BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0260.p (166 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp0743 [S] COG3516 Uncharacterized protein conserved in bacteri... 241 4e-64 PA2365 [S] COG3516 Uncharacterized protein conserved in bacteria... 164 8e-41 AGl1045 [S] COG3516 Uncharacterized protein conserved in bacteri... 134 8e-32 YPO2939 [S] COG3516 Uncharacterized protein conserved in bacteri... 124 1e-28 YPO0500 [S] COG3516 Uncharacterized protein conserved in bacteri... 124 1e-28 PA0083 [S] COG3516 Uncharacterized protein conserved in bacteria... 124 1e-28 STM0273 [S] COG3516 Uncharacterized protein conserved in bacteri... 121 6e-28 VCA0107 [S] COG3516 Uncharacterized protein conserved in bacteri... 88 7e-18 mlr2337 Non COG 85 7e-17 YPO1465 [S] COG3516 Uncharacterized protein conserved in bacteri... 81 1e-15 >RSp0743 [S] COG3516 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 170 Score = 241 bits (616), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 116/165 (70%), Positives = 143/165 (86%) Query: 1 MAKRESIQKKLQKVRPPRVQMTYDVEIGDAIEKKELAFVTGVVGDFGGNSEVPQPRLKDR 60 MAK+ES+QK+LQKVRPPRVQ+TYDVE GDAIE+KEL FV GVV D G SEV QP+L+DR Sbjct: 1 MAKKESVQKRLQKVRPPRVQLTYDVEKGDAIEQKELPFVVGVVADLSGQSEVAQPKLRDR 60 Query: 61 KFVNVDPDNFDEVMKAIEPRAVYRVPNELSDKGGEFAVELKFRSMEDFRPEAVVQQVEPL 120 KFVN+D DNFD+VM A EPRA ++V N L+++GG F V+LKFRS+EDF PEAVV Q+EPL Sbjct: 61 KFVNIDRDNFDDVMSAAEPRAAFQVQNTLTEEGGRFGVDLKFRSLEDFSPEAVVNQIEPL 120 Query: 121 RKLLEARTKLADLRNKIAGNDKLEDILNDVLNSTEKLAELRQQTN 165 R+LLEAR+KLADLRNK+AGNDKLED+L++VLN+TE L +L +T+ Sbjct: 121 RQLLEARSKLADLRNKLAGNDKLEDLLSEVLNNTEALQKLGVKTD 165 >PA2365 [S] COG3516 Uncharacterized protein conserved in bacteria Pae Pseudomonas aeruginosa Length = 181 Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 80/157 (50%), Positives = 111/157 (70%) Query: 5 ESIQKKLQKVRPPRVQMTYDVEIGDAIEKKELAFVTGVVGDFGGNSEVPQPRLKDRKFVN 64 ES Q KL +VRPPRVQ+TYDVEIG+AIEKKEL V G++ D G + P +L +R+FV+ Sbjct: 3 ESTQHKLDRVRPPRVQITYDVEIGNAIEKKELPLVVGILADLSGKPDTPPAKLVERRFVD 62 Query: 65 VDPDNFDEVMKAIEPRAVYRVPNELSDKGGEFAVELKFRSMEDFRPEAVVQQVEPLRKLL 124 +D DNF+E++ +I PRA +V N +S + VEL+F +EDF P +V+QV PLR+L Sbjct: 63 IDRDNFNEILSSISPRATLQVDNTISGDDSKLNVELRFNHIEDFDPVNLVKQVVPLRRLF 122 Query: 125 EARTKLADLRNKIAGNDKLEDILNDVLNSTEKLAELR 161 EAR +L DL K+ GND L+ +L DV+ +TE L E++ Sbjct: 123 EARQRLRDLLTKLDGNDDLDQLLQDVVANTEGLQEIK 159 >AGl1045 [S] COG3516 Uncharacterized protein conserved in bacteria Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 178 Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 74/155 (47%), Positives = 97/155 (62%) Query: 6 SIQKKLQKVRPPRVQMTYDVEIGDAIEKKELAFVTGVVGDFGGNSEVPQPRLKDRKFVNV 65 S+ +KL++VR PRV + Y+VE A+ KEL FV GV+GDF GN P +RKFV + Sbjct: 12 SVHEKLERVRKPRVHIKYEVETEGAMVVKELPFVVGVLGDFSGNPTQPLKPFGERKFVQI 71 Query: 66 DPDNFDEVMKAIEPRAVYRVPNELSDKGGEFAVELKFRSMEDFRPEAVVQQVEPLRKLLE 125 D DNFDEVM+ + P V N L G + V LKF SM+DF P AVVQQV L+ LL+ Sbjct: 72 DRDNFDEVMRRMTPGLNISVANTLQKDGTDMQVNLKFESMDDFEPGAVVQQVPALKALLD 131 Query: 126 ARTKLADLRNKIAGNDKLEDILNDVLNSTEKLAEL 160 AR +L DL +K ++ LE +L D+L + LA L Sbjct: 132 ARNELRDLLSKADRSEDLERMLEDILQNKTDLATL 166 >YPO2939 [S] COG3516 Uncharacterized protein conserved in bacteria Ype Yersinia pestis Length = 174 Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 65/160 (40%), Positives = 101/160 (63%), Gaps = 1/160 (0%) Query: 1 MAKRESIQKKLQKVRPPRVQMTYDVEIGDAIEKKELAFVTGVVGDFGGNSEVPQPRLKDR 60 M + + QK + + R PRVQ+ YDVEI + +K EL FV GV+ D G P P + DR Sbjct: 1 MVSKSNSQKFIARNRAPRVQIEYDVEIYGSEKKVELPFVMGVLADLSGKPLEPLPSVADR 60 Query: 61 KFVNVDPDNFDEVMKAIEPRAVYRVPNELSDKGGEFAVELKFRSMEDFRPEAVVQQVEPL 120 K +++D DNFDE MKA++PR + V N L+ + G+ V++ F SM+DF P+A+ ++V+ L Sbjct: 61 KLLDIDIDNFDERMKAMKPRVAFAVLNTLTGE-GQLMVDITFESMDDFSPDAIAKKVDSL 119 Query: 121 RKLLEARTKLADLRNKIAGNDKLEDILNDVLNSTEKLAEL 160 +LL+ART+LA+L+ + G E+++ +L L L Sbjct: 120 SQLLDARTQLANLQTYMDGKAGAEELVMKLLKDKSLLTTL 159 >YPO0500 [S] COG3516 Uncharacterized protein conserved in bacteria Ype Yersinia pestis Length = 186 Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 68/160 (42%), Positives = 97/160 (60%) Query: 1 MAKRESIQKKLQKVRPPRVQMTYDVEIGDAIEKKELAFVTGVVGDFGGNSEVPQPRLKDR 60 MAK S QK + + PRVQ+ YDVEI + +K EL FVTGV+ D G+ P P ++DR Sbjct: 1 MAKDASSQKFIGRNNAPRVQIEYDVEIYGSNKKVELPFVTGVMADLSGHRAKPLPAVEDR 60 Query: 61 KFVNVDPDNFDEVMKAIEPRAVYRVPNELSDKGGEFAVELKFRSMEDFRPEAVVQQVEPL 120 KF+ D DNFD M+AI+PR + V N LS+ +EL F SM+DF P ++ +++ + Sbjct: 61 KFLTFDQDNFDARMRAIKPRLKFYVDNTLSEDNELLDIELDFESMDDFSPGSLARRIPQM 120 Query: 121 RKLLEARTKLADLRNKIAGNDKLEDILNDVLNSTEKLAEL 160 KLLEART LA+L + G E+++ +L + L L Sbjct: 121 EKLLEARTHLAELITYMDGKTSAEEVVKQLLEQPDFLQNL 160 >PA0083 [S] COG3516 Uncharacterized protein conserved in bacteria Pae Pseudomonas aeruginosa Length = 172 Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 64/147 (43%), Positives = 94/147 (63%), Gaps = 1/147 (0%) Query: 1 MAKRESIQKKLQKVRPPRVQMTYDVEIGDAIEKKELAFVTGVVGDFGGNSEVPQPRLKDR 60 M S QK + + R PRVQ+ YDVE+ A +K +L FV GV+ D G PQ + DR Sbjct: 1 MGSTTSSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVMADLAGKPAEPQAAVADR 60 Query: 61 KFVNVDPDNFDEVMKAIEPRAVYRVPNELSDKGGEFAVELKFRSMEDFRPEAVVQQVEPL 120 KF+ +D DNFD +KA++PR + VPN L+ +G ++++ F SM+DF P AV ++V+ L Sbjct: 61 KFLEIDVDNFDARLKAMKPRVAFNVPNVLTGEGN-LSLDITFESMDDFSPAAVARKVDSL 119 Query: 121 RKLLEARTKLADLRNKIAGNDKLEDIL 147 KLLEART+LA+L + G E+++ Sbjct: 120 NKLLEARTQLANLLTYMDGKTGAEEMI 146 >STM0273 [S] COG3516 Uncharacterized protein conserved in bacteria Sty Salmonella typhimurium LT2 Length = 180 Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 64/151 (42%), Positives = 96/151 (63%), Gaps = 1/151 (0%) Query: 1 MAKRESIQKKLQKVRPPRVQMTYDVEIGDAIEKKELAFVTGVVGDFGGNSEVPQPRLKDR 60 MA S QK + + R PRVQ+ YDVEI + +K EL FV V+ D G P + DR Sbjct: 1 MAINNSAQKFIARNRAPRVQIEYDVEIYGSEKKIELPFVMAVLADLAGKPREELPPVTDR 60 Query: 61 KFVNVDPDNFDEVMKAIEPRAVYRVPNELSDKGGEFAVELKFRSMEDFRPEAVVQQVEPL 120 KF+++D DNF+E MKAI PR + VPN L+ + G+ V++ +M+DF P + ++V+ L Sbjct: 61 KFLDIDIDNFNERMKAIAPRVAFAVPNTLTGE-GQLMVDITLENMDDFSPAQIARKVDAL 119 Query: 121 RKLLEARTKLADLRNKIAGNDKLEDILNDVL 151 +LLEART+LA+L+ + G E+++N +L Sbjct: 120 NQLLEARTQLANLQTYMDGKAGAENLVNKLL 150 >VCA0107 [S] COG3516 Uncharacterized protein conserved in bacteria Vch Vibrio cholerae Length = 168 Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 57/149 (38%), Positives = 82/149 (55%), Gaps = 3/149 (2%) Query: 18 RVQMTYDVEIGDAIEKKELAFVTGVVGDFGGNSEVPQPRLKDRKFVNVDPDNFDEVMKAI 77 R+ + Y GDA + EL T VVGDF G++E Q L++R V VD +NF+ VM+ Sbjct: 12 RINIKYIPATGDAQAEVELPLKTLVVGDFKGHAE--QTPLEERATVTVDKNNFEAVMRES 69 Query: 78 EPRAVYRVPNELSD-KGGEFAVELKFRSMEDFRPEAVVQQVEPLRKLLEARTKLADLRNK 136 E + V N+L+D + E VEL F+S+ DF P+AV QV L+KL+E R L L+ Sbjct: 70 ELKITATVKNKLTDDENAELPVELNFKSLADFAPDAVASQVPELKKLIELREALVALKGP 129 Query: 137 IAGNDKLEDILNDVLNSTEKLAELRQQTN 165 + + L +LNS E +L + N Sbjct: 130 LGNIPAFRERLQSLLNSEESREKLLAELN 158 >mlr2337 Non COG Length = 178 Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 57/167 (34%), Positives = 86/167 (51%), Gaps = 7/167 (4%) Query: 5 ESIQKKLQKVRPPRVQMTYDVEIGDAIEKKELAFVTGVVGDFGGNSEVPQPR--LKDRKF 62 ES K +++ R PRVQ+ YDVE + EL FV V+ D G S+ + + DR F Sbjct: 4 ESKAKVIERNRAPRVQIAYDVETYGSPTTIELPFVMAVMADLSGASQTKEASKSVLDRNF 63 Query: 63 VNVDPDNFDEVMKAIEPRAVYRVPNELSDKGG-----EFAVELKFRSMEDFRPEAVVQQV 117 V D + F + M+A+ PR RV N L G E A++L F M DF P+ V +QV Sbjct: 64 VETDANRFPKFMEAMGPRVKARVKNTLPQAEGAERDEELAIDLTFSKMGDFAPDKVAEQV 123 Query: 118 EPLRKLLEARTKLADLRNKIAGNDKLEDILNDVLNSTEKLAELRQQT 164 L ++L+ R +L +L + G E + +LN+ L+++ Q Sbjct: 124 PQLAEILKMRRQLEELLGFMDGRVDAEKRIAQLLNNEPLLSKIASQA 170 >YPO1465 [S] COG3516 Uncharacterized protein conserved in bacteria Ype Yersinia pestis Length = 166 Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 53/147 (36%), Positives = 80/147 (54%), Gaps = 6/147 (4%) Query: 18 RVQMTYDVEIGDAIEKKELAFVTGVVGDFGGNSEVPQPRLKDRKFVNVDPDNFDEVMKAI 77 R+ + D+ G A +K EL V+GD+ E Q L +R+ +N++ +NF+ V+ Sbjct: 14 RINIKLDLHTGGAQKKVELPLKLLVMGDYSNGQE--QRPLSEREKLNINKNNFNSVLAEF 71 Query: 78 EPRAVYRVPNELSDKGGEFAVELKFRSMEDFRPEAVVQQVEPLRKLLEARTKLADLRNKI 137 +P VP+ L+ + AV L FR M+DF PE+V +Q+ LR LL R L DL++ + Sbjct: 72 QPSLKLAVPDTLAGDNTDTAVALTFREMKDFEPESVARQIPQLRALLAMRNLLRDLKSNL 131 Query: 138 AGND----KLEDILNDVLNSTEKLAEL 160 N +LE+IL D S E AEL Sbjct: 132 LDNATFRRELENILKDDALSDELRAEL 158