BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0034.p (525 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CC1017_1 [QR] COG0500 SAM-dependent methyltransferases Ccr Caulo... 278 3e-74 CC3341_1 [QR] COG0500 SAM-dependent methyltransferases Ccr Caulo... 263 5e-70 sll1526_1 [QR] COG0500 SAM-dependent methyltransferases Syn Syne... 203 1e-51 CC1017_2 Non COG 170 9e-42 sll1526_2 Non COG 155 3e-37 CC3341_2 Non COG 112 2e-24 RP028 [QR] COG0500 SAM-dependent methyltransferases Rpr Ricketts... 89 3e-17 RC0031_1 [QR] COG0500 SAM-dependent methyltransferases Rco Ricke... 88 5e-17 RC1221_1 [QR] COG0500 SAM-dependent methyltransferases Rco Ricke... 84 1e-15 RP789_1 [QR] COG0500 SAM-dependent methyltransferases Rpr Ricket... 79 4e-14 >CC1017_1 [QR] COG0500 SAM-dependent methyltransferases Ccr Caulobacter vibrioides Length = 295 Score = 278 bits (711), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 133/250 (53%), Positives = 166/250 (66%), Gaps = 3/250 (1%) Query: 4 WNDGYVVDIAYTYGYYPGMNPARLPLAFAFHGLQAPTVQTACELGFGQGLSSNIHAAAST 63 W+ GYV D+ YT+GYY +NP R L G AP ++ ACELGFGQGLS +IHAAA Sbjct: 48 WSAGYVTDVNYTFGYYGELNPLRCRLPLLTVGRHAPKIENACELGFGQGLSVSIHAAAQP 107 Query: 64 -TRWWGNDFNPRQAAFAQELAASSGSGAQLEDSSFSRFCRRDDLPDFDFIALHGIWSWVS 122 W+G DFNP QAAFA E+ SG+ A+L D +F+ FC R DLPDFDFI LHGIW+W+S Sbjct: 108 GINWYGTDFNPSQAAFAAEMVRLSGAEAKLYDEAFAEFCNRKDLPDFDFIGLHGIWTWIS 167 Query: 123 QENRDIIFDFIDRKLKPGGVLYISYNTQPGWSAFMPLRELLVQHTQQSGNEEQGLPTAAR 182 +NR ++ DFI RKL+PGGVLYISYNT PGWS+ P+R L+ +H G QG+ + Sbjct: 168 DQNRHVLVDFIRRKLRPGGVLYISYNTLPGWSSSAPIRHLMKRHADVMGAPGQGV--IGQ 225 Query: 183 IDAALAFAARLFEADPVYAQANPFMRDRLKVLQQQSRSYLAHEYFNRDWHVESFADMHRR 242 DAAL F + DP+YA+ NP +RLK ++ Q R YLAHEY NRDWH FAD+ Sbjct: 226 TDAALNFIDQFLALDPLYAKVNPGAVERLKQVKAQDRKYLAHEYMNRDWHPMYFADVENW 285 Query: 243 FSGAGLEFAC 252 A + FAC Sbjct: 286 LGDAKVGFAC 295 >CC3341_1 [QR] COG0500 SAM-dependent methyltransferases Ccr Caulobacter vibrioides Length = 275 Score = 263 bits (673), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 128/254 (50%), Positives = 166/254 (65%), Gaps = 3/254 (1%) Query: 3 NWNDGYVVDIAYTYGYYPGMNPARLPLAFAFHGLQAPTVQTACELGFGQGLSSNIHAAAS 62 +W+ GYVV+ YTYG YP +NP R L G +AP ++TACELGFGQG S+ +HAA Sbjct: 22 DWSAGYVVETGYTYGCYPELNPVRAALPLLAKGFRAPKIETACELGFGQGCSAAVHAATQ 81 Query: 63 T-TRWWGNDFNPRQAAFAQELAASSGSGAQLEDSSFSRFCRRDDLPDFDFIALHGIWSWV 121 WWG DF P QA FA++L A+SG+ A D +F F R LP+FDF+ALHG+WSWV Sbjct: 82 PDIEWWGCDFAPAQAVFARDLVAASGARANFFDDAFDEFAERPGLPEFDFVALHGVWSWV 141 Query: 122 SQENRDIIFDFIDRKLKPGGVLYISYNTQPGWSAFMPLRELLVQHTQQSGNEEQGLPTAA 181 + RD I F+ R+LKPGG++YISYNTQPGW+ PLR L+ +H + G GL AA Sbjct: 142 NDAARDKIVAFLRRRLKPGGLVYISYNTQPGWALAGPLRHLMKRHAETLG--APGLGPAA 199 Query: 182 RIDAALAFAARLFEADPVYAQANPFMRDRLKVLQQQSRSYLAHEYFNRDWHVESFADMHR 241 +DAAL+ R F+ DPVY++ N + DRL + +Q R+YL HEY NRDW FA++ Sbjct: 200 NLDAALSTMKRFFDLDPVYSRINSGVTDRLAAVMRQDRAYLVHEYMNRDWVPMWFAEVEA 259 Query: 242 RFSGAGLEFACPAH 255 R S A L FA A+ Sbjct: 260 RLSSAKLSFAASAY 273 >sll1526_1 [QR] COG0500 SAM-dependent methyltransferases Syn Synechocystis Length = 250 Score = 203 bits (516), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 100/252 (39%), Positives = 156/252 (61%), Gaps = 11/252 (4%) Query: 4 WNDGYVVDIAYTYGYYPGMNPARLPLAFAFHGLQAPTVQ---TACELGFGQGLSSNIHAA 60 WN+GYV+++ YTYG+Y ++P +L LA L++P ++ CEL G+G S+N+ A+ Sbjct: 3 WNEGYVLEVNYTYGFYGELSPLKLALANTLKSLKSPNLEKNFNYCELACGRGYSTNLLAS 62 Query: 61 A-STTRWWGNDFNPRQAAFAQELAASSGS-GAQLEDSSFSRFCRRDDLPDFDFIALHGIW 118 +++ NDFNP A+ LA ++G+ D SF F +D LP FDFI LHGI+ Sbjct: 63 CYPQAQFYANDFNPSHIVEARTLAETAGTKNVHFFDDSFEEFINQD-LPQFDFIVLHGIY 121 Query: 119 SWVSQENRDIIFDFIDRKLKPGGVLYISYNTQPGWSAFMPLRELLVQHTQQSGNEEQGLP 178 SW++ NR I +FI +K+K GG++YISYNT PGW+A P++ L++++ + S P Sbjct: 122 SWITPRNRQAIVNFIRQKIKVGGMVYISYNTLPGWAAARPMQALMLRYGRNSSE-----P 176 Query: 179 TAARIDAALAFAARLFEADPVYAQANPFMRDRLKVLQQQSRSYLAHEYFNRDWHVESFAD 238 +RI+ AL F ++ E+ Y NP ++ RL+ L++Q+R YLAHEYFN +W+ F + Sbjct: 177 ILSRIEKALDFTEQMLESKANYFTQNPILKPRLEKLKEQNRYYLAHEYFNEEWNAFYFDE 236 Query: 239 MHRRFSGAGLEF 250 + + A L F Sbjct: 237 VAKELEEAKLNF 248 >CC1017_2 Non COG Length = 259 Score = 170 bits (430), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 91/271 (33%), Positives = 159/271 (58%), Gaps = 13/271 (4%) Query: 254 AHYVDHLDMANLTPAQRQQLYEITDPVLQQSVRDFMVNQQFRRDYWVRGAQALDDRQRVQ 313 AH +D+L N+TP Q + + +++D L++++RDF +NQQFRRDYWVRG +AL ++V Sbjct: 2 AHVLDNLYDLNMTPQQTEFMRDVSDVSLRETIRDFCMNQQFRRDYWVRGVRALIGHEQVA 61 Query: 314 ALALQSVILLTEPDKVPLTIQNVASEITLNRLIYEPILQALSDYQPHTLVDLAASLAHRN 373 A+ + V++ +P ++ V E TLN +Y+P+ + L D++PH++++L LA ++ Sbjct: 62 AMREERVVMTVAQADLPTKVRGVIGEATLNDDVYQPLFEILLDHKPHSVLELETHLASKS 121 Query: 374 LNLAQVLDSVLMLIGTGHAAPLPAEPDAAARAQIERRTGDLNAWLLQRAALASPAGEQGE 433 L+ Q+ ++ +L+G G A D ++ + RT LN + +R+ Sbjct: 122 LHFGQLSSALTILLGLGVITTAAAAQDV---SKAKARTLALNKTIARRSL---------S 169 Query: 434 EGEITHLSSPVIGGGVRVDRVEQLFLLARQSCGDDVDAWPAQVWRYIAAQGKRLLREGVR 493 G+I + +SP+ GGG+ R QLF L+RQ+ G + W + ++ + QG+ ++++G Sbjct: 170 VGDIAYFASPITGGGITASRFAQLFWLSRQNGGKTAEDWASFAYQVLQGQGQAIIKDGAT 229 Query: 494 LEGEAENLAELATQARLFARTRLPLLKALGV 524 L+GE +NL EL QA + LP+ ALGV Sbjct: 230 LQGE-DNLTELRAQATHWGAHVLPIWNALGV 259 >sll1526_2 Non COG Length = 256 Score = 155 bits (391), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 93/271 (34%), Positives = 148/271 (54%), Gaps = 17/271 (6%) Query: 254 AHYVDHLDMANLTPAQRQQLYEITDPVLQQSVRDFMVNQQFRRDYWVRGAQALDDRQRVQ 313 AH +D++D NL+ A + QL ++TDP ++ VRDF +N QFRRD +VRG AL ++ +Q Sbjct: 2 AHLIDYVDAVNLSSAAQTQLSQVTDPTFREVVRDFFLNTQFRRDIFVRGKLALLPQEHLQ 61 Query: 314 ALALQSVILLTEPDKVPLTIQNVASEITLNRLIYEPILQALSDYQPHTLVDLAASLAHRN 373 AL L+ + L Q E+ L +Y PI +AL + P TL +L + Sbjct: 62 ALGNLRFALVVPIKSIKLKQQFPLGEVELQEKVYRPICEALEN-GPLTLGELQKDSKTKG 120 Query: 374 LNLAQVLDSVLMLIGTGHAAPLPAEPDAAARAQIERRTGDLNAWLLQRAALASPAGEQGE 433 + L + +++++ G G+ P E R Q ++ T N+ + ++ + Sbjct: 121 ITLNSLYQALIIMTGIGYTHPAVNE---TVRKQRQKSTDAFNSAVKTKSLYSD------- 170 Query: 434 EGEITHLSSPVIGGGVRVDRVEQLFLLARQSCGDDVDAWPAQVWRYIAAQGKRLLREGVR 493 E+ L+SP++G G+ V+R+EQL LLA++ D P VW+ +++QGK++++EG Sbjct: 171 --EMAFLASPLVGTGIAVNRLEQLLLLAKERKQD----GPQFVWQVLSSQGKKIIKEGKT 224 Query: 494 LEGEAENLAELATQARLFARTRLPLLKALGV 524 LE EAENL L A F RLPLL LG+ Sbjct: 225 LETEAENLEHLKNVAENFNGDRLPLLTKLGI 255 >CC3341_2 Non COG Length = 253 Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 89/268 (33%), Positives = 134/268 (50%), Gaps = 15/268 (5%) Query: 258 DHLDMANLTPAQRQQLYEITDPVLQQSVRDFMVNQQFRRDYWVRGAQALDDRQRVQALAL 317 DH+D NL+P L E+ DP L+++ RDF V QFRRDYW+RGA AL + +A+ Sbjct: 1 DHVDELNLSPDMIGFLRELPDPSLRETFRDFAVQAQFRRDYWLRGASALTAADQRRAIRD 60 Query: 318 QSVILLTEPDKVPLTIQNVASEITLNRLIYEPILQALSDYQPHTLVDLAASLAHRNLNLA 377 Q V L + P + +E+ + +E I L+D +P T+ D+ A+L + L Sbjct: 61 QRVALARPAAEWPDKARGTFAEMVMGGPAHEAIRDLLADGRPRTIGDIEAALPEGS-TLP 119 Query: 378 QVLDSVLMLIGTGHAAPLPAEPDAAARAQIERRTGDLNAWLLQRAALASPAGEQGEEGEI 437 Q+ ++++L+ G P + A A A+ LN L +RA E ++ Sbjct: 120 QLTTALILLMSQGAVQPAQS---ADATARAAGTARALNRELARRAV---------ESTDL 167 Query: 438 THLSSPVIGGGVRVDRVEQLFLLARQSCGDDVDAWPAQVWRYIAAQGKRLLREGVRLEGE 497 + L++P GG V R Q+F LA Q G + W + +A QG+ L+ +G L GE Sbjct: 168 SFLAAPATGGSVGASRFHQMFWLALQEGGGPRE-WASFAANTLAQQGQALVVDGAPLGGE 226 Query: 498 AENLAELATQARLFARTRLPLLKALGVV 525 A A L QA FA T LP + LG+ Sbjct: 227 AAT-AALHGQAVSFADTVLPCWRGLGIA 253 >RP028 [QR] COG0500 SAM-dependent methyltransferases Rpr Rickettsia prowazekii Length = 250 Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 17/200 (8%) Query: 35 GLQAPTVQTACELGFGQGLSSNIHAAAST---TRWWGNDFNPRQAAFAQELAASSGSGAQ 91 GL P ++TA L G G+ N+ A T ++ G D + Q E+ + S A+ Sbjct: 36 GLNPPPLETAKILDIGCGVGVNLLNFAETYPKSQSLGVDLSKTQI----EIGKKTISDAK 91 Query: 92 LED---SSFSRFCRRDDLPDFDFIALHGIWSWVSQENRDIIFDFIDRKLKPGGVLYISYN 148 +++ + S + FD+I HG++SWVS+E +D I + +++ L P G+ +ISYN Sbjct: 92 IKNVRLKALSILDLDESYGKFDYIVCHGVYSWVSKEVQDKILEVLNKLLNPNGIAFISYN 151 Query: 149 TQPGWSAFMPLRELLVQHTQQSGNEEQGLPTAARIDAALAFAARLFEADPV-YAQANPFM 207 T PGW+ +RE+++ H++ L + + L F E YA F+ Sbjct: 152 TLPGWNMQNTIREMMMFHSESFNTSHDKLQQSKLL---LKFINDSLENSTTPYAN---FL 205 Query: 208 RDRLKVLQQQSRSYLAHEYF 227 R+ K++ + SY+ HEY Sbjct: 206 REEAKLISTYADSYVLHEYL 225 >RC0031_1 [QR] COG0500 SAM-dependent methyltransferases Rco Rickettsia conorii Length = 250 Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 16/219 (7%) Query: 14 YTYGYYPGMNPARLPLAFAFHGLQAPTVQTACELGFGQGLSSNIHAAAST---TRWWGND 70 +T+ Y +P L GL P ++TA L G G+ N+ A T ++ G D Sbjct: 18 FTFSY---TSPPYLRTIGKLFGLNPPPLETAKILELGCGIGVNLLNFAETYPKSQSLGVD 74 Query: 71 FNPRQAAFAQELAAS-SGSGAQLEDSSFSRFCRRDDLPDFDFIALHGIWSWVSQENRDII 129 + Q +++ + A+L+ + S + FD+I HG++SWV +E +D I Sbjct: 75 LSKTQIELGKKIISDLKIKNAELK--ALSILDLDESYGKFDYIVCHGVYSWVPEEVQDKI 132 Query: 130 FDFIDRKLKPGGVLYISYNTQPGWSAFMPLRELLVQHTQQSGNEEQGLPTAARIDAALAF 189 ++ L P G+ ++SYNT PGW+ +RE+++ H++ L A + L F Sbjct: 133 LKVCNKLLNPNGIAFVSYNTLPGWNMQRTIREMIMFHSEPFNTSHDKLQQAKLL---LKF 189 Query: 190 AARLFEADPV-YAQANPFMRDRLKVLQQQSRSYLAHEYF 227 E+ Y+ F+RD K+L + SY+ HEY Sbjct: 190 INDSLESSTTPYSN---FLRDETKLLSAYTDSYVLHEYL 225 >RC1221_1 [QR] COG0500 SAM-dependent methyltransferases Rco Rickettsia conorii Length = 279 Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 67/243 (27%), Positives = 108/243 (44%), Gaps = 22/243 (9%) Query: 11 DIAYTYGYYPGMNPARLPLAFAFHGLQAPTVQTACELGFGQGLSSNI--HAAASTTRWW- 67 +I Y Y +P L G+ AP V+ A L G N+ HA ++ Sbjct: 41 EIPYESYPYALTHPYHLSTLATLFGVNAPEVENAKILELGCAAGGNLIPHAVLYPKAYFV 100 Query: 68 GNDFNPRQAAFAQELAASSGSGAQLEDSSFSRFCRRDDLPD----FDFIALHGIWSWVSQ 123 G D + Q A + + G L++ F C D+ D FD+I HG+ SWV + Sbjct: 101 GVDLSKVQIDEANKNVKALG----LKNIEFHH-CSITDINDSFGKFDYIICHGVISWVPK 155 Query: 124 ENRDIIFDFIDRKLKPGGVLYISYNTQPGWSAFMPLRELLVQHTQQSGNEEQGLPTAARI 183 RD IF+ ++ L P G+ YISYNT PGW+ +R++++ H+ N + A+ Sbjct: 156 TVRDKIFEVCNKNLSPNGIAYISYNTLPGWNMVRTIRDMMMYHSSSFANVRDRI---AQS 212 Query: 184 DAALAFAARLFEADPV-YAQANPFMRDRLKVLQQQSRSYLAHEYF---NRDWHVESFADM 239 L F E YA+A ++ +L +Q+ YL H++ N ++ F + Sbjct: 213 RLLLEFVKDSLENSKTPYAEA---LKTEAGLLAKQTDHYLRHDHLEEENAQFYFHEFMNE 269 Query: 240 HRR 242 R+ Sbjct: 270 ARK 272 >RP789_1 [QR] COG0500 SAM-dependent methyltransferases Rpr Rickettsia prowazekii Length = 278 Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 64/235 (27%), Positives = 101/235 (42%), Gaps = 22/235 (9%) Query: 19 YPGMNPARLPLAFAFHGLQAPTVQTACELGFGQGLSSNI--HAAA-STTRWWGNDFNPRQ 75 Y NP L G+ AP V+ + L G N+ HA + G D + Q Sbjct: 48 YAITNPYHLSTLATLFGINAPEVENSKILELGCAAGGNLIPHAVLYPNAHFVGVDLSKVQ 107 Query: 76 AAFAQELAASSGSGAQLEDSSFSRFCRRDDLPD----FDFIALHGIWSWVSQENRDIIFD 131 A + + G L++ F C D+ D FD+I HG+ SWV + RD IF Sbjct: 108 IDEANKNVRALG----LKNIEFHH-CSITDIDDSFGKFDYIICHGVISWVPKIVRDKIFK 162 Query: 132 FIDRKLKPGGVLYISYNTQPGWSAFMPLRELLVQHTQQSGNEEQGLPTAARIDAALAFAA 191 +R L G+ YISYNT PGW+ +R++++ H+ N + A+ L F Sbjct: 163 VCNRNLSTNGIAYISYNTLPGWNMVRTIRDMMLYHSSSFTNIRDRI---AQSRLLLEFVK 219 Query: 192 RLFEADPV-YAQANPFMRDRLKVLQQQSRSYLAHEYF---NRDWHVESFADMHRR 242 E YA+ ++ +L +Q+ YL H++ N ++ F + R+ Sbjct: 220 DSLEHSKTPYAEV---LKTEAGLLAKQTDHYLRHDHLEEENAQFYFHEFMNEARK 271