BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0038.p (88 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2556 [J] COG0268 Ribosomal protein S20 Rso Ralstonia solanace... 130 9e-31 NMB0463 [J] COG0268 Ribosomal protein S20 Nme Neisseria meningit... 117 5e-27 NMA2022 [J] COG0268 Ribosomal protein S20 NmA Neisseria meningit... 117 5e-27 PA4563 [J] COG0268 Ribosomal protein S20 Pae Pseudomonas aeruginosa 92 3e-19 HI0965 [J] COG0268 Ribosomal protein S20 Hin Haemophilus influenzae 79 2e-15 YPO0472 [J] COG0268 Ribosomal protein S20 Ype Yersinia pestis 78 6e-15 XF2421 [J] COG0268 Ribosomal protein S20 Xfa Xylella fastidiosa ... 78 6e-15 STM0043 [J] COG0268 Ribosomal protein S20 Sty Salmonella typhimu... 77 8e-15 PM1659 [J] COG0268 Ribosomal protein S20 Pmu Pasteurella multocida 77 1e-14 rpsT [J] COG0268 Ribosomal protein S20 Eco Escherichia coli K12 77 1e-14 >RSc2556 [J] COG0268 Ribosomal protein S20 Rso Ralstonia solanacearum Length = 88 Score = 130 bits (326), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 70/88 (79%), Positives = 79/88 (89%) Query: 1 MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60 MANTAQARKRARQAV QNAHNS+ RS LRTA+KAVRKAIA GDKAAA +VF+ + STIDS Sbjct: 1 MANTAQARKRARQAVVQNAHNSALRSRLRTAVKAVRKAIAGGDKAAAANVFKQAQSTIDS 60 Query: 61 IADKKIIHKNKAARHKSRLAAALKALAA 88 IADKKI+HKNKAAR KSRL+AA+KA+ A Sbjct: 61 IADKKIVHKNKAARAKSRLSAAIKAMGA 88 >NMB0463 [J] COG0268 Ribosomal protein S20 Nme Neisseria meningitidis MC58 Length = 87 Score = 117 bits (294), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 61/87 (70%), Positives = 72/87 (82%) Query: 1 MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60 MAN+AQARKRARQ+VKQ AHN+S R+ RTA+K V KA+ AGDKAAA +V+Q SV ID Sbjct: 1 MANSAQARKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDKAAAQAVYQESVKVIDR 60 Query: 61 IADKKIIHKNKAARHKSRLAAALKALA 87 IADK + HKNKAARHKSRL+A +KALA Sbjct: 61 IADKGVFHKNKAARHKSRLSAKVKALA 87 >NMA2022 [J] COG0268 Ribosomal protein S20 NmA Neisseria meningitidis Z2491 Length = 87 Score = 117 bits (294), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 61/87 (70%), Positives = 72/87 (82%) Query: 1 MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60 MAN+AQARKRARQ+VKQ AHN+S R+ RTA+K V KA+ AGDKAAA +V+Q SV ID Sbjct: 1 MANSAQARKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDKAAAQAVYQESVKVIDR 60 Query: 61 IADKKIIHKNKAARHKSRLAAALKALA 87 IADK + HKNKAARHKSRL+A +KALA Sbjct: 61 IADKGVFHKNKAARHKSRLSAKVKALA 87 >PA4563 [J] COG0268 Ribosomal protein S20 Pae Pseudomonas aeruginosa Length = 91 Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 51/87 (58%), Positives = 64/87 (73%) Query: 1 MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60 MANT A+KRA+QA K+ +HN+S RS +RT IK V KAI A D A + F ++V ID Sbjct: 1 MANTPSAKKRAKQAEKRRSHNASLRSMVRTYIKNVVKAIDAKDLEKAQAAFTAAVPVIDR 60 Query: 61 IADKKIIHKNKAARHKSRLAAALKALA 87 +ADK IIHKNKAARHKSRL+ +KAL+ Sbjct: 61 MADKGIIHKNKAARHKSRLSGHIKALS 87 >HI0965 [J] COG0268 Ribosomal protein S20 Hin Haemophilus influenzae Length = 89 Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 44/87 (50%), Positives = 59/87 (67%) Query: 1 MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60 +AN A+KRA Q+ K+ HN+SQRS +RT IK V +AAG+K+AA + F +D Sbjct: 3 LANIKSAKKRAVQSEKRRQHNASQRSMMRTYIKKVYAQVAAGEKSAAEAAFVEMQKVVDR 62 Query: 61 IADKKIIHKNKAARHKSRLAAALKALA 87 +A K +IH NKAA HKS+LAA +K LA Sbjct: 63 MASKGLIHANKAANHKSKLAAQIKKLA 89 >YPO0472 [J] COG0268 Ribosomal protein S20 Ype Yersinia pestis Length = 87 Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 45/86 (52%), Positives = 56/86 (65%) Query: 1 MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60 MAN A+KRA Q+ K+ HN+S+RS +RT IK V AIAAGDK AA F +D Sbjct: 1 MANIKSAKKRAVQSEKRRKHNASRRSMVRTFIKKVYAAIAAGDKDAAQKAFNEMQPIVDR 60 Query: 61 IADKKIIHKNKAARHKSRLAAALKAL 86 + K +IHKNKAARHKS L A + A+ Sbjct: 61 QSCKGLIHKNKAARHKSNLVAQINAM 86 >XF2421 [J] COG0268 Ribosomal protein S20 Xfa Xylella fastidiosa 9a5c Length = 109 Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 42/86 (48%), Positives = 58/86 (67%) Query: 1 MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60 +AN A+KR +Q V +N N++QRS LRTA+K V KA++ D A A + F + +D Sbjct: 21 VANIKSAKKRVKQTVVRNERNTAQRSMLRTAVKKVIKALSIKDIAGAETAFAVAQPILDR 80 Query: 61 IADKKIIHKNKAARHKSRLAAALKAL 86 + + +IHKNKAARHKSRL A +KAL Sbjct: 81 FSSRGLIHKNKAARHKSRLTARIKAL 106 >STM0043 [J] COG0268 Ribosomal protein S20 Sty Salmonella typhimurium LT2 Length = 87 Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 46/87 (52%), Positives = 55/87 (63%) Query: 1 MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60 MAN A+KRA Q+ K HN+S+RS +RT IK V AI AGDKAAA F +D Sbjct: 1 MANIKSAKKRAVQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAALKAFNEMQPIVDR 60 Query: 61 IADKKIIHKNKAARHKSRLAAALKALA 87 A K +IHKNKAARHK+ L A + LA Sbjct: 61 QAAKGLIHKNKAARHKANLTAQINKLA 87 >PM1659 [J] COG0268 Ribosomal protein S20 Pmu Pasteurella multocida Length = 89 Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 43/87 (49%), Positives = 57/87 (65%) Query: 1 MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60 +AN A+KRA Q+ K+ HN+SQRS +RT IK V A+AAGDK+ A F +D Sbjct: 3 LANIKSAKKRAIQSEKRRQHNASQRSMMRTYIKKVYAAVAAGDKSVAEKAFVEMQKVVDR 62 Query: 61 IADKKIIHKNKAARHKSRLAAALKALA 87 +A K +IH NKAA HK+ L+A +K LA Sbjct: 63 MASKGLIHANKAANHKANLSAQIKKLA 89 >rpsT [J] COG0268 Ribosomal protein S20 Eco Escherichia coli K12 Length = 87 Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 46/87 (52%), Positives = 55/87 (63%) Query: 1 MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60 MAN A+KRA Q+ K HN+S+RS +RT IK V AI AGDKAAA F +D Sbjct: 1 MANIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDR 60 Query: 61 IADKKIIHKNKAARHKSRLAAALKALA 87 A K +IHKNKAARHK+ L A + LA Sbjct: 61 QAAKGLIHKNKAARHKANLTAQINKLA 87