BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0140.p (587 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value VCA0906 [NT] COG0840 Methyl-accepting chemotaxis protein Vch Vib... 228 3e-59 RSc2799 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 221 3e-57 RSc3412 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 217 5e-56 RSp1099 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 213 8e-55 VCA1092_2 [NT] COG0840 Methyl-accepting chemotaxis protein Vch V... 208 3e-53 BB0681 Non COG 207 6e-53 RSc1460 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 207 6e-53 RSp1363 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 206 1e-52 RSc1155 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 200 8e-51 tsr [NT] COG0840 Methyl-accepting chemotaxis protein Eco Escheri... 189 1e-47 >VCA0906 [NT] COG0840 Methyl-accepting chemotaxis protein Vch Vibrio cholerae Length = 578 Score = 228 bits (581), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 178/548 (32%), Positives = 287/548 (52%), Gaps = 42/548 (7%) Query: 2 SIKQLFIWLALVLSILVAVVVSLTGALKDANLELERAHQSRYDSTALANELRRTAEDMTK 61 ++K +F + + ++I +A V L + +++R RY S A+ELR++++D+T+ Sbjct: 6 TMKLVFSAIGVGMAITMATVFQLDSLEQ----QVDRLSLIRYQSYQAADELRQSSDDLTR 61 Query: 62 FARAYVTTGDPNDEDRYYMIMDIRNGKRARPSNYDRFNWDLVNARKLALDPGAPGVPLGE 121 R YV TGD E Y I+DIRNGK+ RP +Y WDLV P + L + Sbjct: 62 LGRTYVVTGDEKYEKMYMDILDIRNGKKPRPESYHTIYWDLVLQYGQKPKPDGQTIALQQ 121 Query: 122 LMKRAGFTDEELAKMQEALKLGDQLAKIEITAFHAVKGEFDDGEGKYTVIGAPNQAMAQE 181 +MK GF+D E A ++EA D L +E+ A +AVKG F D G YTV G P+ MA + Sbjct: 122 MMKDLGFSDREFALLKEAQNNSDALVNMEVKAMNAVKGLFPDASGNYTVKGEPDVNMAVQ 181 Query: 182 LVFDQTYRTLFGKLMSPVNDFLRLVDERTQANVRQAGKDYAELEQKIFWLLAASVVVLFA 241 L+ + Y K+M+P++ F + ++ RT QA AE + + S+VV+ Sbjct: 182 LLHSEEYHREKAKIMAPIDRFFQELETRTAQQFNQA----AEQVKSTVLIGNISLVVVAI 237 Query: 242 CLWLSYRIIRSQIGGEPRDAM-SVLRRVAEG-DLTVVVPLPKGDKLSVLYST-QQMINKW 298 + Y ++ +I P D M SVL+R + DLT+ V D+L+V+ T +++ + Sbjct: 238 IAIIGYVVVNRKIVT-PIDRMASVLQRADDNSDLTLRVEEKSDDELAVIGRTINKVLGSY 296 Query: 299 TDVIGDVSGTATSLASASEQISSSSQALSHNAAQQAANVEETSASVEEIT---ATIAQNA 355 I ++ +++S S+ I S + ++QQ +E + ++EE+T ++++Q+ Sbjct: 297 GSTISKINQVNHTISSISDTIRSITDQNMKMSSQQDQELEMAATAMEEMTSALSSVSQST 356 Query: 356 DNARTTDGIASLSASAATEGGE-AVRE----------TVAAMKQIASK-------IGIID 397 + A G A A+ + + E +RE T ++Q+A++ + +I Sbjct: 357 NMAEEYAGSAEKEANNSKQVFEKTIREFADLDGEFQKTSEIIQQLATESNNVGNVLDVIK 416 Query: 398 DIAYQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSQSAAQEIIAVAETSVG-LA 456 IA QTNLLALNAAIEAARAGE G+GFAVVA EVR LA+R+Q + EI ET + L Sbjct: 417 AIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQESTGEI----ETMISMLQ 472 Query: 457 EKAGGLLNQMVPSIRKTADLVQEIAAASHEQSTGLEQINNAVHQMAQTTQMTASASEELS 516 EKA +IR +AD +Q + L I + ++ + A+A+EE Sbjct: 473 EKA----EMSTKTIRVSADKMQSTRGNMGVANESLVAIQGSAKEIHKLNTSIAAATEEQL 528 Query: 517 ATSEEMSA 524 S+E+S+ Sbjct: 529 TVSDEISS 536 >RSc2799 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 515 Score = 221 bits (564), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 132/310 (42%), Positives = 203/310 (65%), Gaps = 14/310 (4%) Query: 242 CLWLSYRIIRSQIGGEPRDAMSVLRRVAEGDLTVVVPLPKGDKLSVLYSTQQMINKWTDV 301 ++L R ++ +GGEP A + RR+A+GDL V V D+ S+L++ +M + T Sbjct: 204 AMFLIIRNVQRGLGGEPAYATEIARRIADGDLAVRVQTRPDDRNSMLFAMARMQQQLTGT 263 Query: 302 IGDVSGTATSLASASEQISSSSQALSHNAAQQAANVEETSASVEEITATIAQNADNARTT 361 IG + +A S+ASA++QI++ + LS +QA+++EET++S+EE+T+ + QNADNAR Sbjct: 264 IGHIKTSADSIASATQQIATGNADLSQRTEEQASSLEETASSMEELTSIVKQNADNARQA 323 Query: 362 DGIASLSASAATEGGEAVRETVAAM-------KQIASKIGIIDDIAYQTNLLALNAAIEA 414 +A ++ A +GGE V V M K+IA IG+I+ IA+QTN+LALNAA+EA Sbjct: 324 STLAVNASDIAVKGGEVVGRVVDTMAGINDSSKKIADIIGVIEGIAFQTNILALNAAVEA 383 Query: 415 ARAGEHGKGFAVVAAEVRKLAERSQSAAQEIIAVAETSVG-------LAEKAGGLLNQMV 467 ARAGE G+GFAVVA EVR LA+RS AA+EI + SVG L +AG +++++V Sbjct: 384 ARAGEQGRGFAVVAGEVRSLAQRSAGAAKEIKVLISDSVGRVENGTTLVAEAGTVIDEVV 443 Query: 468 PSIRKTADLVQEIAAASHEQSTGLEQINNAVHQMAQTTQMTASASEELSATSEEMSAQAI 527 ++++ D++ EI+AAS EQS+G+EQ+N AV+QM + TQ A+ EE +A + + QA Sbjct: 444 VAVKRVTDIMGEISAASDEQSSGIEQVNQAVNQMDEVTQQNAALVEEAAAAALSLEEQAT 503 Query: 528 HLQDLMRFFQ 537 L+D + F+ Sbjct: 504 LLRDAVASFR 513 >RSc3412 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 515 Score = 217 bits (553), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 127/298 (42%), Positives = 194/298 (65%), Gaps = 14/298 (4%) Query: 255 GGEPRDAMSVLRRVAEGDLTVVVPLPKGDKLSVLYSTQQMINKWTDVIGDVSGTATSLAS 314 GGEP A + +A+GDL+ V+ + D+ S+L ++M + ++ V A S+A+ Sbjct: 216 GGEPSVAAQAVSAMAQGDLSRVIAVDADDRTSLLAKLKEMQASLSGIVATVRNNAESVAT 275 Query: 315 ASEQISSSSQALSHNAAQQAANVEETSASVEEITATIAQNADNARTTDGIASLSASAATE 374 AS QI+ +Q LSH QQA+ ++ETSA+++E+ +T+ NA+NAR + +AS ++S A E Sbjct: 276 ASAQIAQGNQDLSHRTEQQASALQETSATMDELGSTVGNNAENARQANQLASGASSVAAE 335 Query: 375 GGEAVRETVAAMK-------QIASKIGIIDDIAYQTNLLALNAAIEAARAGEHGKGFAVV 427 GGE V + V MK +IA IG+ID IA+QTN+LALNAA+EAARAGE G+GFAVV Sbjct: 336 GGEVVSQVVGMMKGINDGSKKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVV 395 Query: 428 AAEVRKLAERSQSAAQEIIAVAETSV-------GLAEKAGGLLNQMVPSIRKTADLVQEI 480 AAEVR LA+RS +AA+EI A+ +SV L ++AG + Q+V +I++ +++V EI Sbjct: 396 AAEVRSLAQRSAAAAKEIKALITSSVEQVEQGTTLVDRAGATMEQIVGAIQRVSNIVAEI 455 Query: 481 AAASHEQSTGLEQINNAVHQMAQTTQMTASASEELSATSEEMSAQAIHLQDLMRFFQV 538 ++AS EQS+G+ Q+ AV QM + TQ A+ E+ +A + + QA L + F++ Sbjct: 456 SSASAEQSSGVSQVGQAVSQMDEATQQNAALVEQSAAAASSLQGQAQQLVQAVAVFKL 513 >RSp1099 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 513 Score = 213 bits (543), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 133/305 (43%), Positives = 200/305 (65%), Gaps = 14/305 (4%) Query: 248 RIIRSQIGGEPRDAMSVLRRVAEGDLTVVVPLPKGDKLSVLYSTQQMINKWTDVIGDVSG 307 R ++ Q+GG+P A + R+A GDL + V GD+ SVL++ QM + T I + Sbjct: 209 RGLQRQLGGDPAYAADIAARIAAGDLAMRVETRPGDRDSVLFAMAQMQRELTGTISHIKH 268 Query: 308 TATSLASASEQISSSSQALSHNAAQQAANVEETSASVEEITATIAQNADNARTTDGIASL 367 +A S+ASA++QI++ + LS QQA+++EET++S+EE+T+ + QNADNAR +A Sbjct: 269 SADSIASATQQIAAGNADLSQRTEQQASSLEETASSMEELTSIVKQNADNARQASTLAVN 328 Query: 368 SASAATEGGEAVRETVAAM-------KQIASKIGIIDDIAYQTNLLALNAAIEAARAGEH 420 ++ A +GGE V V M K+IA IG+I+ IA+QTN+LALNAA+EAARAGE Sbjct: 329 ASDVAVKGGEVVGRVVETMAGINDSSKKIADIIGVIEGIAFQTNILALNAAVEAARAGEQ 388 Query: 421 GKGFAVVAAEVRKLAERSQSAAQEIIAVAETSVG-------LAEKAGGLLNQMVPSIRKT 473 G+GFAVVA EVR LA+RS AA+EI + SVG L E+AG +++++V ++++ Sbjct: 389 GRGFAVVAGEVRSLAQRSAGAAKEIKELIGDSVGRVRNGTALVEEAGAVIDEVVVAVKRV 448 Query: 474 ADLVQEIAAASHEQSTGLEQINNAVHQMAQTTQMTASASEELSATSEEMSAQAIHLQDLM 533 D++ EI+AAS EQS+G+EQ+N AV+QM Q TQ A+ E+ +A + + QA L+ + Sbjct: 449 TDIMGEISAASAEQSSGIEQVNQAVNQMDQVTQQNAALVEQAAAAALSLEEQAQVLRTAV 508 Query: 534 RFFQV 538 FQ+ Sbjct: 509 GRFQM 513 >VCA1092_2 [NT] COG0840 Methyl-accepting chemotaxis protein Vch Vibrio cholerae Length = 412 Score = 208 bits (529), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 131/315 (41%), Positives = 195/315 (61%), Gaps = 23/315 (7%) Query: 261 AMSVLRRVAEGDL-TVVVPLPKGDKLSVLYSTQQMINKWTDVIGDVSGTATSLASASEQI 319 ++V+ RVAEGDL T + +G+ + + I +++ ++ ++ +A+AS +I Sbjct: 69 CITVMSRVAEGDLNTSMSEEYQGEFGRLASAVNASIVNLRNMVDKITVSSARVATASTEI 128 Query: 320 SSSSQALSHNAAQQAANVEETSASVEEITATIAQNADNARTTDGIASLSASAATEGGEAV 379 + + LS QA+N+EET+AS+EEITAT+ QNADNA+ + +A+ +A A GGE V Sbjct: 129 ADGNNDLSQRVEAQASNLEETAASMEEITATVRQNADNAKDANLLATDAAKKAARGGEVV 188 Query: 380 RETVAAM-------KQIASKIGIIDDIAYQTNLLALNAAIEAARAGEHGKGFAVVAAEVR 432 E ++AM K+IA I +ID+IA+QTNLLALNAA+EAARAGE G+GFAVVA EVR Sbjct: 189 GEAISAMGAINTASKKIADIISVIDEIAFQTNLLALNAAVEAARAGEQGRGFAVVAGEVR 248 Query: 433 KLAERSQSAAQEIIAVAETSVG-------LAEKAGGLLNQMVPSIRKTADLVQEIAAASH 485 LA+RS AA+EI + SV L ++G L ++V ++ + +DL+ +IAA+S Sbjct: 249 NLAQRSAGAAKEIKGLINDSVDKVNEGSRLVNESGSTLKEIVEAVVRVSDLIAQIAASSV 308 Query: 486 EQSTGLEQINNAVHQMAQTTQMTASASEELSATSEEMSAQAIHLQDLMRFFQVG------ 539 EQSTG+++IN A+ M + TQ AS EE SA S+ + + L +LM FF Sbjct: 309 EQSTGIDEINRAIAAMDEMTQQNASLVEETSAASQSLKDEGKELLNLMNFFVTENNVTTF 368 Query: 540 --EPRKSAPRASKAV 552 +PR+S P +K V Sbjct: 369 ERKPRQSTPPKTKPV 383 >BB0681 Non COG Length = 636 Score = 207 bits (527), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 125/329 (37%), Positives = 198/329 (60%), Gaps = 5/329 (1%) Query: 214 VRQAGKDYAELEQKIFWLLAASVVVLFACLWLSYRIIRSQIGGEPRDAMSVLRRVAEGDL 273 +R + D+ + + +LA S V L ++ + ++ + R+A G+ Sbjct: 307 MRTSEDDFYYMSRATTIILAISFVFTLLMLAIATLYLVKKLSSSLNKILEYSERLASGNF 366 Query: 274 TVVVPLPKGDKLSVLYST----QQMINKWTDVIGDVSGTATSLASASEQISSSSQALSHN 329 T + K D + LYS +Q+ ++ V V L + QI+++SQ LS Sbjct: 367 TADINFGKWDTVE-LYSLYEGLEQLRTNFSSVAKGVIENLDYLYENAIQIANASQNLSSG 425 Query: 330 AAQQAANVEETSASVEEITATIAQNADNARTTDGIASLSASAATEGGEAVRETVAAMKQI 389 A +QA+ +E+ +A++E+I+ +++N +NA TT+ IA + EG ++V + + AM I Sbjct: 426 AVEQASTLEQMTANIEQISQGVSENTENAATTEKIAVNTNERTKEGHKSVVKAIEAMTVI 485 Query: 390 ASKIGIIDDIAYQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSQSAAQEIIAVA 449 KIGIID+I QTNLLALNA+IEAAR GE GKGF VVAAEVRKLA++S+ +A+EII +A Sbjct: 486 TEKIGIIDEITRQTNLLALNASIEAARVGEKGKGFEVVAAEVRKLADQSKESAREIIDIA 545 Query: 450 ETSVGLAEKAGGLLNQMVPSIRKTADLVQEIAAASHEQSTGLEQINNAVHQMAQTTQMTA 509 S+ +A +AG Q+VP + +TA LV+ I+ S++QS +EQ NA+ Q++Q Q TA Sbjct: 546 NRSLTVASRAGENFEQIVPGMEQTARLVKNISNESYKQSVQIEQFKNAIEQVSQLVQTTA 605 Query: 510 SASEELSATSEEMSAQAIHLQDLMRFFQV 538 S+SEELSA SE+M L++ + +F++ Sbjct: 606 SSSEELSAMSEKMLESVKDLKESVDYFKI 634 >RSc1460 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 513 Score = 207 bits (527), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 127/313 (40%), Positives = 199/313 (63%), Gaps = 21/313 (6%) Query: 210 TQANVRQAGKDYAELEQKIFWLLAASVVVLFACLWLSYRIIRSQIGGEPRDA-MSVLRRV 268 ++AN + + YA + + + ++VV C WL ++R+ +G P +A ++ R+ Sbjct: 173 SKANFDDSQQAYARIRNLVIAAIVLALVVSAGCAWL---LLRAIVG--PLNATLAQFDRI 227 Query: 269 AEGDLTVVVPLPKGDKLS-VLYSTQQMINKWTDVIGDVSGTATSLASASEQISSSSQALS 327 A GDLT V + + D++ +L +M TD + V + S+ +A++QI++ + LS Sbjct: 228 AAGDLTQPVRIDRRDEMGHLLEGLARMQAALTDTVRRVRHGSESIGAATKQIAAGNADLS 287 Query: 328 HNAAQQAANVEETSASVEEITATIAQNADNARTTDGIASLSASAATEGGEAVRETVAAMK 387 QA+++EET++S+EE+T+ + QNADNAR +A +++ A++GG V + VA M+ Sbjct: 288 QRTEGQASSLEETASSMEEMTSIVRQNADNARQASQLADSASAVASQGGAVVTDVVATMR 347 Query: 388 QIASK-------IGIIDDIAYQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSQS 440 +I++ IG+ID IA+QTN+LALNAA+EAARAGE G+GFAVVA EVR LA+RS + Sbjct: 348 EISASSRTVSEIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAA 407 Query: 441 AAQEI-------IAVAETSVGLAEKAGGLLNQMVPSIRKTADLVQEIAAASHEQSTGLEQ 493 AA+EI +A +T LAE+AG + +V SIR+ D++ EIAAAS EQS+G+EQ Sbjct: 408 AAKEIKEMIEASLAKVDTGSKLAEQAGSTMENIVTSIRRVTDIMGEIAAASSEQSSGIEQ 467 Query: 494 INNAVHQMAQTTQ 506 +N AV M + TQ Sbjct: 468 VNKAVTLMDEATQ 480 >RSp1363 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 543 Score = 206 bits (524), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 142/386 (36%), Positives = 222/386 (57%), Gaps = 23/386 (5%) Query: 186 QTYRTLFGKLMSPVND-FLRLVDERTQANVRQAGKDYAEL-----EQKIFWLLAASVVVL 239 Q R L+ MS + D + LVD+ + D +E KI ++ A + L Sbjct: 142 QEARALYQGDMSRLQDRYYVLVDKMVDHQAGEMEHDVSEAAAQGANAKIQMIVLAVLATL 201 Query: 240 FACLWLSYRIIRSQIGGEPRDAMSVLRRVAEGDLTVVVPLPKGDKLS-VLYSTQQMINKW 298 A ++ I I AM + VA+G+LT ++ + D++ +L + + MI Sbjct: 202 LAIATGAF--ITRTITRPINHAMHLAEAVAQGNLTHLLEVDTQDEIGRLLAALKHMIENL 259 Query: 299 TDVIGDVSGTATSLASASEQISSSSQALSHNAAQQAANVEETSASVEEITATIAQNADNA 358 ++ V G ++ AS +++S + LS QQA+++EET+A++E++T+T+ QNADNA Sbjct: 260 HGIVSQVRGGTDTITRASSEVASGNIDLSSRTEQQASSLEETAAAMEQLTSTVKQNADNA 319 Query: 359 RTTDGIASLSASAATEGGEAVRETVAAM-------KQIASKIGIIDDIAYQTNLLALNAA 411 + +AS ++ AT+GG+AV E + M ++I IG+ID IA+QTN+LALNAA Sbjct: 320 QEASRLASNASMVATKGGDAVDEAIQTMSTINTSSRKIVDIIGVIDGIAFQTNILALNAA 379 Query: 412 IEAARAGEHGKGFAVVAAEVRKLAERSQSAAQEIIAVAETSVGL-------AEKAGGLLN 464 +EAARAGE G+GFAVVA EVR LA+RS +AA+EI A+ E SVG E+AG ++ Sbjct: 380 VEAARAGEQGRGFAVVAGEVRSLAQRSAAAAKEIKALIEDSVGHVSTGTAKVEEAGQIIR 439 Query: 465 QMVPSIRKTADLVQEIAAASHEQSTGLEQINNAVHQMAQTTQMTASASEELSATSEEMSA 524 +V I+ ++V EI+A+S EQS G+EQIN A+ QM + TQ AS EE + ++ + Sbjct: 440 DVVAGIQNVTNIVSEISASSREQSDGIEQINEAITQMDKATQENASLVEESATAAQALQD 499 Query: 525 QAIHLQDLMRFFQVGEPRKSAPRASK 550 QA L D++ F++ RA++ Sbjct: 500 QANQLADMVSTFKLHADLSGRGRAAQ 525 >RSc1155 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 629 Score = 200 bits (509), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 114/273 (41%), Positives = 175/273 (64%), Gaps = 14/273 (5%) Query: 248 RIIRSQIGGEPRDAMSVLRRVAEGDLTVVVPLPKGDKLSVLYSTQQMINKWTDVIGDVSG 307 R ++ +GG+P A V R+A GDL+V + D+ S+LY+ +M IG + G Sbjct: 216 RGLQRALGGDPAYAAEVANRIAGGDLSVEIATRPDDRDSLLYAMGRMRGALVQTIGRIRG 275 Query: 308 TATSLASASEQISSSSQALSHNAAQQAANVEETSASVEEITATIAQNADNARTTDGIASL 367 + ++ +A+ +I+S + LS QQA+++EET++++EE+ +T+ QNADNA + +A Sbjct: 276 ASETIGTATREIASGNLDLSSRTEQQASSLEETASAMEELMSTVQQNADNANQANQLAVS 335 Query: 368 SASAATEGGEAVRETVAAM-------KQIASKIGIIDDIAYQTNLLALNAAIEAARAGEH 420 ++ A GG+ V V M ++I IG+ID IA+QTN+LALNAA+EAARAGE Sbjct: 336 ASDVAVRGGDVVSRVVETMGSINASSRKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQ 395 Query: 421 GKGFAVVAAEVRKLAERSQSAAQEIIAVAETSV-------GLAEKAGGLLNQMVPSIRKT 473 G+GFAVVA EVR LA+RS +AA+EI A+ + SV L E+AG + ++V S+R+ Sbjct: 396 GRGFAVVAGEVRSLAQRSAAAAKEIKALIDDSVTNVDAGSALVEEAGTTMREIVASVRRV 455 Query: 474 ADLVQEIAAASHEQSTGLEQINNAVHQMAQTTQ 506 D+V EI AAS EQ +G+E++++AV Q+ TQ Sbjct: 456 TDIVGEITAASQEQRSGIEEVSHAVTQLDDATQ 488 >tsr [NT] COG0840 Methyl-accepting chemotaxis protein Eco Escherichia coli K12 Length = 551 Score = 189 bits (481), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 128/363 (35%), Positives = 210/363 (57%), Gaps = 24/363 (6%) Query: 229 FWLLAASVVVLFACLWLSYRIIRSQIGGEPRDAMSVLRRVAEGDLTVVVPLPKGDKLSVL 288 W+L ++V+ A ++ + I++ + + +R +A GDL + + +++ L Sbjct: 193 MWILVGVMIVVLAVIFAVWFGIKASLVAPMNRLIDSIRHIAGGDLVKPIEVDGSNEMGQL 252 Query: 289 Y-STQQMINKWTDVIGDVSGTATSLASASEQISSSSQALSHNAAQQAANVEETSASVEEI 347 S + M + +GDV A ++ S + +I++ + LS QQAA++EET+AS+E++ Sbjct: 253 AESLRHMQGELMRTVGDVRNGANAIYSGASEIATGNNDLSSRTEQQAASLEETAASMEQL 312 Query: 348 TATIAQNADNARTTDGIASLSASAATEGGEAVRETVAAMK-------QIASKIGIIDDIA 400 TAT+ QNA+NAR +A ++ A GG+ V V M+ +IA I +ID IA Sbjct: 313 TATVKQNAENARQASHLALSASETAQRGGKVVDNVVQTMRDISTSSQKIADIISVIDGIA 372 Query: 401 YQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSQSAAQEIIAVAETSVG------ 454 +QTN+LALNAA+EAARAGE G+GFAVVA EVR LA+RS AA+EI ++ E SVG Sbjct: 373 FQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAREIKSLIEDSVGKVDVGS 432 Query: 455 -LAEKAGGLLNQMVPSIRKTADLVQEIAAASHEQSTGLEQINNAVHQMAQTTQMTASASE 513 L E AG + ++V ++ + D++ EIA+AS EQS G++Q+ AV +M + TQ A+ E Sbjct: 433 TLVESAGETMAEIVSAVTRVTDIMGEIASASDEQSRGIDQVGLAVAEMDRVTQQNAALVE 492 Query: 514 ELSATSEEMSAQAIHLQDLMRFFQVGEPRKSAPRASKAV-PLPPSGGKSDSVRRLSMLDA 572 E +A + + QA L + + F++ + ++ K V P P R++++ D+ Sbjct: 493 ESAAAAAALEEQASRLTEAVAVFRIQQQQRETSAVVKTVTPAAP--------RKMAVADS 544 Query: 573 PED 575 E+ Sbjct: 545 EEN 547