BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0353.p (220 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2351 [P] COG2011 ABC-type metal ion transport system, permease... 237 1e-62 mll4791 [P] COG2011 ABC-type metal ion transport system, permeas... 222 5e-58 BMEII0336 [P] COG2011 ABC-type metal ion transport system, perme... 213 3e-55 RSc0921 [P] COG2011 ABC-type metal ion transport system, permeas... 202 6e-52 VC0906 [P] COG2011 ABC-type metal ion transport system, permease... 188 7e-48 FN0659 [P] COG2011 ABC-type metal ion transport system, permease... 181 1e-45 SMc03158 [P] COG2011 ABC-type metal ion transport system, permea... 167 2e-41 YPO1319 [P] COG2011 ABC-type metal ion transport system, permeas... 166 3e-41 AGl763 [P] COG2011 ABC-type metal ion transport system, permease... 165 6e-41 BH3480 [P] COG2011 ABC-type metal ion transport system, permease... 161 1e-39 >PA2351 [P] COG2011 ABC-type metal ion transport system, permease component Pae Pseudomonas aeruginosa Length = 217 Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 130/212 (61%), Positives = 166/212 (78%) Query: 9 IERYGNALLDTLQMVSVSGALALVAGVPLAVLLIVSAPGGFLDWPRLHRVLGSVINGFRA 68 +ER LDTL M+ S A+ L+ G+PLA++L+ + PGG + L+R+LG ++N R+ Sbjct: 5 LERLWQGFLDTLLMIGASSAIVLLVGIPLALVLVTTGPGGIFEARLLNRILGGLVNVLRS 64 Query: 69 TPFIVLLVALIPLTRLVAGTTIGVWAAIVPLAISATPFFARIVEVSLREVDPGLVEAAQA 128 PF++L+VALIP TR++ GT+ GVWAA+VPL I+ATPFFARI EVSLREVD GLVEAAQA Sbjct: 65 VPFLILMVALIPFTRMIVGTSYGVWAAVVPLTIAATPFFARIAEVSLREVDHGLVEAAQA 124 Query: 129 LGCRKWDIVWHVYLPEALPGIVGGFTITLVALISSSAMAGAVGAGGLGDLAIRYGYQRFD 188 +GC + I+ +V LPEA PGIVGGFTITLV +I+SSAMAGA+GAGGLGDLA RYGYQRFD Sbjct: 125 MGCERRHIICNVLLPEARPGIVGGFTITLVTMINSSAMAGAIGAGGLGDLAYRYGYQRFD 184 Query: 189 TQVMVIVIAMLIVLVSLVQRTGDSYVRRLRNR 220 TQVM+ VI +L++LV+L+Q GD R L R Sbjct: 185 TQVMLTVIIVLVLLVTLIQFGGDRLARLLNKR 216 >mll4791 [P] COG2011 ABC-type metal ion transport system, permease component Mlo Mesorhizobium loti Length = 218 Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 129/207 (62%), Positives = 165/207 (79%) Query: 14 NALLDTLQMVSVSGALALVAGVPLAVLLIVSAPGGFLDWPRLHRVLGSVINGFRATPFIV 73 ++ +T+ M + SG ++LV G+PL + LI + GG + ++RVLG++INGFR+ PFI+ Sbjct: 11 RSIWETVLMTAASGLISLVFGLPLCLALISTERGGIAESLWVNRVLGAIINGFRSVPFII 70 Query: 74 LLVALIPLTRLVAGTTIGVWAAIVPLAISATPFFARIVEVSLREVDPGLVEAAQALGCRK 133 LLVALIPLTRL+ GT+IG WAAIVPL+I+ATP++ARI EVSLREVDPGL+EAA+A+G + Sbjct: 71 LLVALIPLTRLIVGTSIGTWAAIVPLSIAATPYYARIAEVSLREVDPGLIEAARAMGGNR 130 Query: 134 WDIVWHVYLPEALPGIVGGFTITLVALISSSAMAGAVGAGGLGDLAIRYGYQRFDTQVMV 193 W I+ V +PEALPGIV GFT+TLV LI +SAMAGA+GAGGLGDLAIRYGYQRF+T VMV Sbjct: 131 WTIIREVLVPEALPGIVAGFTVTLVTLIGASAMAGAIGAGGLGDLAIRYGYQRFETSVMV 190 Query: 194 IVIAMLIVLVSLVQRTGDSYVRRLRNR 220 V+ +LI+LV VQ GD V RL R Sbjct: 191 AVVIVLIILVCGVQWAGDRLVARLDRR 217 >BMEII0336 [P] COG2011 ABC-type metal ion transport system, permease component Bme Brucella melitensis Length = 230 Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 117/203 (57%), Positives = 160/203 (78%) Query: 18 DTLQMVSVSGALALVAGVPLAVLLIVSAPGGFLDWPRLHRVLGSVINGFRATPFIVLLVA 77 +T+ M S ++LV G+PLA+++I++ GG L+ +LG++INGFR+ PFI+LLVA Sbjct: 24 ETIIMAGFSSLISLVVGLPLALIMILTERGGLAQNLTLNTILGAIINGFRSVPFIILLVA 83 Query: 78 LIPLTRLVAGTTIGVWAAIVPLAISATPFFARIVEVSLREVDPGLVEAAQALGCRKWDIV 137 LIP+TR + GT+IG WA+IVPL+I+A P++ARI EVSLREVD GL+EAA+++G +W IV Sbjct: 84 LIPVTRFIVGTSIGTWASIVPLSIAAIPYYARIAEVSLREVDHGLIEAARSMGANRWTIV 143 Query: 138 WHVYLPEALPGIVGGFTITLVALISSSAMAGAVGAGGLGDLAIRYGYQRFDTQVMVIVIA 197 V +PEALPGI+ GFT+T++ LI +SAMAGA+GAGGLGDLAIRYGYQRF+TQVM+ V+ Sbjct: 144 REVLIPEALPGIIAGFTVTVITLIGASAMAGAIGAGGLGDLAIRYGYQRFETQVMIAVVI 203 Query: 198 MLIVLVSLVQRTGDSYVRRLRNR 220 +LI++V +Q GD V RL R Sbjct: 204 ILIIMVCGIQWVGDRLVNRLDKR 226 >RSc0921 [P] COG2011 ABC-type metal ion transport system, permease component Rso Ralstonia solanacearum Length = 217 Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 113/203 (55%), Positives = 150/203 (73%) Query: 18 DTLQMVSVSGALALVAGVPLAVLLIVSAPGGFLDWPRLHRVLGSVINGFRATPFIVLLVA 77 +TL MV VSG + + GVPL VLL ++ PGG L P +R+ G ++N R+ PFI+LLVA Sbjct: 15 ETLAMVGVSGGIGALFGVPLGVLLYLTGPGGVLSAPAFNRIAGLIVNAVRSVPFIILLVA 74 Query: 78 LIPLTRLVAGTTIGVWAAIVPLAISATPFFARIVEVSLREVDPGLVEAAQALGCRKWDIV 137 +IP TRL+AG++IG AA VPL ++A PF AR+VE +LREVD GL+EAAQ++G +V Sbjct: 75 VIPFTRLLAGSSIGTAAATVPLTLAAIPFIARLVETALREVDRGLIEAAQSMGATTGQLV 134 Query: 138 WHVYLPEALPGIVGGFTITLVALISSSAMAGAVGAGGLGDLAIRYGYQRFDTQVMVIVIA 197 + V LPEA+PGI+ G TIT V+L+ SAMAG +G GGLGDL IRYGYQR+++ +M+ V+ Sbjct: 135 YKVLLPEAMPGILAGLTITFVSLVGYSAMAGTIGGGGLGDLGIRYGYQRYESDIMLAVVV 194 Query: 198 MLIVLVSLVQRTGDSYVRRLRNR 220 +LIV V VQ TGD VRRL +R Sbjct: 195 ILIVFVQAVQSTGDWLVRRLSHR 217 >VC0906 [P] COG2011 ABC-type metal ion transport system, permease component Vch Vibrio cholerae Length = 225 Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 107/203 (52%), Positives = 144/203 (70%) Query: 18 DTLQMVSVSGALALVAGVPLAVLLIVSAPGGFLDWPRLHRVLGSVINGFRATPFIVLLVA 77 TL MV+++GA+ G+PL V+L + G L+ L+R LG+V+N R+ PF+VL+VA Sbjct: 23 QTLYMVAIAGAVGFALGIPLGVILHTTKKEGLLENLPLNRALGAVVNIGRSVPFLVLMVA 82 Query: 78 LIPLTRLVAGTTIGVWAAIVPLAISATPFFARIVEVSLREVDPGLVEAAQALGCRKWDIV 137 +IP+T+L+ GT IG AAIVPL I A PF AR++E +L EV GLVEAAQ++G I+ Sbjct: 83 IIPVTKLIVGTFIGTTAAIVPLTIGAIPFVARLIESALLEVPTGLVEAAQSMGATPLQII 142 Query: 138 WHVYLPEALPGIVGGFTITLVALISSSAMAGAVGAGGLGDLAIRYGYQRFDTQVMVIVIA 197 V LPEALP I+ TITLV L+S SAMAG VG GGLGD+AIRYG+ R+D +M + + Sbjct: 143 RKVLLPEALPTILNSVTITLVTLVSYSAMAGTVGGGGLGDVAIRYGFHRYDITIMAVTVV 202 Query: 198 MLIVLVSLVQRTGDSYVRRLRNR 220 MLIVLV ++Q GD+ VRR+ +R Sbjct: 203 MLIVLVQIIQSIGDALVRRVDHR 225 >FN0659 [P] COG2011 ABC-type metal ion transport system, permease component Fnu Fusobacterium nucleatum Length = 233 Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 93/203 (45%), Positives = 138/203 (67%) Query: 18 DTLQMVSVSGALALVAGVPLAVLLIVSAPGGFLDWPRLHRVLGSVINGFRATPFIVLLVA 77 +T+ MV +S +L+ G P+ VLL+++ G + + + +LG +IN R+ PFI+L++ Sbjct: 28 ETIYMVFLSTIFSLLLGFPIGVLLVITKEDGIYEMKKFNAILGVIINALRSFPFIILMIL 87 Query: 78 LIPLTRLVAGTTIGVWAAIVPLAISATPFFARIVEVSLREVDPGLVEAAQALGCRKWDIV 137 L PL+R V G+TIG AAIVPL+I A PF ARIVE +L EVD GL+EA+Q++G I+ Sbjct: 88 LFPLSRFVVGSTIGATAAIVPLSIGAAPFVARIVEGALLEVDYGLIEASQSMGASNSTII 147 Query: 138 WHVYLPEALPGIVGGFTITLVALISSSAMAGAVGAGGLGDLAIRYGYQRFDTQVMVIVIA 197 + V LPE +V G +T+++LI SAMAG +GAGGLGDLAIR+GY RF +M+ I Sbjct: 148 FKVMLPECYSTLVHGIIVTIISLIGYSAMAGTIGAGGLGDLAIRFGYLRFKLDIMIYAII 207 Query: 198 MLIVLVSLVQRTGDSYVRRLRNR 220 ++I+LV ++Q G+ V R + + Sbjct: 208 IIIILVQVIQSVGNYIVYRRQKK 230 >SMc03158 [P] COG2011 ABC-type metal ion transport system, permease component Sme Sinorhizobium meliloti Length = 221 Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 108/210 (51%), Positives = 146/210 (69%) Query: 11 RYGNALLDTLQMVSVSGALALVAGVPLAVLLIVSAPGGFLDWPRLHRVLGSVINGFRATP 70 R G+A LDT+ MV+++G + + G+P+ + L S G P ++R +G V+N R+TP Sbjct: 8 RIGSATLDTMYMVAIAGLVGSLIGLPIGIFLATSGKGELFPAPNVNRAVGLVVNATRSTP 67 Query: 71 FIVLLVALIPLTRLVAGTTIGVWAAIVPLAISATPFFARIVEVSLREVDPGLVEAAQALG 130 FI+L+VA+IPLTRL+ GT+IG AAIVPL I+ PF AR+VE ++R+VD GL+EAA+A+G Sbjct: 68 FIILVVAIIPLTRLITGTSIGTKAAIVPLTIATIPFVARLVEAAIRDVDKGLIEAARAMG 127 Query: 131 CRKWDIVWHVYLPEALPGIVGGFTITLVALISSSAMAGAVGAGGLGDLAIRYGYQRFDTQ 190 IV+ V L E+ P + T+T+V+LI SAM GAVG GGLGDL IRYGYQRF Sbjct: 128 ATPMQIVFKVLLAESRPALTLALTMTIVSLIGYSAMVGAVGGGGLGDLGIRYGYQRFMPD 187 Query: 191 VMVIVIAMLIVLVSLVQRTGDSYVRRLRNR 220 VM++V+ +LIVLV LVQ GD RR R Sbjct: 188 VMLVVVVVLIVLVQLVQSAGDRMARRFDKR 217 >YPO1319 [P] COG2011 ABC-type metal ion transport system, permease component Ype Yersinia pestis Length = 223 Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 104/207 (50%), Positives = 147/207 (71%) Query: 14 NALLDTLQMVSVSGALALVAGVPLAVLLIVSAPGGFLDWPRLHRVLGSVINGFRATPFIV 73 NA +T+ MV ++ ++ G+PL VLL VS P G L PRL+ ++G+++N R+ PF+V Sbjct: 16 NASGETIYMVMIATFFTVLIGLPLGVLLFVSRPAGVLPAPRLNTLIGALVNVGRSMPFVV 75 Query: 74 LLVALIPLTRLVAGTTIGVWAAIVPLAISATPFFARIVEVSLREVDPGLVEAAQALGCRK 133 LL+ALIP+TR + GTT+G AAIVP+ + A PFFAR+VE +L EVD G VEA ++G Sbjct: 76 LLIALIPITRWIIGTTLGSTAAIVPITLGAIPFFARVVEAALDEVDKGRVEAILSMGGSA 135 Query: 134 WDIVWHVYLPEALPGIVGGFTITLVALISSSAMAGAVGAGGLGDLAIRYGYQRFDTQVMV 193 ++ V LPEALP ++ G T+T+V L+ S+MAG +G GGLGDLAIRYGYQRF+ +VMV Sbjct: 136 RHVIQKVLLPEALPALLAGITLTVVMLVGFSSMAGVIGGGGLGDLAIRYGYQRFNNEVMV 195 Query: 194 IVIAMLIVLVSLVQRTGDSYVRRLRNR 220 + +L++LV +Q GD +VR L +R Sbjct: 196 ATLVILVILVQGIQSLGDRWVRSLAHR 222 >AGl763 [P] COG2011 ABC-type metal ion transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 222 Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 112/207 (54%), Positives = 139/207 (67%) Query: 14 NALLDTLQMVSVSGALALVAGVPLAVLLIVSAPGGFLDWPRLHRVLGSVINGFRATPFIV 73 L TL MV+V+G + + GVP+ V L S G P +R+LG ++N R+TPFI+ Sbjct: 12 KGLWQTLHMVAVAGIVGSIIGVPMGVFLATSGKGELFPAPMTNRILGLIVNAARSTPFII 71 Query: 74 LLVALIPLTRLVAGTTIGVWAAIVPLAISATPFFARIVEVSLREVDPGLVEAAQALGCRK 133 L+VA+IP TRLVAGT+IG AAIVPL ++ PF AR+VE ++REVD GL+EAA+A+G Sbjct: 72 LVVAIIPFTRLVAGTSIGTSAAIVPLTVATVPFIARLVEAAIREVDKGLIEAARAMGATP 131 Query: 134 WDIVWHVYLPEALPGIVGGFTITLVALISSSAMAGAVGAGGLGDLAIRYGYQRFDTQVMV 193 IV V L EA PGI T+TLV+LI SAM GAVG GGLGDL IRYGYQRF VM+ Sbjct: 132 LQIVTKVLLAEAKPGITLALTLTLVSLIGYSAMVGAVGGGGLGDLGIRYGYQRFMPDVML 191 Query: 194 IVIAMLIVLVSLVQRTGDSYVRRLRNR 220 V+ +LIVLV LVQ GD R R Sbjct: 192 AVVLVLIVLVQLVQSAGDRLARSFDKR 218 >BH3480 [P] COG2011 ABC-type metal ion transport system, permease component Bha Bacillus halodurans Length = 218 Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 81/207 (39%), Positives = 130/207 (62%) Query: 14 NALLDTLQMVSVSGALALVAGVPLAVLLIVSAPGGFLDWPRLHRVLGSVINGFRATPFIV 73 A +T+ M SVS V G+ L ++L +++ G +H V +++N FR+ PFI+ Sbjct: 12 EATKETIYMTSVSVVATFVIGIILGLILFLTSKGNMWQNVAIHTVFSAIVNIFRSIPFII 71 Query: 74 LLVALIPLTRLVAGTTIGVWAAIVPLAISATPFFARIVEVSLREVDPGLVEAAQALGCRK 133 L+V LIP TR + G+ +G AA+ L I A PF+AR+VE++LRE+D G++EAAQA+G Sbjct: 72 LIVLLIPFTRALFGSMLGANAALPALIIGAAPFYARMVEIALREIDKGVIEAAQAMGAGH 131 Query: 134 WDIVWHVYLPEALPGIVGGFTITLVALISSSAMAGAVGAGGLGDLAIRYGYQRFDTQVMV 193 + I+ V +PE+ P ++ G T+T +AL+S +AMAG +GAGGLG A G+QR + ++ + Sbjct: 132 FRIICRVLIPESFPALISGITVTAIALVSYTAMAGVIGAGGLGHFAFLEGFQRNNPEITL 191 Query: 194 IVIAMLIVLVSLVQRTGDSYVRRLRNR 220 + ++ LV ++Q GD + R Sbjct: 192 VATITILFLVFIIQWIGDFFTNITDKR 218