BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0075.p (109 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll2486 [K] COG1695 Predicted transcriptional regulators Mlo Mes... 125 3e-29 CC3408 Non COG 120 1e-27 CAC0571 [K] COG1695 Predicted transcriptional regulators Cac Clo... 108 2e-24 lin0608 [K] COG1695 Predicted transcriptional regulators Lin Lis... 96 2e-20 BH0406 [K] COG1695 Predicted transcriptional regulators Bha Baci... 88 5e-18 SA2484 [K] COG1695 Predicted transcriptional regulators Sau Stap... 77 7e-15 SP0100 [K] COG1695 Predicted transcriptional regulators Spn Stre... 74 6e-14 CAP0153 [K] COG1695 Predicted transcriptional regulators Cac Clo... 73 1e-13 SPy2172 [K] COG1695 Predicted transcriptional regulators Spy Str... 72 2e-13 L128255 [K] COG1695 Predicted transcriptional regulators Lla Lac... 72 3e-13 >mll2486 [K] COG1695 Predicted transcriptional regulators Mlo Mesorhizobium loti Length = 108 Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 58/104 (55%), Positives = 76/104 (73%) Query: 1 MADHIPSQLKKGVLELCVLALLAQGDSYAYDLARNLAQAVDMGEGTIYPLMRRLQTDGLV 60 M D I QL+KG L+LCVLA+L++G+SY Y++A L AV+MGEGTIYPLMRR+Q DGLV Sbjct: 1 MTDSILVQLRKGALDLCVLAVLSRGESYGYEIASTLVAAVNMGEGTIYPLMRRMQNDGLV 60 Query: 61 DSYQQESESGPSRKYYRLTEAGLLSLTAQKQDWQRFTASVNSIL 104 + ES SGP RKYYRLT G + A ++DW+ F +V+ +L Sbjct: 61 ATRLVESSSGPPRKYYRLTPLGQQAFEAHRRDWRSFAGAVDRLL 104 >CC3408 Non COG Length = 108 Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 66/105 (62%), Positives = 81/105 (77%) Query: 1 MADHIPSQLKKGVLELCVLALLAQGDSYAYDLARNLAQAVDMGEGTIYPLMRRLQTDGLV 60 M + I QLKKGVL LCVLALL+ DSYAY++A L + +DMGEGTIYPLMRR+Q+DGLV Sbjct: 1 MPETIEIQLKKGVLALCVLALLSHADSYAYEIASRLTRDIDMGEGTIYPLMRRMQSDGLV 60 Query: 61 DSYQQESESGPSRKYYRLTEAGLLSLTAQKQDWQRFTASVNSILG 105 ++Y ES+SGP RKYYRLT AG SL QK +W F +VN+I+G Sbjct: 61 ETYLVESQSGPPRKYYRLTAAGRESLAQQKAEWTAFATAVNNIVG 105 >CAC0571 [K] COG1695 Predicted transcriptional regulators Cac Clostridium acetobutylicum Length = 107 Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 48/98 (48%), Positives = 67/98 (68%) Query: 7 SQLKKGVLELCVLALLAQGDSYAYDLARNLAQAVDMGEGTIYPLMRRLQTDGLVDSYQQE 66 +QLKKG+LELCVL++L + D Y Y+L +++++++ EGTIYPL+RRL +G +Y QE Sbjct: 3 TQLKKGILELCVLSILDRKDCYGYELVDEISKSIEISEGTIYPLLRRLSKEGFFTTYLQE 62 Query: 67 SESGPSRKYYRLTEAGLLSLTAQKQDWQRFTASVNSIL 104 S GP RKYY+LTE G ++W F VNSIL Sbjct: 63 STEGPPRKYYKLTELGREEKQKLVEEWMEFVEGVNSIL 100 >lin0608 [K] COG1695 Predicted transcriptional regulators Lin Listeria innocua Length = 110 Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 44/101 (43%), Positives = 62/101 (61%) Query: 4 HIPSQLKKGVLELCVLALLAQGDSYAYDLARNLAQAVDMGEGTIYPLMRRLQTDGLVDSY 63 + Q KKGVLELC L L+ + D Y Y+LA +++ +++ EG IYP++RRL + +Y Sbjct: 2 EVNPQFKKGVLELCCLFLIQKKDCYGYELANQVSKYIEVAEGAIYPVLRRLVKEEYCSTY 61 Query: 64 QQESESGPSRKYYRLTEAGLLSLTAQKQDWQRFTASVNSIL 104 ES GPSRKYY+LT G + L +W FT SV +L Sbjct: 62 LVESNEGPSRKYYQLTVKGEIYLNELISEWNNFTDSVAKLL 102 >BH0406 [K] COG1695 Predicted transcriptional regulators Bha Bacillus halodurans Length = 174 Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 42/101 (41%), Positives = 68/101 (67%), Gaps = 1/101 (0%) Query: 5 IPSQLKKGVLELCVLALLAQGDSYAYDLARNLAQ-AVDMGEGTIYPLMRRLQTDGLVDSY 63 I SQL KG+LE C+LA++ + Y Y+LA L + +++ EG+IYP++ RLQ + L+ Sbjct: 68 IRSQLLKGILEGCILAVIRRQSVYGYELAVKLQEHGLEVSEGSIYPILLRLQKEKLIKGT 127 Query: 64 QQESESGPSRKYYRLTEAGLLSLTAQKQDWQRFTASVNSIL 104 ++S +GP+RKYY LTE G+ +L KQ+W++ V+ +L Sbjct: 128 MKKSPTGPNRKYYVLTEDGMAALEQFKQNWEQLKTPVDGLL 168 >SA2484 [K] COG1695 Predicted transcriptional regulators Sau Staphylococcus aureus N315 Length = 112 Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 62/104 (59%), Gaps = 3/104 (2%) Query: 5 IPSQLKKGVLELCVLALLAQGDSYAYDLARNLA--QAVDMGEGTIYPLMRRLQTDGLVDS 62 + Q+ KG+L+ +L L+AQG++Y Y++ L + ++ EG+IYP++ RL G VD+ Sbjct: 3 VSDQIMKGLLDGAILGLIAQGETYGYEIMTKLKNQEFPEISEGSIYPVLMRLNKKGYVDT 62 Query: 63 -YQQESESGPSRKYYRLTEAGLLSLTAQKQDWQRFTASVNSILG 105 ++ S GP RKYY +T++GL L K WQ + ++ G Sbjct: 63 TIKKSSNGGPRRKYYTITDSGLKELKVFKSKWQALNKGMINLFG 106 >SP0100 [K] COG1695 Predicted transcriptional regulators Spn Streptococcus pneumoniae TIGR4 Length = 108 Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 59/92 (64%), Gaps = 1/92 (1%) Query: 13 VLELCVLALLAQGDSYAYDLARNLAQAVDMGEGTIYPLMRRLQTDGLVDSYQQESESGPS 72 ++E +LA+L QGDSY Y++++ + ++ E T+YP++++L+ + + +Y +E + G Sbjct: 9 LIEFLILAVLEQGDSYGYEISQTIKLIANIKESTLYPILKKLEGNSFLTTYSREFQ-GRM 67 Query: 73 RKYYRLTEAGLLSLTAQKQDWQRFTASVNSIL 104 RKYY LT G+ L K +W +T ++N I+ Sbjct: 68 RKYYSLTNGGIEQLLTLKDEWALYTDTINGII 99 >CAP0153 [K] COG1695 Predicted transcriptional regulators Cac Clostridium acetobutylicum Length = 115 Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 3/101 (2%) Query: 7 SQLKKGVLELCVLALLAQ-GDSYAYDLARNLAQ--AVDMGEGTIYPLMRRLQTDGLVDSY 63 SQ KG LE C+L ++ G+ Y Y++A L ++ EGTIYPL+ RL+ L++S Sbjct: 5 SQFLKGTLEGCILKIINDAGEVYGYEIAEKLKDYGLNNVSEGTIYPLLLRLEKSELLNSI 64 Query: 64 QQESESGPSRKYYRLTEAGLLSLTAQKQDWQRFTASVNSIL 104 ++ES GP RKYY L+ G L ++W AS++ I Sbjct: 65 KKESPYGPKRKYYTLSSKGKEELKDFYENWLNLKASIDKIF 105 >SPy2172 [K] COG1695 Predicted transcriptional regulators Spy Streptococcus pyogenes M1 GAS Length = 108 Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 59/92 (64%), Gaps = 1/92 (1%) Query: 13 VLELCVLALLAQGDSYAYDLARNLAQAVDMGEGTIYPLMRRLQTDGLVDSYQQESESGPS 72 ++E +LA++ + DSY YD+++ + ++ E T+YP++++L+ G + +Y QE + G Sbjct: 9 LIEFLILAIVEKNDSYGYDISQTIKLVANIKESTLYPILKKLEKAGFLTTYSQEHQ-GRK 67 Query: 73 RKYYRLTEAGLLSLTAQKQDWQRFTASVNSIL 104 RKYY +T +G L K++WQ + +++ I+ Sbjct: 68 RKYYAVTSSGRAQLIFLKKEWQSYKFALDGII 99 >L128255 [K] COG1695 Predicted transcriptional regulators Lla Lactococcus lactis Length = 120 Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 34/89 (38%), Positives = 57/89 (64%), Gaps = 2/89 (2%) Query: 7 SQLKKGVLELCVLALLAQGDSYAYDLARNLAQ--AVDMGEGTIYPLMRRLQTDGLVDSYQ 64 +++ KGVLE CVL ++ QG++Y Y++ + L + D+ EGT+Y + RL+ G V+ + Sbjct: 5 TEMLKGVLEGCVLEIIGQGETYGYEITQKLRELGFEDVVEGTVYTITMRLEKKGYVEIRK 64 Query: 65 QESESGPSRKYYRLTEAGLLSLTAQKQDW 93 + S+ GP+RK+YRL EAG + + W Sbjct: 65 KPSKLGPARKWYRLNEAGQIERGNFWKKW 93