFVAGSAIFGKPDYKAVIDAMRAELA 219 K+ENI A AGAD FVAGSAIF +PDY AVIDAMR ELA Sbjct: 181 KVENIRQIAAAGADMFVAGSAIFNQPDYAAVIDAMRNELA 220 >NMB1244 [G] COG0036 Pentose-5-phosphate-3-epimerase Nme Neisseria meningitidis MC58 Length = 242 Score = 347 bits (889), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 169/224 (75%), Positives = 192/224 (85%), Gaps = 4/224 (1%) Query: 1 MPTYRIAPSILSADFARLGEEVRNVVAAGADFIHFDVMDNHYVPNLTIGPLVCEAIRPHV 60 M TYRIAPSILSADFARLGEEV +V+AAGAD IHFDVMDNHYVPNLT GP+VC A++P+ Sbjct: 1 MTTYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYA 60 Query: 61 QVPIDVHLMVKPVDRIIPDFAKAGANLITFHPEASEHIDRSLQLIRDNGCKAGLVFNPGT 120 VPIDVHLMV+PVD +I FAKAGA++ITFHPEAS HIDRSL LIRD GC+AGLV NP T Sbjct: 61 SVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPAT 120 Query: 121 PLQYLDHVMDKLDMVLIMSVNPGFGGQSFIPEALKKIAEVRRRID----ESGRDILLEVD 176 P+ L++V+D+LDMVL+MSVNPGFGGQSFIP L+KI VR +D +SGR I +EVD Sbjct: 121 PVYLLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRRVRAMLDRYEAQSGRHIAIEVD 180 Query: 177 GGIKIENIAAAARAGADTFVAGSAIFGKPDYKAVIDAMRAELAQ 220 GGIK +NIAA ARAGADTFVAGSAIFGKPDYKAVIDAMRAEL + Sbjct: 181 GGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIDAMRAELEK 224 >rpe [G] COG0036 Pentose-5-phosphate-3-epimerase Eco Escherichia coli K12 Length = 225 Score = 346 bits (888), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 165/222 (74%), Positives = 192/222 (86%), Gaps = 1/222 (0%) Query: 1 MPTYRIAPSILSADFARLGEEVRNVVAAGADFIHFDVMDNHYVPNLTIGPLVCEAIRPH- 59 M Y IAPSILSADFARLGE+ +AAGAD +HFDVMDNHYVPNLTIGP+V +++R + Sbjct: 1 MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYG 60 Query: 60 VQVPIDVHLMVKPVDRIIPDFAKAGANLITFHPEASEHIDRSLQLIRDNGCKAGLVFNPG 119 + PIDVHLMVKPVDRI+PDFA AGA++ITFHPEASEH+DR+LQLI++NGCKAGLVFNP Sbjct: 61 ITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPA 120 Query: 120 TPLQYLDHVMDKLDMVLIMSVNPGFGGQSFIPEALKKIAEVRRRIDESGRDILLEVDGGI 179 TPL YLD+VMDKLD++L+MSVNPGFGGQSFIP+ L K+ EVRRRIDESG DI LEVDGG+ Sbjct: 121 TPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGV 180 Query: 180 KIENIAAAARAGADTFVAGSAIFGKPDYKAVIDAMRAELAQV 221 K+ NI A AGAD FVAGSAIF +PDYK VID MR+ELA+V Sbjct: 181 KVNNIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRSELAKV 222 >Zrpe [G] COG0036 Pentose-5-phosphate-3-epimerase EcZ Escherichia coli O157:H7 EDL933 Length = 225 Score = 346 bits (888), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 165/222 (74%), Positives = 192/222 (86%), Gaps = 1/222 (0%) Query: 1 MPTYRIAPSILSADFARLGEEVRNVVAAGADFIHFDVMDNHYVPNLTIGPLVCEAIRPH- 59 M Y IAPSILSADFARLGE+ +AAGAD +HFDVMDNHYVPNLTIGP+V +++R + Sbjct: 1 MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYG 60 Query: 60 VQVPIDVHLMVKPVDRIIPDFAKAGANLITFHPEASEHIDRSLQLIRDNGCKAGLVFNPG 119 + PIDVHLMVKPVDRI+PDFA AGA++ITFHPEASEH+DR+LQLI++NGCKAGLVFNP Sbjct: 61 ITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPA 120 Query: 120 TPLQYLDHVMDKLDMVLIMSVNPGFGGQSFIPEALKKIAEVRRRIDESGRDILLEVDGGI 179 TPL YLD+VMDKLD++L+MSVNPGFGGQSFIP+ L K+ EVRRRIDESG DI LEVDGG+ Sbjct: 121 TPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGV 180 Query: 180 KIENIAAAARAGADTFVAGSAIFGKPDYKAVIDAMRAELAQV 221 K+ NI A AGAD FVAGSAIF +PDYK VID MR+ELA+V Sbjct: 181 KVNNIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRSELAKV 222 >ECs4228 [G] COG0036 Pentose-5-phosphate-3-epimerase Ecs Escherichia coli O157:H7 Length = 225 Score = 346 bits (888), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 165/222 (74%), Positives = 192/222 (86%), Gaps = 1/222 (0%) Query: 1 MPTYRIAPSILSADFARLGEEVRNVVAAGADFIHFDVMDNHYVPNLTIGPLVCEAIRPH- 59 M Y IAPSILSADFARLGE+ +AAGAD +HFDVMDNHYVPNLTIGP+V +++R + Sbjct: 1 MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYG 60 Query: 60 VQVPIDVHLMVKPVDRIIPDFAKAGANLITFHPEASEHIDRSLQLIRDNGCKAGLVFNPG 119 + PIDVHLMVKPVDRI+PDFA AGA++ITFHPEASEH+DR+LQLI++NGCKAGLVFNP Sbjct: 61 ITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPA 120 Query: 120 TPLQYLDHVMDKLDMVLIMSVNPGFGGQSFIPEALKKIAEVRRRIDESGRDILLEVDGGI 179 TPL YLD+VMDKLD++L+MSVNPGFGGQSFIP+ L K+ EVRRRIDESG DI LEVDGG+ Sbjct: 121 TPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGV 180 Query: 180 KIENIAAAARAGADTFVAGSAIFGKPDYKAVIDAMRAELAQV 221 K+ NI A AGAD FVAGSAIF +PDYK VID MR+ELA+V Sbjct: 181 KVNNIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRSELAKV 222 >HI0566 [G] COG0036 Pentose-5-phosphate-3-epimerase Hin Haemophilus influenzae Length = 234 Score = 345 bits (885), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 167/222 (75%), Positives = 190/222 (85%), Gaps = 1/222 (0%) Query: 1 MPTYRIAPSILSADFARLGEEVRNVVAAGADFIHFDVMDNHYVPNLTIGPLVCEAIRPH- 59 M Y IAPSILSAD ARLG++V+NV+ AGAD IHFDVMDNHYVPNLT GP VC+A+R + Sbjct: 11 MKPYLIAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDYG 70 Query: 60 VQVPIDVHLMVKPVDRIIPDFAKAGANLITFHPEASEHIDRSLQLIRDNGCKAGLVFNPG 119 + PIDVHLMVKPVDRIIPDFAKAGAN ITFHPE+SEHIDRSLQLIRD GCK+GLVFNP Sbjct: 71 ITAPIDVHLMVKPVDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNPA 130 Query: 120 TPLQYLDHVMDKLDMVLIMSVNPGFGGQSFIPEALKKIAEVRRRIDESGRDILLEVDGGI 179 PL YLD+V+DK+D+VL+MSVNPGFGGQSFIP LKK+ + R+ IDESG DI LEVDGG+ Sbjct: 131 MPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGGV 190 Query: 180 KIENIAAAARAGADTFVAGSAIFGKPDYKAVIDAMRAELAQV 221 K++NIA A AGAD FVAGSAIFGKPDYK VID +R +LA V Sbjct: 191 KVDNIAEIAAAGADMFVAGSAIFGKPDYKQVIDQIRTQLASV 232 >STM3483 [G] COG0036 Pentose-5-phosphate-3-epimerase Sty Salmonella typhimurium LT2 Length = 225 Score = 343 bits (881), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 164/222 (73%), Positives = 191/222 (86%), Gaps = 1/222 (0%) Query: 1 MPTYRIAPSILSADFARLGEEVRNVVAAGADFIHFDVMDNHYVPNLTIGPLVCEAIRPH- 59 M Y IAPSILSADFARLGE+ +AAGAD +HFDVMDNHYVPNLTIGP+V +++R + Sbjct: 1 MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRQYG 60 Query: 60 VQVPIDVHLMVKPVDRIIPDFAKAGANLITFHPEASEHIDRSLQLIRDNGCKAGLVFNPG 119 + PIDVHLMVKPVDRI+PDFA AGA++ITFHPEASEH+DR+LQLI+++GCKAGLVFNP Sbjct: 61 ITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKEHGCKAGLVFNPA 120 Query: 120 TPLQYLDHVMDKLDMVLIMSVNPGFGGQSFIPEALKKIAEVRRRIDESGRDILLEVDGGI 179 TPL YLD+VMDKLD++L+MSVNPGFGGQSFIP+ L K+ EVRRRID SG DI LEVDGG+ Sbjct: 121 TPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDASGYDIRLEVDGGV 180 Query: 180 KIENIAAAARAGADTFVAGSAIFGKPDYKAVIDAMRAELAQV 221 K+ NI A AGAD FVAGSAIF KPDYK VID MR+ELA+V Sbjct: 181 KVNNIGEIAAAGADMFVAGSAIFDKPDYKKVIDEMRSELAKV 222 >PM1619 [G] COG0036 Pentose-5-phosphate-3-epimerase Pmu Pasteurella multocida Length = 238 Score = 343 bits (880), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 165/222 (74%), Positives = 187/222 (84%), Gaps = 1/222 (0%) Query: 1 MPTYRIAPSILSADFARLGEEVRNVVAAGADFIHFDVMDNHYVPNLTIGPLVCEAIRPH- 59 M Y IAPSILSAD ARLGE+V V+ GAD IHFDVMDNHYVPNLT GP +C+A+R + Sbjct: 16 MKPYLIAPSILSADLARLGEDVEQVLTCGADVIHFDVMDNHYVPNLTFGPAICQALRHYG 75 Query: 60 VQVPIDVHLMVKPVDRIIPDFAKAGANLITFHPEASEHIDRSLQLIRDNGCKAGLVFNPG 119 + PIDVHLMVKPVDR+IPDFAKAGAN ITFHPEA+EHIDRSLQLIRD GCK+GLVFNP Sbjct: 76 ITAPIDVHLMVKPVDRLIPDFAKAGANYITFHPEATEHIDRSLQLIRDCGCKSGLVFNPA 135 Query: 120 TPLQYLDHVMDKLDMVLIMSVNPGFGGQSFIPEALKKIAEVRRRIDESGRDILLEVDGGI 179 TPL YLD+VMDK+D++L+MSVNPGFGGQSFIP L K+ E R+RIDESG DI LEVDGG+ Sbjct: 136 TPLSYLDYVMDKVDVILLMSVNPGFGGQSFIPSTLDKLREARQRIDESGFDIRLEVDGGV 195 Query: 180 KIENIAAAARAGADTFVAGSAIFGKPDYKAVIDAMRAELAQV 221 K+ NIA ARAGAD FVAGSAIF +PDY+ VID MR +LA V Sbjct: 196 KVSNIADIARAGADMFVAGSAIFDQPDYQKVIDEMRQQLATV 237 >NMA1413 [G] COG0036 Pentose-5-phosphate-3-epimerase NmA Neisseria meningitidis Z2491 Length = 242 Score = 332 bits (852), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 169/224 (75%), Positives = 194/224 (86%), Gaps = 4/224 (1%) Query: 1 MPTYRIAPSILSADFARLGEEVRNVVAAGADFIHFDVMDNHYVPNLTIGPLVCEAIRPHV 60 M TYRIAPSILSADFARLGEEV +V+AAGAD IHFDVMDNHYVPNLT GP+VC A++P+ Sbjct: 1 MTTYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYA 60 Query: 61 QVPIDVHLMVKPVDRIIPDFAKAGANLITFHPEASEHIDRSLQLIRDNGCKAGLVFNPGT 120 VPIDVHLMV+PVD +I FAKAGA++ITFHPEAS HIDRSL LIRD GC+AGLV NP T Sbjct: 61 SVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPAT 120 Query: 121 PLQYLDHVMDKLDMVLIMSVNPGFGGQSFIPEALKKIAEVRRRID----ESGRDILLEVD 176 P+ L++V+D+LDMVL+MSVNPGFGGQSFIP L+KI +VR +D +SGR I +EVD Sbjct: 121 PVYLLENVLDRLDMVLLMSVNPGFGGQSFIPYTLEKIRQVRAMLDRYEEKSGRRIAIEVD 180 Query: 177 GGIKIENIAAAARAGADTFVAGSAIFGKPDYKAVIDAMRAELAQ 220 GGIK +NIAAAA+AGADTFVAGSAIFGKPDYKAVIDAMRAEL + Sbjct: 181 GGIKTDNIAAAAQAGADTFVAGSAIFGKPDYKAVIDAMRAELEK 224