BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0137.p (122 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA0179 [T] COG0784 FOG Pae Pseudomonas aeruginosa 139 1e-33 VCA1096 [T] COG0784 FOG Vch Vibrio cholerae 129 1e-30 CC0432 [T] COG0784 FOG Ccr Caulobacter vibrioides 106 1e-23 RSp1409 [T] COG0784 FOG Rso Ralstonia solanacearum 106 2e-23 BB0570 Non COG 105 4e-23 SMc03006 [T] COG0784 FOG Sme Sinorhizobium meliloti 103 1e-22 AGc909 [T] COG0784 FOG Atu Agrobacterium tumefaciens strain C58 ... 100 1e-21 all1068_2 [T] COG0784 FOG Nos Nostoc sp. PCC 7120 97 1e-20 sll0043_4 [T] COG0784 FOG Syn Synechocystis 87 8e-18 all2161_2 [T] COG0784 FOG Nos Nostoc sp. PCC 7120 85 4e-17 >PA0179 [T] COG0784 FOG Pae Pseudomonas aeruginosa Length = 121 Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 64/122 (52%), Positives = 89/122 (72%), Gaps = 1/122 (0%) Query: 1 MEKNILIVDDSFSLRQTISAALKSAGYHVEEAADGKQALAHLDGRKFNLVISDLNMPHLD 60 M K ILIVDDS S+RQ +S LKSAGY V+EAADGK+ L + ++LV +D NMP++D Sbjct: 1 MGKPILIVDDSASIRQMLSFTLKSAGYEVDEAADGKEGLGKAQSKSYSLVFTDQNMPNMD 60 Query: 61 GLSFVREMKQMPAYKFTPVIMLTTESSEARKQEGKAAGIRAWVHKPFQPPVLLDAVAKLI 120 GLS +R ++ + Y+ P++MLTTESS+A KQ+G++AG W+ KPF PP LL+ V + + Sbjct: 61 GLSLIRSLRNLAGYRSVPILMLTTESSDAMKQQGRSAGATGWLVKPFDPPKLLE-VTRKV 119 Query: 121 LP 122 LP Sbjct: 120 LP 121 >VCA1096 [T] COG0784 FOG Vch Vibrio cholerae Length = 125 Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 57/116 (49%), Positives = 81/116 (69%) Query: 5 ILIVDDSFSLRQTISAALKSAGYHVEEAADGKQALAHLDGRKFNLVISDLNMPHLDGLSF 64 +L VDDS S+RQ +S L+ AGY VE AADG++ALA +F+++ISD+NMP + G F Sbjct: 10 VLAVDDSISIRQMVSHTLQDAGYEVETAADGREALAKAQKARFDVIISDVNMPVMTGFEF 69 Query: 65 VREMKQMPAYKFTPVIMLTTESSEARKQEGKAAGIRAWVHKPFQPPVLLDAVAKLI 120 V+ ++ YKFTP++MLTTE+S +KQEGKA G W+ KPF P LL + +++ Sbjct: 70 VKAVRMQSQYKFTPILMLTTETSPEKKQEGKAVGATGWLVKPFNPETLLKTLQRVL 125 >CC0432 [T] COG0784 FOG Ccr Caulobacter vibrioides Length = 121 Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 47/119 (39%), Positives = 75/119 (63%) Query: 1 MEKNILIVDDSFSLRQTISAALKSAGYHVEEAADGKQALAHLDGRKFNLVISDLNMPHLD 60 M + +L VDDS ++R + AL AG++V EA DG+ L L + +++I+D+NMP LD Sbjct: 1 MTRTVLTVDDSRTMRDMLRMALAGAGFNVVEAVDGEHGLEVLSAHRPDVIITDINMPKLD 60 Query: 61 GLSFVREMKQMPAYKFTPVIMLTTESSEARKQEGKAAGIRAWVHKPFQPPVLLDAVAKL 119 G F+ ++ Y+ P+++LTTES A+KQ + AG W+ KPF P L+DA+ ++ Sbjct: 61 GFGFIEAVRVDDDYRAIPILVLTTESDPAKKQRAREAGATGWIVKPFNPEKLVDAIRRV 119 >RSp1409 [T] COG0784 FOG Rso Ralstonia solanacearum Length = 137 Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 53/123 (43%), Positives = 81/123 (65%), Gaps = 5/123 (4%) Query: 2 EKNILIVDDSFSLRQTISAALKSAGYHVEEAADGKQALAHL----DGRKFNLVISDLNMP 57 EK+IL+VDDS S+R+ I+ L++ G+ V EA DG AL + DG +LVI+D MP Sbjct: 3 EKHILVVDDSTSIRRMIATCLRACGFAVTEATDGAAALEAVQRQADG-SHHLVITDQVMP 61 Query: 58 HLDGLSFVREMKQMPAYKFTPVIMLTTESSEARKQEGKAAGIRAWVHKPFQPPVLLDAVA 117 +DGL+ +R ++ +PAY TP++MLTTE+ + + +AAG ++ KPF P L D+V Sbjct: 62 AMDGLTLIRALRTLPAYADTPILMLTTEADSTIRDQARAAGATGFLPKPFDPDGLTDSVM 121 Query: 118 KLI 120 +L+ Sbjct: 122 QLL 124 >BB0570 Non COG Length = 124 Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 47/126 (37%), Positives = 85/126 (67%), Gaps = 10/126 (7%) Query: 1 MEKNILIVDDSFSLRQTISAALKSAGYHVEEAADG-------KQALAHLDGRKFNLVISD 53 M+K IL++DD+ ++RQ+++ L+ G+ V EA DG K+A+ D + F+LVI+D Sbjct: 1 MKKRILVIDDNRAIRQSVAYILEQNGFGVSEAKDGLEGVLRFKEAVGQGD-KDFDLVITD 59 Query: 54 LNMPHLDGLSFVREMKQMPAYKFTPVIMLTTESSEARKQEGKAAGIRAWVHKPFQPPVLL 113 +NMP+LDG+ ++++++ + F P+++LTTES +++ EG+ AG W+ KPF P L+ Sbjct: 60 INMPNLDGIGVIKQIREFGS--FVPILVLTTESEQSKVDEGRKAGATGWLVKPFNPEALM 117 Query: 114 DAVAKL 119 ++K+ Sbjct: 118 KTISKI 123 >SMc03006 [T] COG0784 FOG Sme Sinorhizobium meliloti Length = 121 Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 43/119 (36%), Positives = 73/119 (61%) Query: 1 MEKNILIVDDSFSLRQTISAALKSAGYHVEEAADGKQALAHLDGRKFNLVISDLNMPHLD 60 M+K +L VDDS ++R + L +AG+ +A DG + L LD +++++D+NMP LD Sbjct: 1 MKKRVLTVDDSRTIRNMLLVTLNNAGFETIQAEDGVEGLEKLDTANPDVIVTDINMPRLD 60 Query: 61 GLSFVREMKQMPAYKFTPVIMLTTESSEARKQEGKAAGIRAWVHKPFQPPVLLDAVAKL 119 G F+ +++ Y+ P+++LTTES +K + AG W+ KPF P L+DA+ ++ Sbjct: 61 GFGFIEGVRKNDRYRAVPILVLTTESDAEKKNRARQAGATGWIVKPFDPTKLIDAIERV 119 >AGc909 [T] COG0784 FOG Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 121 Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 42/119 (35%), Positives = 73/119 (61%) Query: 1 MEKNILIVDDSFSLRQTISAALKSAGYHVEEAADGKQALAHLDGRKFNLVISDLNMPHLD 60 M+K +L VDDS ++R + L +AG+ +A DG + L L+ +++++D+NMP LD Sbjct: 1 MKKKVLTVDDSRTIRNMLLVTLNNAGFETIQAEDGIEGLEVLEQSNPDVIVTDINMPRLD 60 Query: 61 GLSFVREMKQMPAYKFTPVIMLTTESSEARKQEGKAAGIRAWVHKPFQPPVLLDAVAKL 119 G F+ +++ Y+ P+++LTTES +K + AG W+ KPF P L+DA+ ++ Sbjct: 61 GFGFIEGVRRNEKYRAIPILVLTTESDAEKKNRARQAGATGWIVKPFDPAKLIDAIERV 119 >all1068_2 [T] COG0784 FOG Nos Nostoc sp. PCC 7120 Length = 167 Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 48/121 (39%), Positives = 75/121 (61%), Gaps = 1/121 (0%) Query: 1 MEKNILIVDDSFSLRQTISAALKSAGYHVEEAADGKQALAHLDGR-KFNLVISDLNMPHL 59 + K IL+VDD+ SLRQT+S L+ +GY V +A +G +AL L + LV+SDL MP + Sbjct: 34 LSKVILVVDDAISLRQTLSLTLQKSGYQVIQAQNGAEALEQLQRHPEIQLVVSDLEMPRM 93 Query: 60 DGLSFVREMKQMPAYKFTPVIMLTTESSEARKQEGKAAGIRAWVHKPFQPPVLLDAVAKL 119 +G F+ ++ P Y PVI+LT+ S+E +Q K G +A++ KP+ L++ + L Sbjct: 94 NGFEFLSHIQHNPQYTKIPVIILTSRSAEKHRQLAKELGAKAYLSKPYLEHELINHIESL 153 Query: 120 I 120 I Sbjct: 154 I 154 >sll0043_4 [T] COG0784 FOG Syn Synechocystis Length = 142 Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 46/119 (38%), Positives = 72/119 (60%), Gaps = 1/119 (0%) Query: 3 KNILIVDDSFSLRQTISAALKSAGYHVEEAADGKQALAHL-DGRKFNLVISDLNMPHLDG 61 K IL+VDDS +LR+T++ L+ +GY V +A DG++AL L + +L+I D+ MP+L+G Sbjct: 15 KTILVVDDSAALRRTLAFTLERSGYRVMQAKDGQEALKTLAQAGEVDLIICDVEMPNLNG 74 Query: 62 LSFVREMKQMPAYKFTPVIMLTTESSEARKQEGKAAGIRAWVHKPFQPPVLLDAVAKLI 120 F+ + ++ P PV MLT+ SE +Q K G A+ KP+ L AV +L+ Sbjct: 75 FEFLGQRRRNPDLLKIPVAMLTSRGSEKHRQLAKTLGANAYFTKPYIEQQFLGAVQELL 133 >all2161_2 [T] COG0784 FOG Nos Nostoc sp. PCC 7120 Length = 138 Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 46/118 (38%), Positives = 65/118 (55%), Gaps = 1/118 (0%) Query: 5 ILIVDDSFSLRQTISAALKSAGYHVEEAADGKQALAHLD-GRKFNLVISDLNMPHLDGLS 63 ILI+DDS ++R+ ++ L+ GY VE+A DG+ A L+ G K VI D+ MP LDG Sbjct: 15 ILIIDDSINVRRFLALTLEKGGYQVEQAKDGEDAWEKLESGLKVKAVICDIEMPRLDGYG 74 Query: 64 FVREMKQMPAYKFTPVIMLTTESSEARKQEGKAAGIRAWVHKPFQPPVLLDAVAKLIL 121 F+ + K PV MLT+ SS +Q G RA+ KP+ LL + +LI Sbjct: 75 FLDRINSNLETKNIPVAMLTSRSSNKHRQLAMQLGARAYFSKPYNEQELLGTLEELIF 132