BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0342.p (139 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0437 [R] COG2391 Predicted transporter component Rso Ralstoni... 150 8e-37 XF0765 [R] COG2391 Predicted transporter component Xfa Xylella f... 121 5e-28 VCA0640 [R] COG2391 Predicted transporter component Vch Vibrio c... 120 1e-27 BMEII0808 [R] COG2391 Predicted transporter component Bme Brucel... 119 2e-27 SMa1052 [R] COG2391 Predicted transporter component Sme Sinorhiz... 112 3e-25 AGl2723 [R] COG2391 Predicted transporter component Atu Agrobact... 99 2e-21 msr8615 Non COG 94 6e-20 VNG7164 [R] COG2391 Predicted transporter component Hbs Halobact... 74 8e-14 VNG7046 [R] COG2391 Predicted transporter component Hbs Halobact... 74 8e-14 VNG6464H [R] COG2391 Predicted transporter component Hbs Halobac... 74 8e-14 >RSc0437 [R] COG2391 Predicted transporter component Rso Ralstonia solanacearum Length = 137 Score = 150 bits (379), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 86/137 (62%), Positives = 99/137 (72%) Query: 1 MTALTALLSGLVFGFGLLLSGMADPAKVLAFLDLAGAWDPSLMLVMAAAIVVGVPAFARA 60 M L A +GL+FG GL++S MA PAKVL FLDLAG WDPSL VMA AI+VG AF A Sbjct: 1 MAVLIAWAAGLLFGAGLMVSCMASPAKVLGFLDLAGRWDPSLAFVMAGAILVGAIAFFIA 60 Query: 61 RRMKASLLGQPMQLPAARQIDRRLVLGSLVFGVGWGMAGICPGPALVLVGAGQFKGLVFV 120 RR SLLG P++LPA I RLVLGS FG+GWG+AG CPGPALV +GAG K FV Sbjct: 61 RRRGRSLLGLPVRLPAGAAITARLVLGSAAFGIGWGLAGFCPGPALVALGAGAPKAWGFV 120 Query: 121 LAMLAGMLLFALLERRR 137 AMLAGM +F+ +ERRR Sbjct: 121 AAMLAGMAVFSAMERRR 137 >XF0765 [R] COG2391 Predicted transporter component Xfa Xylella fastidiosa 9a5c Length = 146 Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 62/125 (49%), Positives = 87/125 (69%), Gaps = 1/125 (0%) Query: 6 ALLSGLVFGFGLLLSGMADPAKVLAFLDLA-GAWDPSLMLVMAAAIVVGVPAFARARRMK 64 AL +GL+FGFGL LS M +P +VL+FL++A G W+PSL+ V+ +A+ V P A RR+K Sbjct: 12 ALAAGLLFGFGLALSEMINPIRVLSFLNVASGHWNPSLLFVLGSALAVAFPGMALQRRLK 71 Query: 65 ASLLGQPMQLPAARQIDRRLVLGSLVFGVGWGMAGICPGPALVLVGAGQFKGLVFVLAML 124 LL + LP+ + IDRR+V GS +FG GWG+ G+CPGPA+ + G L+FV AM Sbjct: 72 RPLLDECFHLPSKKVIDRRIVFGSAIFGTGWGLTGLCPGPAIASLSTGLGPVLLFVAAMA 131 Query: 125 AGMLL 129 AGM++ Sbjct: 132 AGMII 136 >VCA0640 [R] COG2391 Predicted transporter component Vch Vibrio cholerae Length = 154 Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 63/140 (45%), Positives = 92/140 (65%), Gaps = 5/140 (3%) Query: 5 TALLSGLVFGFGLLLSGMADPAKVLAFLDLAGAWDPSLMLVMAAAIVVGVPAFARARRMK 64 T+L++GL+FG G+++SGMADPAKV+ FLD+AG WDPSLM VM A+ + +PA+ + K Sbjct: 11 TSLVAGLLFGLGMVVSGMADPAKVIGFLDVAGTWDPSLMFVMGGALAIFMPAYFFLIKPK 70 Query: 65 ASLLG-QPMQLPAARQIDRRLVLGSLVFGVGWGMAGICPGPALVLVGAGQFKGLVFVLAM 123 A + + L +IDRRL+ GS++FG+GWG+ GICPGP + + G VF AM Sbjct: 71 AKPVNAEVFCLANNTKIDRRLISGSVIFGLGWGLVGICPGPVVSSLALGNLGAWVFFPAM 130 Query: 124 LAGM----LLFALLERRRSR 139 + G+ LL + R+ S+ Sbjct: 131 MVGLGTTNLLICIRNRKESQ 150 >BMEII0808 [R] COG2391 Predicted transporter component Bme Brucella melitensis Length = 218 Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 61/126 (48%), Positives = 83/126 (65%), Gaps = 1/126 (0%) Query: 6 ALLSGLVFGFGLLLSGMADPAKVLAFLDLA-GAWDPSLMLVMAAAIVVGVPAFARARRMK 64 AL +G++FGFGL LSGM +PA+V+ FL++A G WDPSL VM ++V +P A RR+ Sbjct: 85 ALAAGVIFGFGLSLSGMINPARVIGFLNIASGHWDPSLAFVMGGGLLVTIPGIALCRRLS 144 Query: 65 ASLLGQPMQLPAARQIDRRLVLGSLVFGVGWGMAGICPGPALVLVGAGQFKGLVFVLAML 124 A LP QIDRRL+ GS +FG+GWG+ G CPGPA+ + G + +FVLAM Sbjct: 145 APAFDTAFHLPTKTQIDRRLIAGSALFGIGWGLGGFCPGPAVAALSLGLPQVALFVLAMA 204 Query: 125 AGMLLF 130 GM++ Sbjct: 205 VGMIIH 210 >SMa1052 [R] COG2391 Predicted transporter component Sme Sinorhizobium meliloti Length = 143 Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 61/131 (46%), Positives = 81/131 (61%) Query: 6 ALLSGLVFGFGLLLSGMADPAKVLAFLDLAGAWDPSLMLVMAAAIVVGVPAFARARRMKA 65 AL SG+VFGFGL LSGM +PA+V FL++ G WDPSL V+ A+VV + M+ Sbjct: 11 ALASGIVFGFGLSLSGMLNPARVQGFLEVFGTWDPSLAFVLGGAVVVAFIGVQVMKLMRH 70 Query: 66 SLLGQPMQLPAARQIDRRLVLGSLVFGVGWGMAGICPGPALVLVGAGQFKGLVFVLAMLA 125 +P R+ID LV+GS VFG+GWG+ G CPGPA+ + G + ++FV+AML Sbjct: 71 PAFDDTFHVPTIRRIDAPLVIGSAVFGLGWGIGGFCPGPAVASLALGLPQTVLFVVAMLV 130 Query: 126 GMLLFALLERR 136 GM L L R Sbjct: 131 GMTLHDRLWSR 141 >AGl2723 [R] COG2391 Predicted transporter component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 155 Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/118 (50%), Positives = 79/118 (66%), Gaps = 1/118 (0%) Query: 13 FGFGLLLSGMADPAKVLAFLDLAGA-WDPSLMLVMAAAIVVGVPAFARARRMKASLLGQP 71 FGFGL LSGM DPA+V FLD+A + WDPSL+ V+ A+VV VP +R + +L + Sbjct: 29 FGFGLSLSGMIDPARVSGFLDVASSHWDPSLIFVLGGAVVVAVPGVLLSRLLVRPILAED 88 Query: 72 MQLPAARQIDRRLVLGSLVFGVGWGMAGICPGPALVLVGAGQFKGLVFVLAMLAGMLL 129 LP +IDR L+LGS +FG+GWG+AG CPGPAL G ++FV AM+AGM + Sbjct: 89 FSLPTKTRIDRPLILGSTIFGLGWGLAGFCPGPALSAFALGLAPVILFVCAMIAGMFV 146 >msr8615 Non COG Length = 285 Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 63/128 (49%), Positives = 80/128 (62%) Query: 1 MTALTALLSGLVFGFGLLLSGMADPAKVLAFLDLAGAWDPSLMLVMAAAIVVGVPAFARA 60 + + AL +G +FG GL LSGM DP +V FLD+ GAWDPSL V+ A+ V + A Sbjct: 147 LQPVAALAAGTLFGLGLALSGMLDPVRVQGFLDVFGAWDPSLAFVLGGAVAVAMGGMAWL 206 Query: 61 RRMKASLLGQPMQLPAARQIDRRLVLGSLVFGVGWGMAGICPGPALVLVGAGQFKGLVFV 120 RRM LL LP +ID RL++GS +FG+GWG+ G CPGPAL + G LVFV Sbjct: 207 RRMSRPLLADRFHLPMKSRIDARLIVGSAIFGLGWGLGGFCPGPALASLSLGLMPTLVFV 266 Query: 121 LAMLAGML 128 MLAGM+ Sbjct: 267 AFMLAGMV 274 >VNG7164 [R] COG2391 Predicted transporter component Hbs Halobacterium sp. NRC-1 Length = 152 Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 54/130 (41%), Positives = 70/130 (53%), Gaps = 10/130 (7%) Query: 7 LLSGLVFGFGLLLSGMADPAKVLAFLDLAGAWDPSLMLVM-AAAIVVGVPAFARARRM-K 64 L+ GL+FGFGL S MA P VL FL D L+ VM A V GV F R + + Sbjct: 13 LVGGLIFGFGLAYSQMARPEVVLNFLQFE---DFGLVFVMFGGAAVTGVTFFVAPRLLGR 69 Query: 65 ASLLGQPMQLPAARQIDRRLVLGSLVFGVGWGMAGICPGPALVLVGAGQFKGLVFVLAML 124 A L G Q + DR +++G +FGVGWG++GICPG A +G G + +L L Sbjct: 70 APLTGDSFQ-RRLKSFDRNVLIGGAIFGVGWGLSGICPGAAYASLGIGN----ITILWAL 124 Query: 125 AGMLLFALLE 134 AGM L A + Sbjct: 125 AGMFLGAYTQ 134 >VNG7046 [R] COG2391 Predicted transporter component Hbs Halobacterium sp. NRC-1 Length = 152 Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 54/130 (41%), Positives = 70/130 (53%), Gaps = 10/130 (7%) Query: 7 LLSGLVFGFGLLLSGMADPAKVLAFLDLAGAWDPSLMLVM-AAAIVVGVPAFARARRM-K 64 L+ GL+FGFGL S MA P VL FL D L+ VM A V GV F R + + Sbjct: 13 LVGGLIFGFGLAYSQMARPEVVLNFLQFE---DFGLVFVMFGGAAVTGVTFFVAPRLLGR 69 Query: 65 ASLLGQPMQLPAARQIDRRLVLGSLVFGVGWGMAGICPGPALVLVGAGQFKGLVFVLAML 124 A L G Q + DR +++G +FGVGWG++GICPG A +G G + +L L Sbjct: 70 APLTGDSFQ-RRLKSFDRNVLIGGAIFGVGWGLSGICPGAAYASLGIGN----ITILWAL 124 Query: 125 AGMLLFALLE 134 AGM L A + Sbjct: 125 AGMFLGAYTQ 134 >VNG6464H [R] COG2391 Predicted transporter component Hbs Halobacterium sp. NRC-1 Length = 152 Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 54/130 (41%), Positives = 70/130 (53%), Gaps = 10/130 (7%) Query: 7 LLSGLVFGFGLLLSGMADPAKVLAFLDLAGAWDPSLMLVM-AAAIVVGVPAFARARRM-K 64 L+ GL+FGFGL S MA P VL FL D L+ VM A V GV F R + + Sbjct: 13 LVGGLIFGFGLAYSQMARPEVVLNFLQFE---DFGLVFVMFGGAAVTGVTFFVAPRLLGR 69 Query: 65 ASLLGQPMQLPAARQIDRRLVLGSLVFGVGWGMAGICPGPALVLVGAGQFKGLVFVLAML 124 A L G Q + DR +++G +FGVGWG++GICPG A +G G + +L L Sbjct: 70 APLTGDSFQ-RRLKSFDRNVLIGGAIFGVGWGLSGICPGAAYASLGIGN----ITILWAL 124 Query: 125 AGMLLFALLE 134 AGM L A + Sbjct: 125 AGMFLGAYTQ 134