BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0292.p (220 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2559 [S] COG0586 Uncharacterized membrane-associated protein ... 286 3e-77 PA4029 [S] COG0586 Uncharacterized membrane-associated protein P... 229 5e-60 STM2367 [S] COG0586 Uncharacterized membrane-associated protein ... 205 6e-53 dedA [S] COG0586 Uncharacterized membrane-associated protein Eco... 204 2e-52 ZdedA [S] COG0586 Uncharacterized membrane-associated protein Ec... 204 2e-52 ECs3201 [S] COG0586 Uncharacterized membrane-associated protein ... 204 2e-52 YPO2767 [S] COG0586 Uncharacterized membrane-associated protein ... 201 7e-52 NMB1052 [S] COG0586 Uncharacterized membrane-associated protein ... 194 1e-49 NMA1250 [S] COG0586 Uncharacterized membrane-associated protein ... 194 1e-49 lin0035 [S] COG0586 Uncharacterized membrane-associated protein ... 169 4e-42 >RSc2559 [S] COG0586 Uncharacterized membrane-associated protein Rso Ralstonia solanacearum Length = 218 Score = 286 bits (731), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 135/209 (64%), Positives = 176/209 (84%) Query: 4 LQLLDVLVHVDKYLGVLIEQYGALIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTFCAT 63 +QL+D+++HVDK LG+LI+QYGA +Y +LF IVF ETGLVVLPFLPGD+LLFIAG CAT Sbjct: 5 MQLIDIVLHVDKSLGMLIQQYGAWVYVLLFAIVFAETGLVVLPFLPGDTLLFIAGAMCAT 64 Query: 64 GAMDIWLLMTLLVVAAVAGNTLNYWIGGWVGQRVYTHNYRWLNPEALRKTHAFYEKHGGK 123 G MD WLL+ LLV AAV GNT+NY++G W+G +V+ + R+L+ EAL KTHAFYE+HGGK Sbjct: 65 GQMDAWLLIALLVTAAVTGNTVNYFVGTWIGPKVFDGHIRFLDHEALLKTHAFYERHGGK 124 Query: 124 TIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVGLVVLGYLFGNIPVVQQN 183 T+V+ARF P+VRTFAPF+AGVS M+FA+FQLFN++GA LWV LV+ G FG +PV++ + Sbjct: 125 TLVMARFIPVVRTFAPFVAGVSKMTFAKFQLFNMIGAVLWVAILVLSGEAFGTVPVIRDH 184 Query: 184 LNTLVLIGIVAAVFPIVLGGLWQIWRKLR 212 LNT+VLIG+ AAV P+VLGGLW++ ++ R Sbjct: 185 LNTIVLIGLGAAVVPLVLGGLWKLLKRRR 213 >PA4029 [S] COG0586 Uncharacterized membrane-associated protein Pae Pseudomonas aeruginosa Length = 221 Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 109/203 (53%), Positives = 155/203 (76%), Gaps = 2/203 (0%) Query: 1 MDYLQLLDVLVHVDKYLGVLIEQYGALIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTF 60 MD+ +D+++H+D YL +L+ YG IYA+LFL++FCETGLVV PFLPGDSLLFIAG Sbjct: 1 MDF-NPIDLILHLDTYLAMLVSNYGVWIYAILFLVIFCETGLVVTPFLPGDSLLFIAGAI 59 Query: 61 CATGAMDIWLLMTLLVVAAVAGNTLNYWIGGWVGQRVYTH-NYRWLNPEALRKTHAFYEK 119 CATG MD WLL LL+VAA+ G++ NY IG +G+R++++ + + + L +TH FYE+ Sbjct: 60 CATGGMDPWLLGGLLMVAAITGDSTNYVIGRTLGKRLFSNPDSKVFRRDYLDRTHEFYER 119 Query: 120 HGGKTIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVGLVVLGYLFGNIPV 179 HGGKT+ +ARF PIVRTFAPF+AG++ M + RF +F+V+G WV GLV LGY FGN+P Sbjct: 120 HGGKTVTLARFLPIVRTFAPFVAGMAKMHYPRFVMFSVVGTVAWVGGLVTLGYFFGNVPF 179 Query: 180 VQQNLNTLVLIGIVAAVFPIVLG 202 +++NL+ LV+ I+ ++ P++LG Sbjct: 180 IKKNLSLLVIGIILLSLLPMILG 202 >STM2367 [S] COG0586 Uncharacterized membrane-associated protein Sty Salmonella typhimurium LT2 Length = 219 Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 99/217 (45%), Positives = 149/217 (68%), Gaps = 7/217 (3%) Query: 6 LLDVLVHVDKYLGVLIEQYGALIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTFCA--T 63 ++D ++H+D +L L+ +YG +YA+LFLI+FCETGLVV PFLPGDSLLF+AG + T Sbjct: 7 IIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALASLET 66 Query: 64 GAMDIWLLMTLLVVAAVAGNTLNYWIGGWVGQRVYTH-NYRWLNPEALRKTHAFYEKHGG 122 +++ +++ L+++AA+ G+ +NY IG G++++++ N + L KTH FYEKHGG Sbjct: 67 NDLNVHVMVALMLIAAIVGDAVNYTIGRLFGEKLFSNPNSKIFRRSYLDKTHQFYEKHGG 126 Query: 123 KTIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVGLVVLGYLFGNIPVVQQ 182 KTI++ARF PIVRTFAPF+AG+ MS+ F +NV+GA LWV+ GY FG IP++Q Sbjct: 127 KTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVIGALLWVLLFTYAGYFFGTIPLIQD 186 Query: 183 NLNTLVLIGIVAAVFPIVLGGLWQIWRKLRGKRKVSN 219 NL L++ IV ++ P G+ +I R R + + Sbjct: 187 NLKLLIVGIIVVSILP----GVIEIVRHKRAASRAAK 219 >dedA [S] COG0586 Uncharacterized membrane-associated protein Eco Escherichia coli K12 Length = 219 Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 100/208 (48%), Positives = 146/208 (70%), Gaps = 7/208 (3%) Query: 6 LLDVLVHVDKYLGVLIEQYGALIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTFCA--T 63 L+D ++H+D +L L+ +YG +YA+LFLI+FCETGLVV PFLPGDSLLF+AG + T Sbjct: 7 LIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALASLET 66 Query: 64 GAMDIWLLMTLLVVAAVAGNTLNYWIGGWVGQRVYTH-NYRWLNPEALRKTHAFYEKHGG 122 +++ +++ L+++AA+ G+ +NY IG G++++++ N + L KTH FYEKHGG Sbjct: 67 NDLNVHMMVVLMLIAAIVGDAVNYTIGRLFGEKLFSNPNSKIFRRSYLDKTHQFYEKHGG 126 Query: 123 KTIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVGLVVLGYLFGNIPVVQQ 182 KTI++ARF PIVRTFAPF+AG+ MS+ F +NV+GA LWV+ GY FG IP+VQ Sbjct: 127 KTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVIGALLWVLLFTYAGYFFGTIPMVQD 186 Query: 183 NLNTLVLIGIVAAVFPIVLGGLWQIWRK 210 NL L++ IV ++ P G+ +I R Sbjct: 187 NLKLLIVGIIVVSILP----GVIEIIRH 210 >ZdedA [S] COG0586 Uncharacterized membrane-associated protein EcZ Escherichia coli O157:H7 EDL933 Length = 219 Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 100/208 (48%), Positives = 146/208 (70%), Gaps = 7/208 (3%) Query: 6 LLDVLVHVDKYLGVLIEQYGALIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTFCA--T 63 L+D ++H+D +L L+ +YG +YA+LFLI+FCETGLVV PFLPGDSLLF+AG + T Sbjct: 7 LIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALASLET 66 Query: 64 GAMDIWLLMTLLVVAAVAGNTLNYWIGGWVGQRVYTH-NYRWLNPEALRKTHAFYEKHGG 122 +++ +++ L+++AA+ G+ +NY IG G++++++ N + L KTH FYEKHGG Sbjct: 67 NDLNVHMMVVLMLIAAIVGDAVNYTIGRLFGEKLFSNPNSKIFRRSYLDKTHQFYEKHGG 126 Query: 123 KTIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVGLVVLGYLFGNIPVVQQ 182 KTI++ARF PIVRTFAPF+AG+ MS+ F +NV+GA LWV+ GY FG IP+VQ Sbjct: 127 KTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVIGALLWVLLFTYAGYFFGTIPMVQD 186 Query: 183 NLNTLVLIGIVAAVFPIVLGGLWQIWRK 210 NL L++ IV ++ P G+ +I R Sbjct: 187 NLKLLIVGIIVVSILP----GVIEIIRH 210 >ECs3201 [S] COG0586 Uncharacterized membrane-associated protein Ecs Escherichia coli O157:H7 Length = 219 Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 100/208 (48%), Positives = 146/208 (70%), Gaps = 7/208 (3%) Query: 6 LLDVLVHVDKYLGVLIEQYGALIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTFCA--T 63 L+D ++H+D +L L+ +YG +YA+LFLI+FCETGLVV PFLPGDSLLF+AG + T Sbjct: 7 LIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALASLET 66 Query: 64 GAMDIWLLMTLLVVAAVAGNTLNYWIGGWVGQRVYTH-NYRWLNPEALRKTHAFYEKHGG 122 +++ +++ L+++AA+ G+ +NY IG G++++++ N + L KTH FYEKHGG Sbjct: 67 NDLNVHMMVVLMLIAAIVGDAVNYTIGRLFGEKLFSNPNSKIFRRSYLDKTHQFYEKHGG 126 Query: 123 KTIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVGLVVLGYLFGNIPVVQQ 182 KTI++ARF PIVRTFAPF+AG+ MS+ F +NV+GA LWV+ GY FG IP+VQ Sbjct: 127 KTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVIGALLWVLLFTYAGYFFGTIPMVQD 186 Query: 183 NLNTLVLIGIVAAVFPIVLGGLWQIWRK 210 NL L++ IV ++ P G+ +I R Sbjct: 187 NLKLLIVGIIVVSILP----GVIEIIRH 210 >YPO2767 [S] COG0586 Uncharacterized membrane-associated protein Ype Yersinia pestis Length = 220 Score = 201 bits (512), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 158/223 (70%), Gaps = 8/223 (3%) Query: 1 MDYLQ-LLDVLVHVDKYLGVLIEQYGALIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGT 59 M++++ ++D ++++D +L L+ QYG +YA+LFLI+FCETGLVV PFLPGDSLLF+AG Sbjct: 1 MEFIRFVIDFILNIDVHLAELVAQYGIWVYAILFLILFCETGLVVTPFLPGDSLLFVAGA 60 Query: 60 FCA--TGAMDIWLLMTLLVVAAVAGNTLNYWIGGWVGQRVYTH-NYRWLNPEALRKTHAF 116 + + +++ ++TL+V+AA+ G+ +NY IG G++++++ + + L KTH F Sbjct: 61 LASLPSNDLNVHTMVTLMVIAAILGDAINYTIGRIFGEKLFSNPDSKIFRRSYLDKTHQF 120 Query: 117 YEKHGGKTIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVGLVVLGYLFGN 176 YEKHGGK I++ARF PI+RTFAPF+AG+ MS+ F +NV+GA +WV+ GYLFGN Sbjct: 121 YEKHGGKAIILARFVPIIRTFAPFVAGMGKMSYRHFAAYNVIGALVWVLLFTYAGYLFGN 180 Query: 177 IPVVQQNLNTLVLIGIVAAVFPIVLGGLWQIWRKLRGKRKVSN 219 +P+VQ NL L++I IV ++ P G++++WR R + N Sbjct: 181 VPIVQNNLKLLIVIIIVVSILP----GVFEVWRHRRAAVRQKN 219 >NMB1052 [S] COG0586 Uncharacterized membrane-associated protein Nme Neisseria meningitidis MC58 Length = 214 Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 110/212 (51%), Positives = 144/212 (67%), Gaps = 6/212 (2%) Query: 7 LDVLVHVDKYLGVLIEQYGALIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTFCATGAM 66 +D ++H+D++L L QYG IYA+LFLIVFCETGL+V P LPGDSLLF AG A G M Sbjct: 6 IDFILHIDQHLLALSAQYGVWIYAILFLIVFCETGLIVTPLLPGDSLLFAAGGIAALGGM 65 Query: 67 DIWLLMTLLVVAAVAGNTLNYWIGGWVGQRVYTH-NYRWLNPEALRKTHAFYEKHGGKTI 125 DI L++ LL +AA+ G+ LN+ +G + G R++ + + + E L KTH FYEKHGGKTI Sbjct: 66 DIHLMVALLSLAAILGDALNFTVGKYFGGRLFANPDSKIFRREYLDKTHRFYEKHGGKTI 125 Query: 126 VIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVGLVVLGYLFGNIPVVQQNLN 185 +IARF PIVRTFAPF+AG+ M +A+F +N++G LWV+ GY F N PVV+ NL Sbjct: 126 IIARFMPIVRTFAPFVAGMGKMHYAKFIRYNIIGGLLWVILFSYAGYFFANFPVVKNNLG 185 Query: 186 TLVLIGIVAAVFPIVLGGLWQIWR-KLRGKRK 216 LV+ GI+ VL G +I R KL K K Sbjct: 186 -LVMGGIIIVS---VLPGAVEIARAKLAVKSK 213 >NMA1250 [S] COG0586 Uncharacterized membrane-associated protein NmA Neisseria meningitidis Z2491 Length = 214 Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 110/212 (51%), Positives = 144/212 (67%), Gaps = 6/212 (2%) Query: 7 LDVLVHVDKYLGVLIEQYGALIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTFCATGAM 66 +D ++H+D++L L QYG IYA+LFLIVFCETGL+V P LPGDSLLF AG A G M Sbjct: 6 IDFILHIDQHLLALSAQYGVWIYAILFLIVFCETGLIVTPLLPGDSLLFAAGGIAALGGM 65 Query: 67 DIWLLMTLLVVAAVAGNTLNYWIGGWVGQRVYTH-NYRWLNPEALRKTHAFYEKHGGKTI 125 DI L++ LL +AA+ G+ LN+ +G + G R++ + + + E L KTH FYEKHGGKTI Sbjct: 66 DIHLMVALLSLAAILGDALNFTVGKYFGGRLFANPDSKIFRREYLDKTHRFYEKHGGKTI 125 Query: 126 VIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVGLVVLGYLFGNIPVVQQNLN 185 +IARF PIVRTFAPF+AG+ M +A+F +N++G LWV+ GY F N PVV+ NL Sbjct: 126 IIARFMPIVRTFAPFVAGMGKMHYAKFIRYNIIGGLLWVILFSYAGYFFANFPVVKNNLG 185 Query: 186 TLVLIGIVAAVFPIVLGGLWQIWR-KLRGKRK 216 LV+ GI+ VL G +I R KL K K Sbjct: 186 -LVMGGIIIVS---VLPGAVEIARAKLAVKSK 213 >lin0035 [S] COG0586 Uncharacterized membrane-associated protein Lin Listeria innocua Length = 219 Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 94/207 (45%), Positives = 136/207 (65%), Gaps = 5/207 (2%) Query: 1 MDYLQ-LLDVLVHVDKYLGVLIEQYGALIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGT 59 MD++ ++D ++H+D++L +I +G Y +LFLIVF ETGLVV PFLPGDSLLF AG Sbjct: 1 MDFITYIIDFILHIDQHLVEIINNFGIWTYIILFLIVFIETGLVVFPFLPGDSLLFAAGA 60 Query: 60 FCATGA--MDIWLLMTLLVVAAVAGNTLNYWIGGWVGQRVYTHNY--RWLNPEALRKTHA 115 + I L+ L +AAV G+T+NY IG +G + ++ + +N E + K A Sbjct: 61 LSVLDGSILHIVPLIITLWLAAVLGDTVNYHIGKKIGTSIPEDSWFGKLINKEKMEKAEA 120 Query: 116 FYEKHGGKTIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVGLVVLGYLFG 175 F+ KHGGKTI IARF P +RTFAPF+AG S M++ F +N+LGA +WV+ + GY FG Sbjct: 121 FFNKHGGKTIFIARFMPFIRTFAPFVAGASRMNYRYFLNYNILGATVWVLLCTLAGYFFG 180 Query: 176 NIPVVQQNLNTLVLIGIVAAVFPIVLG 202 N P+V+ N + +V+ IV +V P+V+ Sbjct: 181 NFPIVKDNFSLVVIGIIVVSVIPMVVS 207