BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0045.p (481 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA3702 [T] COG3706 Response regulator containing a CheY-like rec... 170 7e-42 sll1673_3 [T] COG2199 FOG Syn Synechocystis 167 7e-41 RSp1524_2 [T] COG2199 FOG Rso Ralstonia solanacearum 157 6e-38 slr1760 [T] COG3706 Response regulator containing a CheY-like re... 157 7e-38 alr3599 [T] COG3706 Response regulator containing a CheY-like re... 153 8e-37 sll0779_2 [T] COG2199 FOG Syn Synechocystis 153 1e-36 slr0829_3 [T] COG2199 FOG Syn Synechocystis 152 1e-36 mll9509 [T] COG3706 Response regulator containing a CheY-like re... 151 3e-36 RSp0400_2 [T] COG2199 FOG Rso Ralstonia solanacearum 150 6e-36 slr0687_3 [T] COG2199 FOG Syn Synechocystis 150 6e-36 >PA3702 [T] COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain Pae Pseudomonas aeruginosa Length = 347 Score = 170 bits (431), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 111/255 (43%), Positives = 153/255 (60%), Gaps = 14/255 (5%) Query: 233 LVVTLAREEALADWKQQTFVYGAA---VLLLLAIIGVFGWRLIGQIELRLRAEDRALQAM 289 ++V +EE K F GA V L AI V R + + L+ D A +A+ Sbjct: 96 IIVLSTKEEPTV--KSAAFAAGANDYLVKLPDAIELVARIRYHSRSYIALQQRDEAYRAL 153 Query: 290 GELQM----ANHRLEMLAHQDGLTGLANRRHLDTMLETEFKRAERSGAALALIMIDVDFF 345 E Q N L+ L + DGLTGL+NRRH D LE E++R+ R + L+L+MIDVD+F Sbjct: 154 RESQQQLLETNLVLQRLMNSDGLTGLSNRRHFDEYLEMEWRRSLREQSQLSLLMIDVDYF 213 Query: 346 KQYNDLYGHQAGDECLRRVAGVLKERQRRPGDLAARYGGEEMAMLLPCTDAEGACAVAEK 405 K YND +GH AGDE LR+VAG ++E R DLAARYGGEE AM+LP T GA +AEK Sbjct: 214 KSYNDTFGHVAGDEALRQVAGAIREGCSRSSDLAARYGGEEFAMVLPGTSPGGARLLAEK 273 Query: 406 LRAGIQALELPH-RGNPVGVVTVSVGVCALELLP-SAARSVQALLGAADAALYEAKHEGR 463 +R +++L++ H + P +TVS+GV L+P ++ + L+ AD ALY+AK+ GR Sbjct: 274 VRRTVESLQISHDQPRPGSHLTVSIGVST--LVPGGGGQTFRVLIEMADQALYQAKNNGR 331 Query: 464 NQVRL-AAPMKTAPS 477 NQV L P+ AP+ Sbjct: 332 NQVGLMEQPVPPAPA 346 >sll1673_3 [T] COG2199 FOG Syn Synechocystis Length = 176 Score = 167 bits (422), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 82/175 (46%), Positives = 119/175 (68%), Gaps = 3/175 (1%) Query: 292 LQMANHRLEMLAHQDGLTGLANRRHLDTMLETEFKRAERSGAALALIMIDVDFFKQYNDL 351 LQ AN +L++LA+ DGLT +ANRR D L E++R R L+LI++D+D+FK YNDL Sbjct: 1 LQAANQQLQLLANIDGLTHIANRRRFDEYLAQEWQRHCREQKPLSLILVDIDYFKAYNDL 60 Query: 352 YGHQAGDECLRRVAGVLKERQRRPGDLAARYGGEEMAMLLPCTDAEGACAVAEKLRAGIQ 411 YGHQ GD+CL++VA L + +R DL ARYGGEE ++LP T+ + A A+AE + I Sbjct: 61 YGHQKGDDCLQKVANTLVDIAKRITDLVARYGGEEFVIVLPNTNRQDALAMAENMLQAIA 120 Query: 412 ALELPHRGNPVG-VVTVSVGVCALELLPSAARSVQALLGAADAALYEAKHEGRNQ 465 AL +PH G+ V VT+S+GV + ++P +++ ++ AD ALY AK +GRN+ Sbjct: 121 ALAIPHEGSSVSKYVTISIGVSS--IIPMPEDTIERIISEADQALYSAKSQGRNR 173 >RSp1524_2 [T] COG2199 FOG Rso Ralstonia solanacearum Length = 190 Score = 157 bits (396), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 90/172 (52%), Positives = 107/172 (62%) Query: 295 ANHRLEMLAHQDGLTGLANRRHLDTMLETEFKRAERSGAALALIMIDVDFFKQYNDLYGH 354 A +L LA+ DGLTGL RR LD LE E++RA R G LA++MIDVD FK YND YGH Sbjct: 7 AEQKLAWLANTDGLTGLGTRRALDAALEAEWQRANRQGRPLAVLMIDVDEFKHYNDRYGH 66 Query: 355 QAGDECLRRVAGVLKERQRRPGDLAARYGGEEMAMLLPCTDAEGACAVAEKLRAGIQALE 414 AGD LR VA + + RRPGD A RYGGEE +LLP TD GA VAE +RA + A Sbjct: 67 AAGDTVLRTVARCVNDSIRRPGDFAGRYGGEEFCVLLPDTDLAGAQRVAEIIRATVLAAG 126 Query: 415 LPHRGNPVGVVTVSVGVCALELLPSAARSVQALLGAADAALYEAKHEGRNQV 466 P+ G+ G +TVS+GV A + + LL AD LYEAK GRN V Sbjct: 127 EPNAGSAHGRLTVSIGVAAHDGRGDTGTTPARLLHHADLQLYEAKSGGRNAV 178 >slr1760 [T] COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain Syn Synechocystis Length = 315 Score = 157 bits (396), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 100/238 (42%), Positives = 140/238 (58%), Gaps = 13/238 (5%) Query: 230 PLVLVVTLAREEALADWKQQTFVYGAAVLLLLAIIGVFGWRLIGQIELRLRAEDRALQAM 289 PLVL++T +EA D + F GA + + W ++ Q RL ++R LQ Sbjct: 86 PLVLMITGLDDEASVD---RAFEAGA----IDYVTKPIHWAVLRQRVKRLLYQNR-LQ-- 135 Query: 290 GELQMANHRLEMLAHQDGLTGLANRRHLDTMLETEFKRAERSGAALALIMIDVDFFKQYN 349 +L+ N LE LA D LT LANRR L+ L+TE+ A R ++++ D+D+FK YN Sbjct: 136 HQLESVNQMLERLAKVDQLTQLANRRQLELFLDTEWSEAIREQYPFSILLCDIDYFKNYN 195 Query: 350 DLYGHQAGDECLRRVAGVLKERQRRPGDLAARYGGEEMAMLLPCTDAEGACAVAEKLRAG 409 D YGHQ GD+CL++VA L RP DLAARYGGEE ++LP TD +GA + E ++A Sbjct: 196 DHYGHQGGDDCLQQVAKALTRVVHRPKDLAARYGGEEFLIVLPNTDLQGAIHIGEDIQAE 255 Query: 410 IQALELPHRGNPVG-VVTVSVGVCALELLPSAARSVQALLGAADAALYEAKHEGRNQV 466 I L +PH + + VT+S+G CA +P L+GAAD LYEAK +GRN++ Sbjct: 256 ITRLAIPHVQSAIADHVTLSIG-CA-STIPRLGSDWGKLVGAADQYLYEAKAQGRNRL 311 >alr3599 [T] COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain Nos Nostoc sp. PCC 7120 Length = 344 Score = 153 bits (387), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 79/177 (44%), Positives = 115/177 (64%), Gaps = 3/177 (1%) Query: 291 ELQMANHRLEMLAHQDGLTGLANRRHLDTMLETEFKRAERSGAALALIMIDVDFFKQYND 350 +L+ AN L+ LA+ DGLTGLANRR D L T++ + GA L+LI+ D+D+FK YND Sbjct: 163 QLEAANMALQHLANVDGLTGLANRRRFDNYLNTQWINLVQEGAPLSLILCDIDYFKFYND 222 Query: 351 LYGHQAGDECLRRVAGVLKERQRRPGDLAARYGGEEMAMLLPCTDAEGACAVAEKLRAGI 410 YGH GD CL++V VL + ++ DL ARYGGEE A+++P T A+GA VA ++ + Sbjct: 223 QYGHPTGDICLQKVGAVLSYKAQKHQDLVARYGGEEFAVVMPYTHAKGAIYVAHAIQTSV 282 Query: 411 QALELPHRGNPVGV-VTVSVGVCALELLPSAARSVQALLGAADAALYEAKHEGRNQV 466 + L++ H + V +T+S+GV + P+ S L+ AAD ALY+AK GRN++ Sbjct: 283 RDLQIAHDKSAVSQHITLSMGVATIT--PTWESSPSDLIAAADKALYKAKESGRNRI 337 >sll0779_2 [T] COG2199 FOG Syn Synechocystis Length = 184 Score = 153 bits (386), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 82/181 (45%), Positives = 112/181 (61%), Gaps = 5/181 (2%) Query: 299 LEMLAHQDGLTGLANRRHLDTMLETEFKRAERSGAALALIMIDVDFFKQYNDLYGHQAGD 358 LE L DGLTG+ NRR D LE E++ A R +L L+M+D+D+FK YND GHQAGD Sbjct: 2 LERLTQIDGLTGVYNRRFFDQALEREWQIAFRETESLTLVMLDIDYFKLYNDTLGHQAGD 61 Query: 359 ECLRRVAGVLKERQRRPGDLAARYGGEEMAMLLPCTDAEGACAVAEKLRAGIQALELPHR 418 CLR VA +L+E R DL ARYGGEE A++LP TD GA VA++++ + A + H Sbjct: 62 HCLRIVAAILQESVHRTSDLVARYGGEEFALILPRTDLSGAVIVAQRIKTLMDAKAISHP 121 Query: 419 GNPVG-VVTVSVGV-CALELLPSAARSVQALLGAADAALYEAKHEGRNQVRLAAPMKTAP 476 + + VTVS+G+ CA +P S+ + + AD ALY+AK GRN + T+P Sbjct: 122 TSEIANYVTVSIGIHCA---VPRPGLSLASWVKCADDALYQAKKRGRNGYFVLEDTSTSP 178 Query: 477 S 477 + Sbjct: 179 T 179 >slr0829_3 [T] COG2199 FOG Syn Synechocystis Length = 188 Score = 152 bits (385), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 80/175 (45%), Positives = 107/175 (61%), Gaps = 3/175 (1%) Query: 292 LQMANHRLEMLAHQDGLTGLANRRHLDTMLETEFKRAERSGAALALIMIDVDFFKQYNDL 351 L+ N +L L DGLT +ANRR + ++ E++R R+ ++LIM D+D FK YND Sbjct: 1 LERFNKKLSQLIDIDGLTKIANRRCFNVRIKQEWRRLSRAQVPISLIMFDIDCFKNYNDR 60 Query: 352 YGHQAGDECLRRVAGVLKERQRRPGDLAARYGGEEMAMLLPCTDAEGACAVAEKLRAGIQ 411 YGH GD CL RVA ++ RP DL AR+GGEE A+LLP TD +GA VAEK+ I Sbjct: 61 YGHPEGDLCLIRVAQAARKAASRPADLVARFGGEEFAVLLPETDTKGAIMVAEKIIQAIS 120 Query: 412 ALELPHRGNPV-GVVTVSVGVCALELLPSAARSVQALLGAADAALYEAKHEGRNQ 465 L + H +P+ G +T+S+G+ PS + L+ AD ALYEAK GRNQ Sbjct: 121 QLAIAHEASPISGQITISLGIGT--QFPSKELISRTLIKQADMALYEAKRRGRNQ 173 >mll9509 [T] COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain Mlo Mesorhizobium loti Length = 354 Score = 151 bits (382), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 94/208 (45%), Positives = 124/208 (59%), Gaps = 15/208 (7%) Query: 271 LIGQIELRLRA------EDRALQAMGELQ----MANHRLEMLAHQDGLTGLANRRHLDTM 320 LI +I RA D A +A+ E Q AN LE L DGLTGL NRR+ D Sbjct: 147 LIARIRYHTRAYLDHVQRDAAYRALRESQRQLISANLELERLTRIDGLTGLGNRRYFDEY 206 Query: 321 LETEFKRAERSGAALALIMIDVDFFKQYNDLYGHQAGDECLRRVAGVLKERQRRPGDLAA 380 L E+KRA R+ + L+L+MID D FK+YND YGH AGDE L+++A V+ R DLAA Sbjct: 207 LAAEWKRAFRAQSPLSLLMIDADNFKRYNDTYGHMAGDEVLKQIARVIHSGSGRSTDLAA 266 Query: 381 RYGGEEMAMLLPCTDAEGACAVAEKLRAGIQALELPHRGNPVGVVTVSVGVCALELLPSA 440 RYGGEE ++L T E + A+AE+L G++ L +PH + VT+SVGV +P+ Sbjct: 267 RYGGEEFVIVLVDTLLEESSAIAEQLVQGVRELNIPHGPD---RVTISVGVAT--TVPNE 321 Query: 441 ARSVQALLGAADAALYEAKHEGRNQVRL 468 + + AAD AL+ AK EGRN+V L Sbjct: 322 NETPNDFVNAADLALFRAKSEGRNRVAL 349 >RSp0400_2 [T] COG2199 FOG Rso Ralstonia solanacearum Length = 206 Score = 150 bits (379), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 84/172 (48%), Positives = 106/172 (61%), Gaps = 1/172 (0%) Query: 295 ANHRLEMLAHQDGLTGLANRRHLDTMLETEFKRAERSGAALALIMIDVDFFKQYNDLYGH 354 A R LA D LTGL NRR LD L+ E+KRA R ++++MIDVD FK YND YGH Sbjct: 10 AGRRHAELAITDALTGLPNRRALDAFLDKEWKRALRERWPVSVLMIDVDAFKPYNDHYGH 69 Query: 355 QAGDECLRRVAGVLKERQRRPGDLAARYGGEEMAMLLPCTDAEGACAVAEKLRAGIQALE 414 GD L+ VA ++ R GDLAARYGGEE ++LP TD EGA AVAE +R + AL Sbjct: 70 LGGDTALKAVARCIQAHASRSGDLAARYGGEEFCIVLPHTDLEGAIAVAEHIRQAVLALH 129 Query: 415 LPHRGNPVGVVTVSVGVCALELLPSAARSVQALLGAADAALYEAKHEGRNQV 466 +PH P G+++VS+G S R+ + L AAD LY AK +GRN+ Sbjct: 130 IPHAQGPAGILSVSIGAATDTPALSGDRA-ETLTQAADTQLYRAKTQGRNRT 180 >slr0687_3 [T] COG2199 FOG Syn Synechocystis Length = 176 Score = 150 bits (379), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 75/168 (44%), Positives = 112/168 (66%), Gaps = 3/168 (1%) Query: 298 RLEMLAHQDGLTGLANRRHLDTMLETEFKRAERSGAALALIMIDVDFFKQYNDLYGHQAG 357 ++ LA+ DGLTG+ANRR+LD LE ++++ + L+LI+ D+DFFKQYND YGH G Sbjct: 4 QVHYLANMDGLTGIANRRYLDHFLEQQWQKLAKHHQYLSLILCDIDFFKQYNDTYGHLEG 63 Query: 358 DECLRRVAGVLKERQRRPGDLAARYGGEEMAMLLPCTDAEGACAVAEKLRAGIQALELPH 417 DECL++VA +LK+ RR DL ARYGGEE A++LP T+ +G V L++ + ++PH Sbjct: 64 DECLKKVANLLKKVMRRGTDLTARYGGEEFALVLPQTNKQGCQNVVIHLQSVFKQAQIPH 123 Query: 418 RGNPVG-VVTVSVGVCALELLPSAARSVQALLGAADAALYEAKHEGRN 464 R + + +T+S+G + LP+ + L+ AD AL++AK GRN Sbjct: 124 RSSIIQPYLTLSIGSATMVPLPNVPP--KQLIDWADQALFKAKKAGRN 169