BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0172.p (542 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value VC1651_1 [T] COG0784 FOG Vch Vibrio cholerae 88 5e-17 YPO1680 [T] COG0784 FOG Ype Yersinia pestis 77 1e-13 cheY [T] COG0784 FOG Eco Escherichia coli K12 75 3e-13 ZcheY [T] COG0784 FOG EcZ Escherichia coli O157:H7 EDL933 75 3e-13 ECs2592 [T] COG0784 FOG Ecs Escherichia coli O157:H7 75 3e-13 RSc0741 [T] COG0784 FOG Rso Ralstonia solanacearum 75 3e-13 STM1916 [T] COG0784 FOG Sty Salmonella typhimurium LT2 75 5e-13 RSp1402 [T] COG0784 FOG Rso Ralstonia solanacearum 75 6e-13 PA1456 [T] COG0784 FOG Pae Pseudomonas aeruginosa 68 7e-11 CC0591 [T] COG0784 FOG Ccr Caulobacter vibrioides 65 5e-10 >VC1651_1 [T] COG0784 FOG Vch Vibrio cholerae Length = 168 Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 45/154 (29%), Positives = 82/154 (53%), Gaps = 2/154 (1%) Query: 9 ISALRSLIIDDMPTMRQNIRMHLGQLGVTK--VDQAATPDEAIRFVQSGNYDLIICDYNL 66 + L+ LIIDD P + ++R L +LG T+ + + +P A+ +D+ ICDYN Sbjct: 6 FAELKVLIIDDAPIVIASLRSMLLKLGFTEPNIVWSKSPRAAVFMAGRQRFDIFICDYNF 65 Query: 67 NKESNGQQLLEFFRTQNMLSPTCMFIMVTAESGYNLVASAAEFQPDAYMLKPLTASRIAE 126 K NG+Q+ E + ++ +F++VT E+ +V S E +PD Y+LKP + E Sbjct: 66 GKGLNGKQVFEELKHYKLIKQDAVFVLVTGENSAYVVHSILELKPDEYILKPFNIMTLQE 125 Query: 127 RVDRLLEKQHAMLPVTEKMKRKDISGAIAECDNV 160 R+ + ++HA+ + + + D ++ CD + Sbjct: 126 RLTNAISRKHALKALYQAERDGDAELGLSLCDEL 159 >YPO1680 [T] COG0784 FOG Ype Yersinia pestis Length = 129 Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 75/123 (60%), Gaps = 2/123 (1%) Query: 12 LRSLIIDDMPTMRQNIRMHLGQLGVTKVDQAATPDEAIRFVQSGNYDLIICDYNLNKESN 71 LR L++DD TMR+ +R L +LG V++A +A+ +++G +D ++ D+N+ + Sbjct: 6 LRFLVVDDFSTMRRIVRNLLKELGFHNVEEAEDGVDALNKLRAGGFDFVVSDWNM-PNMD 64 Query: 72 GQQLLEFFRTQNMLSPTCMFIMVTAESGYNLVASAAEFQPDAYMLKPLTASRIAERVDRL 131 G LL+ RT L+ T +MVTAE+ + +AA+ Y++KP TA+ + E+++++ Sbjct: 65 GLDLLKTIRTDGALA-TLPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKI 123 Query: 132 LEK 134 EK Sbjct: 124 FEK 126 >cheY [T] COG0784 FOG Eco Escherichia coli K12 Length = 129 Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 74/123 (60%), Gaps = 2/123 (1%) Query: 12 LRSLIIDDMPTMRQNIRMHLGQLGVTKVDQAATPDEAIRFVQSGNYDLIICDYNLNKESN 71 L+ L++DD TMR+ +R L +LG V++A +A+ +Q+G Y +I D+N+ + Sbjct: 6 LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWNM-PNMD 64 Query: 72 GQQLLEFFRTQNMLSPTCMFIMVTAESGYNLVASAAEFQPDAYMLKPLTASRIAERVDRL 131 G +LL+ R +S + +MVTAE+ + +AA+ Y++KP TA+ + E+++++ Sbjct: 65 GLELLKTIRADGAMSALPV-LMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKI 123 Query: 132 LEK 134 EK Sbjct: 124 FEK 126 >ZcheY [T] COG0784 FOG EcZ Escherichia coli O157:H7 EDL933 Length = 129 Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 74/123 (60%), Gaps = 2/123 (1%) Query: 12 LRSLIIDDMPTMRQNIRMHLGQLGVTKVDQAATPDEAIRFVQSGNYDLIICDYNLNKESN 71 L+ L++DD TMR+ +R L +LG V++A +A+ +Q+G Y +I D+N+ + Sbjct: 6 LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWNM-PNMD 64 Query: 72 GQQLLEFFRTQNMLSPTCMFIMVTAESGYNLVASAAEFQPDAYMLKPLTASRIAERVDRL 131 G +LL+ R +S + +MVTAE+ + +AA+ Y++KP TA+ + E+++++ Sbjct: 65 GLELLKTIRADGAMSALPV-LMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKI 123 Query: 132 LEK 134 EK Sbjct: 124 FEK 126 >ECs2592 [T] COG0784 FOG Ecs Escherichia coli O157:H7 Length = 129 Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 74/123 (60%), Gaps = 2/123 (1%) Query: 12 LRSLIIDDMPTMRQNIRMHLGQLGVTKVDQAATPDEAIRFVQSGNYDLIICDYNLNKESN 71 L+ L++DD TMR+ +R L +LG V++A +A+ +Q+G Y +I D+N+ + Sbjct: 6 LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWNM-PNMD 64 Query: 72 GQQLLEFFRTQNMLSPTCMFIMVTAESGYNLVASAAEFQPDAYMLKPLTASRIAERVDRL 131 G +LL+ R +S + +MVTAE+ + +AA+ Y++KP TA+ + E+++++ Sbjct: 65 GLELLKTIRADGAMSALPV-LMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKI 123 Query: 132 LEK 134 EK Sbjct: 124 FEK 126 >RSc0741 [T] COG0784 FOG Rso Ralstonia solanacearum Length = 134 Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 2/126 (1%) Query: 10 SALRSLIIDDMPTMRQNIRMHLGQLGVTKVDQAATPDEAIRFVQSGNYDLIICDYNLNKE 69 S R L++DD PTMR+ IR L +LG +D+A + ++ +D +I D+N+ K Sbjct: 4 SQYRFLVVDDFPTMRRIIRGQLKELGFANIDEAEDGTAGLSKIKESRFDFVISDWNMPK- 62 Query: 70 SNGQQLLEFFRTQ-NMLSPTCMFIMVTAESGYNLVASAAEFQPDAYMLKPLTASRIAERV 128 +G Q+L+ R N ++VTAE+ V +AA+ Y++KP TA+ + E++ Sbjct: 63 MDGLQMLQAIRADPNPGISKLPVLIVTAEAKKENVIAAAQAGASGYVVKPFTAATLGEKL 122 Query: 129 DRLLEK 134 +++ EK Sbjct: 123 NKIFEK 128 >STM1916 [T] COG0784 FOG Sty Salmonella typhimurium LT2 Length = 129 Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 75/123 (60%), Gaps = 2/123 (1%) Query: 12 LRSLIIDDMPTMRQNIRMHLGQLGVTKVDQAATPDEAIRFVQSGNYDLIICDYNLNKESN 71 L+ L++DD TMR+ +R L +LG V++A +A+ +Q+G + II D+N+ + Sbjct: 6 LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGFGFIISDWNM-PNMD 64 Query: 72 GQQLLEFFRTQNMLSPTCMFIMVTAESGYNLVASAAEFQPDAYMLKPLTASRIAERVDRL 131 G +LL+ R + +S + +MVTAE+ + +AA+ Y++KP TA+ + E+++++ Sbjct: 65 GLELLKTIRADSAMSALPV-LMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKI 123 Query: 132 LEK 134 EK Sbjct: 124 FEK 126 >RSp1402 [T] COG0784 FOG Rso Ralstonia solanacearum Length = 133 Score = 74.7 bits (182), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 2/126 (1%) Query: 10 SALRSLIIDDMPTMRQNIRMHLGQLGVTKVDQAATPDEAIRFVQSGNYDLIICDYNLNKE 69 S R L++DD PTMR+ +R L +LG VD+A + V+ G +D +I D+N+ Sbjct: 4 SQYRFLVVDDFPTMRRIVRNLLKELGFANVDEAEDGAAGLAKVKEGRFDFVISDWNM-PN 62 Query: 70 SNGQQLLEFFRTQ-NMLSPTCMFIMVTAESGYNLVASAAEFQPDAYMLKPLTASRIAERV 128 +G Q+L+ R N +MVTAE+ + +AA+ + Y++KP TA+ + E++ Sbjct: 63 MDGLQMLQGIRADPNPGINKLPVLMVTAEAKKENIIAAAQAGANGYVVKPFTAATLDEKL 122 Query: 129 DRLLEK 134 ++ EK Sbjct: 123 GKIFEK 128 >PA1456 [T] COG0784 FOG Pae Pseudomonas aeruginosa Length = 124 Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 69/123 (56%), Gaps = 2/123 (1%) Query: 12 LRSLIIDDMPTMRQNIRMHLGQLGVTKVDQAATPDEAIRFVQSGNYDLIICDYNLNKESN 71 ++ LI+DD TMR+ I+ L LG T +A A+ + SGN+D ++ D+N+ + Sbjct: 1 MKILIVDDFSTMRRIIKNLLRDLGFTNTAEADDGTTALPMLHSGNFDFLVTDWNMPGMT- 59 Query: 72 GQQLLEFFRTQNMLSPTCMFIMVTAESGYNLVASAAEFQPDAYMLKPLTASRIAERVDRL 131 G LL R L + +MVTAE+ + + AA+ + Y++KP TA + E+++++ Sbjct: 60 GIDLLRAVRADERLKHLPV-LMVTAEAKRDQIIEAAQAGVNGYVVKPFTAQVLKEKIEKI 118 Query: 132 LEK 134 E+ Sbjct: 119 FER 121 >CC0591 [T] COG0784 FOG Ccr Caulobacter vibrioides Length = 127 Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 67/114 (58%), Gaps = 2/114 (1%) Query: 15 LIIDDMPTMRQNIRMHLGQLGVTKVDQAATPDEAIRFVQSGNYDLIICDYNLNKESNGQQ 74 L++DD T + + L QLG T +D+A +EA+R +++ +Y L+I D+N+ + G + Sbjct: 9 LVVDDYKTTIKIVHGLLRQLGFTNLDEAENGEEALRKLRTQSYQLVISDWNM-EPMTGIE 67 Query: 75 LLEFFRTQNMLSPTCMFIMVTAESGYNLVASAAEFQPDAYMLKPLTASRIAERV 128 LL R + L T FIM+TAES V +A + + Y++KP +A + +++ Sbjct: 68 LLRSVRADSALRATP-FIMITAESKVENVVAAKQAGANNYIVKPFSAEALKQKI 120