BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0196.p (169 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0763 [R] COG1853 Conserved protein/domain typically associate... 196 2e-50 AGpA322 [R] COG1853 Conserved protein/domain typically associate... 117 1e-26 SMa0793 [R] COG1853 Conserved protein/domain typically associate... 113 2e-25 RC0191 Non COG 112 3e-25 RSc1836 [R] COG1853 Conserved protein/domain typically associate... 112 4e-25 RP149 [R] COG1853 Conserved protein/domain typically associated ... 109 3e-24 AGl1244 [R] COG1853 Conserved protein/domain typically associate... 107 1e-23 CC2275 [R] COG1853 Conserved protein/domain typically associated... 107 1e-23 SMa0758 [R] COG1853 Conserved protein/domain typically associate... 105 4e-23 SMa0753 [R] COG1853 Conserved protein/domain typically associate... 105 5e-23 >RSc0763 [R] COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family Rso Ralstonia solanacearum Length = 191 Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 103/163 (63%), Positives = 120/163 (73%), Gaps = 6/163 (3%) Query: 7 RADARQFDAAHFRQALSQFATGVTVITTRLADGT----LLGLTASSFNSVSLDPPLVLWS 62 RA FDAAHFR+ALSQFATGVTV+TTR +G+TASSFNSVSL+PPLVLWS Sbjct: 18 RATPPDFDAAHFRRALSQFATGVTVVTTRSGGAPDQPPFVGVTASSFNSVSLEPPLVLWS 77 Query: 63 LGSKANSMPVFSGNSHYVINILSADQAHLAQQFASKMENRFEGVAYTLSRTGQPILEGAS 122 LG++ANS P+F SHYVIN+LSA Q L ++FA+ +RF V Y LS TG PIL + Sbjct: 78 LGTQANSFPLFHRGSHYVINVLSASQLDLCKRFATLKGDRFANVDYRLSPTGLPILAQSL 137 Query: 123 AWFECHNRSQYPEGDHVIFVGEVEHCEV-DPKAA-LIFHNGRF 163 AWFECHNRS+Y EGDHVIFVGEVE C V D + A L+FH G F Sbjct: 138 AWFECHNRSRYDEGDHVIFVGEVERCGVLDARGAPLVFHRGAF 180 >AGpA322 [R] COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 323 Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 62/151 (41%), Positives = 84/151 (55%) Query: 13 FDAAHFRQALSQFATGVTVITTRLADGTLLGLTASSFNSVSLDPPLVLWSLGSKANSMPV 72 D R+A F TGVT++TT ADG G+TA+SF SVSLDPPL+L +G A S Sbjct: 8 IDPIALRKAFGTFVTGVTIVTTYDADGNPRGMTANSFTSVSLDPPLLLICVGKSAASYEA 67 Query: 73 FSGNSHYVINILSADQAHLAQQFASKMENRFEGVAYTLSRTGQPILEGASAWFECHNRSQ 132 F + +N L Q ++ FASK ++F V + TG PIL + +WF+C ++ Sbjct: 68 FCQTESFAVNFLHEGQVDVSGIFASKTADKFGSVRHHRVHTGAPILADSLSWFDCTVFNR 127 Query: 133 YPEGDHVIFVGEVEHCEVDPKAALIFHNGRF 163 GDHVI +GEV P+A L F GR+ Sbjct: 128 VEAGDHVILIGEVRAFGTSPQAPLGFCRGRY 158 >SMa0793 [R] COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family Sme Sinorhizobium meliloti Length = 320 Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 59/140 (42%), Positives = 76/140 (54%) Query: 10 ARQFDAAHFRQALSQFATGVTVITTRLADGTLLGLTASSFNSVSLDPPLVLWSLGSKANS 69 A FD R A FATGVTV+T A G +G TA+SF SVSLDPPL+L L + + Sbjct: 12 AEVFDPRALRDAFGAFATGVTVVTASDAAGKPIGFTANSFTSVSLDPPLLLVCLAKSSRN 71 Query: 70 MPVFSGNSHYVINILSADQAHLAQQFASKMENRFEGVAYTLSRTGQPILEGASAWFECHN 129 + + IN+LS Q ++ FA +E+RF V + L R G PI +AWFEC Sbjct: 72 YESMTSAGRFAINVLSETQKDVSNTFARPVEDRFAAVDWRLGRDGCPIFSDVAAWFECSM 131 Query: 130 RSQYPEGDHVIFVGEVEHCE 149 + GDHVI +G V E Sbjct: 132 QDIIEAGDHVIIIGRVTAFE 151 >RC0191 Non COG Length = 159 Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 58/147 (39%), Positives = 88/147 (59%), Gaps = 4/147 (2%) Query: 16 AHFRQALSQFATGVTVITTRLADGTLLGLTASSFNSVSLDPPLVLWSLGSKANSMPVFSG 75 + F+ A+S+F GVT+ITT + L G TASS SVSL PPL+L+ L + S+ F Sbjct: 8 SQFKDAMSRFPQGVTIITTN-CNNELFGFTASSLTSVSLKPPLILFCLNKNSFSINSFQK 66 Query: 76 NSHYVINILSADQAHLAQQFASKMENRFEGVAYTL-SRTGQPILEGASAWFECHNRSQYP 134 + + I+IL+ +Q +++ FA N+F + Y L ++T P++ GA+ EC+ + Y Sbjct: 67 SDKFAISILAENQIDISKHFAKSQSNKFTKIDYELGNKTDCPLINGATYHIECNKYASYD 126 Query: 135 EGDHVIFVGEVEHCEV--DPKAALIFH 159 GDHVIF+GEV + + D K L FH Sbjct: 127 AGDHVIFIGEVINTAIKNDLKPLLYFH 153 >RSc1836 [R] COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family Rso Ralstonia solanacearum Length = 183 Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 59/152 (38%), Positives = 85/152 (55%), Gaps = 1/152 (0%) Query: 18 FRQALSQFATGVTVITTRLADGTLLGLTASSFNSVSLDPPLVLWSLGSKANSMPVFSGNS 77 R + TGV ++TTR DG +GLT +SF ++SL PPLVLWSL ++ ++ F S Sbjct: 30 LRNLFGSYPTGVAIVTTRTPDGRAVGLTINSFATLSLAPPLVLWSLVDRSPNLDAFRACS 89 Query: 78 HYVINILSADQAHLAQQFAS-KMENRFEGVAYTLSRTGQPILEGASAWFECHNRSQYPEG 136 H+ INIL+ LA++FAS + ++F+GVA + G P ++GA C + G Sbjct: 90 HFAINILANGHEALAKRFASAAVPDKFDGVALQETPEGVPAIDGAVTTLVCAHDHCRHVG 149 Query: 137 DHVIFVGEVEHCEVDPKAALIFHNGRFIKTEA 168 DH++ VG V P L+FH GRF A Sbjct: 150 DHLLLVGRVVRTANQPGTPLVFHAGRFTSLHA 181 >RP149 [R] COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family Rpr Rickettsia prowazekii Length = 161 Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 57/153 (37%), Positives = 88/153 (57%), Gaps = 4/153 (2%) Query: 10 ARQFDAAHFRQALSQFATGVTVITTRLADGTLLGLTASSFNSVSLDPPLVLWSLGSKANS 69 AR F+ A+S+F GVT+ITT + L G TASSF SVSL P L+L+ L + S Sbjct: 2 ARTITEGQFKDAMSRFPQGVTIITTN-CNNELFGFTASSFTSVSLKPSLILFCLNKNSCS 60 Query: 70 MPVFSGNSHYVINILSADQAHLAQQFASKMENRFEGVAYTL-SRTGQPILEGASAWFECH 128 + F + + ++IL+ +Q +++ FA N+F + Y L ++T P++ A+ EC+ Sbjct: 61 INSFKQSDKFAVSILAENQIDISKHFAKSQPNKFIKIGYKLGNKTDCPLINDATCHIECN 120 Query: 129 NRSQYPEGDHVIFVGEVEHCEV--DPKAALIFH 159 + Y GDHVIF+GEV + + + K L FH Sbjct: 121 KYASYNAGDHVIFIGEVINTAIKNNVKPLLYFH 153 >AGl1244 [R] COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 312 Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 74/133 (55%) Query: 13 FDAAHFRQALSQFATGVTVITTRLADGTLLGLTASSFNSVSLDPPLVLWSLGSKANSMPV 72 D R A F TGVT++TTR G +G TA+SF SVSLDPPL+L L + + Sbjct: 6 LDPRALRDAFGAFVTGVTIVTTRDDAGKPVGFTANSFTSVSLDPPLLLICLARTSRNFAT 65 Query: 73 FSGNSHYVINILSADQAHLAQQFASKMENRFEGVAYTLSRTGQPILEGASAWFECHNRSQ 132 +G ++ +NILS Q L+ FA +E+RF ++ + G P+ +AWFEC + Sbjct: 66 MTGAKNFAVNILSESQKDLSNTFARPVEDRFAAAEWSDAPQGSPVFAEVAAWFECTMQEV 125 Query: 133 YPEGDHVIFVGEV 145 GDHVI +G + Sbjct: 126 IEAGDHVILLGRI 138 >CC2275 [R] COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family Ccr Caulobacter vibrioides Length = 174 Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 65/156 (41%), Positives = 86/156 (55%), Gaps = 1/156 (0%) Query: 12 QFDAAHFRQALSQFATGVTVITTRLADGTLLGLTASSFNSVSLDPPLVLWSLGSKANSMP 71 + DA R A F TGVTV+TT DG +GLTA+SF SVSLDPPL L + K++S+P Sbjct: 14 EHDARALRNAFGCFTTGVTVVTTLAPDGRRVGLTANSFTSVSLDPPLALICVDLKSSSLP 73 Query: 72 VFSGNSHYVINILSADQAHLAQQFASKMENRFEGVAYTLSRTGQPILEGASAWFECHNRS 131 + +N+L A+ LA+QF K +RF G+ RTG PIL A FEC Sbjct: 74 ALDAAQKFAVNVLHAEHQQLARQFVQKETDRFAGLETETWRTGVPILPECMANFECETHH 133 Query: 132 QYPEGDHVIFVGEVEHCEVDPK-AALIFHNGRFIKT 166 + GDH ++VG V DP L++ GRF + Sbjct: 134 AFDAGDHRVYVGRVVKLRYDPDHEPLVYLQGRFRRV 169 >SMa0758 [R] COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family Sme Sinorhizobium meliloti Length = 200 Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 56/136 (41%), Positives = 72/136 (52%) Query: 10 ARQFDAAHFRQALSQFATGVTVITTRLADGTLLGLTASSFNSVSLDPPLVLWSLGSKANS 69 A FDA R+A F T VT IT G +G TA+SF SVSLDPPL+L + A Sbjct: 12 ADVFDARALREAFGAFPTAVTAITASDPAGRPVGFTANSFTSVSLDPPLLLVCVAKTARD 71 Query: 70 MPVFSGNSHYVINILSADQAHLAQQFASKMENRFEGVAYTLSRTGQPILEGASAWFECHN 129 + H+ INILS Q ++ +FA +E+RF V + + G PI +AWFEC Sbjct: 72 YSTMTAAEHFAINILSEAQKDVSIKFARPLEDRFAAVDWARAPNGCPIFAQVAAWFECSM 131 Query: 130 RSQYPEGDHVIFVGEV 145 GDHV+ VG V Sbjct: 132 HDVIEAGDHVMMVGRV 147 >SMa0753 [R] COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family Sme Sinorhizobium meliloti Length = 230 Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 56/136 (41%), Positives = 72/136 (52%) Query: 10 ARQFDAAHFRQALSQFATGVTVITTRLADGTLLGLTASSFNSVSLDPPLVLWSLGSKANS 69 A FD R+A F T VTVIT G +G TA+SF SVSLDPPL+L + A Sbjct: 3 ADVFDPRALREAFGAFPTAVTVITASDPAGRPVGFTANSFTSVSLDPPLLLVCVAKTARD 62 Query: 70 MPVFSGNSHYVINILSADQAHLAQQFASKMENRFEGVAYTLSRTGQPILEGASAWFECHN 129 + H+ INILS Q ++ +FA +E+RF V + + G PI +AWFEC Sbjct: 63 YSTMTAAEHFAINILSEAQKDVSIKFARPLEDRFAAVDWARAPNGCPIFAQVAAWFECSM 122 Query: 130 RSQYPEGDHVIFVGEV 145 GDHV+ VG V Sbjct: 123 HDVIEAGDHVMMVGRV 138