BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0216.p (120 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2731 [H] COG0853 Aspartate 1-decarboxylase Rso Ralstonia sola... 203 6e-53 aq_476 [H] COG0853 Aspartate 1-decarboxylase Aae Aquifex aeolicus 146 9e-36 DR0718 [H] COG0853 Aspartate 1-decarboxylase Dra Deinococcus rad... 143 9e-35 XF0231 [H] COG0853 Aspartate 1-decarboxylase Xfa Xylella fastidi... 140 6e-34 NMB1282 [H] COG0853 Aspartate 1-decarboxylase Nme Neisseria meni... 137 4e-33 YPO3403 [H] COG0853 Aspartate 1-decarboxylase Ype Yersinia pestis 137 8e-33 PA4731 [H] COG0853 Aspartate 1-decarboxylase Pae Pseudomonas aer... 137 8e-33 STM0180 [H] COG0853 Aspartate 1-decarboxylase Sty Salmonella typ... 135 2e-32 NMA1492 [H] COG0853 Aspartate 1-decarboxylase NmA Neisseria meni... 135 2e-32 CAC2916 [H] COG0853 Aspartate 1-decarboxylase Cac Clostridium ac... 132 2e-31 >RSc2731 [H] COG0853 Aspartate 1-decarboxylase Rso Ralstonia solanacearum Length = 120 Score = 203 bits (517), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 95/120 (79%), Positives = 109/120 (90%) Query: 1 MQRIMLRAKIHRASVTQCDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAI 60 MQR MLRAK+HRA+VTQ DL+YEGSCGIDEDLL+AAD+RE+EKIELYNVNNGERFSTY I Sbjct: 1 MQRNMLRAKLHRATVTQADLDYEGSCGIDEDLLDAADMREYEKIELYNVNNGERFSTYII 60 Query: 61 RGKRGSGEISLNGAAARLAHLGDLLIICTYAPMSDEEVATYKPKVVFVDDKNRITSLKAI 120 +GKRGSGEISLNGAAAR AH+GD LIICTYAPM++EEVA YKPK+V + D NRI +KA+ Sbjct: 61 KGKRGSGEISLNGAAARRAHVGDKLIICTYAPMNEEEVANYKPKIVLLGDGNRIKEIKAV 120 >aq_476 [H] COG0853 Aspartate 1-decarboxylase Aae Aquifex aeolicus Length = 124 Score = 146 bits (369), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 66/118 (55%), Positives = 89/118 (75%) Query: 1 MQRIMLRAKIHRASVTQCDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAI 60 M R ML++KIHR +VT DL+YEGS +DE L+E AD++ FEKI++YN+NNG RF TY I Sbjct: 1 MLREMLKSKIHRLTVTDADLHYEGSLSLDEYLMELADLKPFEKIDVYNINNGARFQTYVI 60 Query: 61 RGKRGSGEISLNGAAARLAHLGDLLIICTYAPMSDEEVATYKPKVVFVDDKNRITSLK 118 R SGE+ LNGAAARL H GDL+II +YA ++EE+ Y PK++FV++KN+ +K Sbjct: 61 PAPRYSGEVKLNGAAARLGHKGDLIIIASYAQYTEEELENYAPKLIFVNEKNQPVEVK 118 >DR0718 [H] COG0853 Aspartate 1-decarboxylase Dra Deinococcus radiodurans Length = 120 Score = 143 bits (361), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 67/120 (55%), Positives = 87/120 (72%) Query: 1 MQRIMLRAKIHRASVTQCDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAI 60 M+RIM RAKIHRA+VTQ DL+Y GS ID+DLL+AADI EK++++N+ NG R TYA+ Sbjct: 1 MERIMFRAKIHRATVTQADLDYVGSVTIDQDLLDAADILVNEKVDIWNITNGNRLHTYAL 60 Query: 61 RGKRGSGEISLNGAAARLAHLGDLLIICTYAPMSDEEVATYKPKVVFVDDKNRITSLKAI 120 G RGSG I +NGAAA L GD++II + S+EE T +PKVV VD KNR+ L+ + Sbjct: 61 SGPRGSGVIGINGAAAHLMRPGDMVIIAAFGNFSEEEARTLEPKVVLVDAKNRLLELQPV 120 >XF0231 [H] COG0853 Aspartate 1-decarboxylase Xfa Xylella fastidiosa 9a5c Length = 142 Score = 140 bits (353), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 63/115 (54%), Positives = 85/115 (73%) Query: 1 MQRIMLRAKIHRASVTQCDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAI 60 MQ +L+AKIHRA+V+ +LNYEGS ID LLEAA + EFEK+ ++NV NG RF+TYAI Sbjct: 17 MQLSLLKAKIHRATVSHSELNYEGSIAIDGLLLEAAGLYEFEKVHIWNVTNGARFTTYAI 76 Query: 61 RGKRGSGEISLNGAAARLAHLGDLLIICTYAPMSDEEVATYKPKVVFVDDKNRIT 115 R + GSG IS+NG AAR +GDL+I+ +A MS++E A + P +V+VD N +T Sbjct: 77 RAEHGSGIISVNGGAARYVQVGDLVIVAAFAQMSEDEAAVFSPNLVYVDAANAMT 131 >NMB1282 [H] COG0853 Aspartate 1-decarboxylase Nme Neisseria meningitidis MC58 Length = 127 Score = 137 bits (346), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 67/114 (58%), Positives = 83/114 (72%) Query: 1 MQRIMLRAKIHRASVTQCDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAI 60 M R ML KIHRA+VT+ DLNY GS +D+DLL+AA I EK+ + N NNGERF TY I Sbjct: 1 MFRTMLGGKIHRATVTEADLNYVGSITVDQDLLDAAGIYPNEKVAIVNNNNGERFETYTI 60 Query: 61 RGKRGSGEISLNGAAARLAHLGDLLIICTYAPMSDEEVATYKPKVVFVDDKNRI 114 GKRGSG I LNGAAARL GD++II +Y +S+ E+A ++PKVV VD N+I Sbjct: 61 AGKRGSGVICLNGAAARLVQKGDIVIIMSYVQLSEPEIAAHEPKVVLVDGNNKI 114 >YPO3403 [H] COG0853 Aspartate 1-decarboxylase Ype Yersinia pestis Length = 126 Score = 137 bits (344), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 65/114 (57%), Positives = 84/114 (73%) Query: 1 MQRIMLRAKIHRASVTQCDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAI 60 M R ML+ K+HR VTQ DL+YEGSC ID+D LEAA I E+E I++YNV+NG+RFSTYAI Sbjct: 1 MIRTMLQGKLHRVKVTQADLHYEGSCAIDQDFLEAAGILEYEAIDIYNVDNGQRFSTYAI 60 Query: 61 RGKRGSGEISLNGAAARLAHLGDLLIICTYAPMSDEEVATYKPKVVFVDDKNRI 114 +RGS IS+NGAAAR A +GD LIIC+Y MS + PKV + + +N++ Sbjct: 61 AAERGSRIISVNGAAARCACVGDKLIICSYVQMSYAAARLHHPKVAYFEGENQL 114 >PA4731 [H] COG0853 Aspartate 1-decarboxylase Pae Pseudomonas aeruginosa Length = 126 Score = 137 bits (344), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 61/115 (53%), Positives = 89/115 (77%) Query: 1 MQRIMLRAKIHRASVTQCDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAI 60 M IML+AK+HRA VT L+YEGSC ID D L+ + IRE+E+I++YN++NGERF+TYAI Sbjct: 1 MHAIMLKAKLHRAEVTHAVLDYEGSCAIDGDWLDLSGIREYEQIQIYNIDNGERFTTYAI 60 Query: 61 RGKRGSGEISLNGAAARLAHLGDLLIICTYAPMSDEEVATYKPKVVFVDDKNRIT 115 R + GS IS+NGAAA A +GD +IIC YA S+ E+A++KP+++++ N+++ Sbjct: 61 RAENGSKMISVNGAAAHKAKVGDRVIICAYAHYSEAELASHKPRMLYMAPGNQLS 115 >STM0180 [H] COG0853 Aspartate 1-decarboxylase Sty Salmonella typhimurium LT2 Length = 126 Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 65/121 (53%), Positives = 88/121 (72%), Gaps = 1/121 (0%) Query: 1 MQRIMLRAKIHRASVTQCDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAI 60 M R ML+ K+HR VTQ DL+YEGSC ID+D L+A+ I E E I+++NV NG+RFSTYAI Sbjct: 1 MIRTMLQGKLHRVKVTQADLHYEGSCAIDQDFLDASGILENEAIDIWNVTNGKRFSTYAI 60 Query: 61 RGKRGSGEISLNGAAARLAHLGDLLIICTYAPMSDEEVATYKPKVVFVDDKNRIT-SLKA 119 +RGS IS+NGAAA A +GD++II ++ MSDEE T++PKV + + N + + KA Sbjct: 61 AAERGSRIISVNGAAAHCAEVGDIVIIASFVTMSDEEARTWRPKVAYFEGDNEMKRTAKA 120 Query: 120 I 120 I Sbjct: 121 I 121 >NMA1492 [H] COG0853 Aspartate 1-decarboxylase NmA Neisseria meningitidis Z2491 Length = 127 Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 66/114 (57%), Positives = 82/114 (71%) Query: 1 MQRIMLRAKIHRASVTQCDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAI 60 M R ML KIHRA+VT+ DLNY GS +D+DLL+AA I EK+ + N NNGERF TY I Sbjct: 1 MFRTMLGGKIHRATVTEADLNYVGSITVDQDLLDAAGIYPNEKVAIVNNNNGERFETYTI 60 Query: 61 RGKRGSGEISLNGAAARLAHLGDLLIICTYAPMSDEEVATYKPKVVFVDDKNRI 114 GKRGSG I LNGAAARL D++II +Y +S+ E+A ++PKVV VD N+I Sbjct: 61 AGKRGSGVICLNGAAARLVQKSDIVIIMSYVQLSEPEIAAHEPKVVLVDGNNKI 114 >CAC2916 [H] COG0853 Aspartate 1-decarboxylase Cac Clostridium acetobutylicum Length = 127 Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 63/117 (53%), Positives = 85/117 (72%) Query: 1 MQRIMLRAKIHRASVTQCDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAI 60 M ML++KIHRA+V Q DLNY GS ID +L++ A+I E+EK+E+ N+NNG RF TY I Sbjct: 1 MHLNMLKSKIHRATVVQADLNYVGSITIDRNLMDKANILEYEKVEIANINNGARFETYVI 60 Query: 61 RGKRGSGEISLNGAAARLAHLGDLLIICTYAPMSDEEVATYKPKVVFVDDKNRITSL 117 G+ GSG I LNGAAAR A GD +II Y ++ EE + ++PKVVFV+D N I+++ Sbjct: 61 AGEAGSGIICLNGAAARCAQAGDKVIIMCYCSLTPEEASEHRPKVVFVNDDNSISNV 117